RNA–Protein interactions for RNA: ENST00000463511.1

SSNA1-203, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2

Gene SSNA1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-203ENST00000463511 TREML2Q5T2D2 321 aa28.58■■■□□ 2.17
SSNA1-203ENST00000463511 UBE2Q1Q7Z7E8 422 aa28.58■■■□□ 2.17
SSNA1-203ENST00000463511 XPO5Q9HAV4 1204 aaKnown RBP eCLIP28.58■■■□□ 2.17
SSNA1-203ENST00000463511 NPM3O75607 178 aaKnown RBP28.57■■■□□ 2.16
SSNA1-203ENST00000463511 TRIM27P14373 513 aa28.57■■■□□ 2.16
SSNA1-203ENST00000463511 ARID4AP29374 1257 aaPredicted RBP28.57■■■□□ 2.16
SSNA1-203ENST00000463511 U2AF1L4Q8WU68 220 aaKnown RBP28.57■■■□□ 2.16
SSNA1-203ENST00000463511 RAI14Q9P0K7 980 aa28.57■■■□□ 2.16
SSNA1-203ENST00000463511 RANBP2P49792 3224 aaKnown RBP28.57■■■□□ 2.16
SSNA1-203ENST00000463511 PNMA6EA0A0J9YXQ4 647 aa28.56■■■□□ 2.16
SSNA1-203ENST00000463511 GNAI2P04899 355 aa28.56■■■□□ 2.16
SSNA1-203ENST00000463511 LDHCP07864 332 aa28.56■■■□□ 2.16
SSNA1-203ENST00000463511 SZT2Q5T011 3432 aa28.56■■■□□ 2.16
SSNA1-203ENST00000463511 CHRDL2Q6WN34 429 aa28.56■■■□□ 2.16
SSNA1-203ENST00000463511 ANKRD13CQ8N6S4 541 aa28.56■■■□□ 2.16
SSNA1-203ENST00000463511 OSBPL5Q9H0X9 879 aaPredicted RBP28.56■■■□□ 2.16
SSNA1-203ENST00000463511 ALPK3Q96L96 1907 aa28.55■■■□□ 2.16
SSNA1-203ENST00000463511 INHAP05111 366 aa28.55■■■□□ 2.16
SSNA1-203ENST00000463511 MCAMP43121 646 aa28.55■■■□□ 2.16
SSNA1-203ENST00000463511 FARP2O94887 1054 aaPredicted RBP28.54■■■□□ 2.16
SSNA1-203ENST00000463511 FRAT1Q92837 279 aaPredicted RBP28.54■■■□□ 2.16
SSNA1-203ENST00000463511 HTATIP2Q9BUP3 242 aa28.54■■■□□ 2.16
SSNA1-203ENST00000463511 PNMA3Q9UL41 463 aa28.54■■■□□ 2.16
SSNA1-203ENST00000463511 TAOK2Q9UL54 1235 aa28.54■■■□□ 2.16
SSNA1-203ENST00000463511 IPO8O15397 1037 aaKnown RBP28.53■■■□□ 2.16
SSNA1-203ENST00000463511 MAP4K4O95819 1239 aaPredicted RBP28.53■■■□□ 2.16
SSNA1-203ENST00000463511 SPP2Q13103 211 aa28.53■■■□□ 2.16
SSNA1-203ENST00000463511 G3BP1Q13283 466 aaKnown RBP eCLIP28.53■■■□□ 2.16
SSNA1-203ENST00000463511 ATF7IPQ6VMQ6 1270 aa28.53■■■□□ 2.16
SSNA1-203ENST00000463511 TEX11Q8IYF3 940 aa28.53■■■□□ 2.16
SSNA1-203ENST00000463511 PROCA1Q8NCQ7 364 aaPredicted RBP28.53■■■□□ 2.16
SSNA1-203ENST00000463511 CLUAP1Q96AJ1 413 aa28.53■■■□□ 2.16
SSNA1-203ENST00000463511 PLXNB2O15031 1838 aa28.53■■■□□ 2.16
SSNA1-203ENST00000463511 SGPL1O95470 568 aa28.52■■■□□ 2.16
SSNA1-203ENST00000463511 IRF5Q13568 498 aa28.52■■■□□ 2.16
SSNA1-203ENST00000463511 ZNF280CQ8ND82 737 aa28.52■■■□□ 2.16
SSNA1-203ENST00000463511 PXYLP1Q8TE99 480 aa28.52■■■□□ 2.16
SSNA1-203ENST00000463511 LRP2BPQ9P2M1 347 aa28.52■■■□□ 2.16
SSNA1-203ENST00000463511 RCAN3Q9UKA8 241 aa28.52■■■□□ 2.16
SSNA1-203ENST00000463511 HMGCS2P54868 508 aa28.51■■■□□ 2.15
SSNA1-203ENST00000463511 RRP1BQ14684 758 aaKnown RBP28.51■■■□□ 2.15
SSNA1-203ENST00000463511 FAM110CQ1W6H9 321 aa28.51■■■□□ 2.15
SSNA1-203ENST00000463511 SH3RF3Q8TEJ3 882 aaPredicted RBP28.51■■■□□ 2.15
SSNA1-203ENST00000463511 COA7Q96BR5 231 aa28.51■■■□□ 2.15
SSNA1-203ENST00000463511 UQCRFS1P1P0C7P4 283 aa28.5■■■□□ 2.15
SSNA1-203ENST00000463511 CAP2P40123 477 aa28.5■■■□□ 2.15
SSNA1-203ENST00000463511 RBM27Q9P2N5 1060 aaKnown RBP28.5■■■□□ 2.15
SSNA1-203ENST00000463511 DEFB118Q96PH6 123 aa28.49■■■□□ 2.15
SSNA1-203ENST00000463511 NOL10Q9BSC4 688 aaKnown RBP28.49■■■□□ 2.15
SSNA1-203ENST00000463511 SNRKQ9NRH2 765 aa28.49■■■□□ 2.15
SSNA1-203ENST00000463511 MYH1P12882 1939 aa28.49■■■□□ 2.15
SSNA1-203ENST00000463511 TBC1D2Q9BYX2 928 aa28.48■■■□□ 2.15
SSNA1-203ENST00000463511 HERC5Q9UII4 1024 aaKnown RBP28.48■■■□□ 2.15
SSNA1-203ENST00000463511 AATFQ9NY61 560 aaKnown RBP eCLIP28.47■■■□□ 2.15
SSNA1-203ENST00000463511 USP17L5A8MUK1 530 aa28.46■■■□□ 2.15
SSNA1-203ENST00000463511 TFRCP02786 760 aaKnown RBP28.46■■■□□ 2.15
SSNA1-203ENST00000463511 GCLCP48506 637 aaPredicted RBP28.46■■■□□ 2.15
SSNA1-203ENST00000463511 PABPC4Q13310 644 aaKnown RBP eCLIP28.46■■■□□ 2.152e-8■■□□□ 14.5
SSNA1-203ENST00000463511 TTC39AQ5SRH9 613 aa28.46■■■□□ 2.15
SSNA1-203ENST00000463511 NAA16Q6N069 864 aaPredicted RBP28.46■■■□□ 2.15
SSNA1-203ENST00000463511 ASCC2Q9H1I8 757 aaPredicted RBP28.46■■■□□ 2.15
SSNA1-203ENST00000463511 PAK6Q9NQU5 681 aaPredicted RBP28.46■■■□□ 2.15
SSNA1-203ENST00000463511 NR2E3Q9Y5X4 410 aa28.46■■■□□ 2.15
SSNA1-203ENST00000463511 TMEM57Q8N5G2 664 aa28.45■■■□□ 2.14
SSNA1-203ENST00000463511 PI4KBQ9UBF8 816 aa28.45■■■□□ 2.14
SSNA1-203ENST00000463511 TNNI3KQ59H18 835 aa28.44■■■□□ 2.14
SSNA1-203ENST00000463511 ZKSCAN2Q63HK3 967 aa28.44■■■□□ 2.14
SSNA1-203ENST00000463511 DBNDD2Q9BQY9 259 aa28.44■■■□□ 2.14
SSNA1-203ENST00000463511 AS3MTQ9HBK9 375 aa28.44■■■□□ 2.14
SSNA1-203ENST00000463511 FPGT-TNNI3KV9GXZ4 949 aa28.44■■■□□ 2.14
SSNA1-203ENST00000463511 ZBTB7BO15156 539 aaPredicted RBP28.43■■■□□ 2.14
SSNA1-203ENST00000463511 BAG3O95817 575 aa28.43■■■□□ 2.14
SSNA1-203ENST00000463511 OS9Q13438 667 aaPredicted RBP28.43■■■□□ 2.14
SSNA1-203ENST00000463511 MTMR2Q13614 643 aa28.43■■■□□ 2.14
SSNA1-203ENST00000463511 SH3D19Q5HYK7 790 aa28.43■■■□□ 2.14
SSNA1-203ENST00000463511 ADGRA1Q86SQ6 560 aa28.43■■■□□ 2.14
SSNA1-203ENST00000463511 MAPKAPK5Q8IW41 473 aa28.43■■■□□ 2.14
SSNA1-203ENST00000463511 DHX36Q9H2U1 1008 aaKnown RBP28.43■■■□□ 2.14
SSNA1-203ENST00000463511 DDX60LQ5H9U9 1706 aaKnown RBP28.43■■■□□ 2.14
SSNA1-203ENST00000463511 FLT1P17948 1338 aa28.43■■■□□ 2.14
SSNA1-203ENST00000463511 PLCG2P16885 1265 aa28.42■■■□□ 2.14
SSNA1-203ENST00000463511 POLA2Q14181 598 aa28.42■■■□□ 2.14
SSNA1-203ENST00000463511 TGFBRAP1Q8WUH2 860 aa28.42■■■□□ 2.14
SSNA1-203ENST00000463511 XRN2Q9H0D6 950 aaKnown RBP eCLIP28.42■■■□□ 2.14
SSNA1-203ENST00000463511 GPR108Q9NPR9 543 aa28.42■■■□□ 2.14
SSNA1-203ENST00000463511 CYP2E1P05181 493 aaPredicted RBP28.41■■■□□ 2.14
SSNA1-203ENST00000463511 CCDC158Q5M9N0 1113 aa28.41■■■□□ 2.14
SSNA1-203ENST00000463511 CRISPLD2Q9H0B8 497 aa28.41■■■□□ 2.14
SSNA1-203ENST00000463511 PRO3102Q9H379 93 aa28.41■■■□□ 2.14
SSNA1-203ENST00000463511 DNAJC18Q9H819 358 aa28.41■■■□□ 2.14
SSNA1-203ENST00000463511 EVI5O60447 810 aa28.4■■■□□ 2.14
SSNA1-203ENST00000463511 HMGCRP04035 888 aa28.4■■■□□ 2.14
SSNA1-203ENST00000463511 ASNSP08243 561 aa28.4■■■□□ 2.14
SSNA1-203ENST00000463511 PPP4CP60510 307 aa28.4■■■□□ 2.14
SSNA1-203ENST00000463511 JAG1P78504 1218 aa28.4■■■□□ 2.14
SSNA1-203ENST00000463511 SHROOM1Q2M3G4 852 aaPredicted RBP28.4■■■□□ 2.14
SSNA1-203ENST00000463511 WDR18Q9BV38 432 aa28.4■■■□□ 2.14
SSNA1-203ENST00000463511 CAPN2P17655 700 aa28.39■■■□□ 2.14
SSNA1-203ENST00000463511 IRX3P78415 501 aaPredicted RBP28.39■■■□□ 2.14
SSNA1-203ENST00000463511 CRACR2BQ8N4Y2 399 aaPredicted RBP28.39■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms