RNA–Protein interactions for RNA: ENST00000461967.1

RPL3-209, Transcript of ribosomal protein L3, humanhuman

TSL 2

Gene RPL3, Length 767 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3-209ENST00000461967 TBC1D2Q9BYX2 928 aa16.08■□□□□ 0.16
RPL3-209ENST00000461967 TNNQ9UQP3 1299 aa16.08■□□□□ 0.16
RPL3-209ENST00000461967 FOCADQ5VW36 1801 aa16.08■□□□□ 0.16
RPL3-209ENST00000461967 ADCY3O60266 1144 aa16.07■□□□□ 0.16
RPL3-209ENST00000461967 BAG3O95817 575 aa16.07■□□□□ 0.16
RPL3-209ENST00000461967 SLURP2P0DP57 97 aa16.07■□□□□ 0.16
RPL3-209ENST00000461967 PLCG2P16885 1265 aa16.07■□□□□ 0.16
RPL3-209ENST00000461967 GJA8P48165 433 aa16.07■□□□□ 0.16
RPL3-209ENST00000461967 CCDC158Q5M9N0 1113 aa16.07■□□□□ 0.16
RPL3-209ENST00000461967 NAA16Q6N069 864 aaPredicted RBP16.07■□□□□ 0.16
RPL3-209ENST00000461967 PROCA1Q8NCQ7 364 aaPredicted RBP16.07■□□□□ 0.16
RPL3-209ENST00000461967 ZNF384Q8TF68 577 aa16.07■□□□□ 0.16
RPL3-209ENST00000461967 DPF3Q92784 378 aa16.07■□□□□ 0.16
RPL3-209ENST00000461967 COA7Q96BR5 231 aa16.07■□□□□ 0.16
RPL3-209ENST00000461967 SHISA4Q96DD7 197 aa16.07■□□□□ 0.16
RPL3-209ENST00000461967 HTATIP2Q9BUP3 242 aa16.07■□□□□ 0.16
RPL3-209ENST00000461967 AS3MTQ9HBK9 375 aa16.07■□□□□ 0.16
RPL3-209ENST00000461967 GABRQQ9UN88 632 aa16.07■□□□□ 0.16
RPL3-209ENST00000461967 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.07■□□□□ 0.16
RPL3-209ENST00000461967 GJB1P08034 283 aa16.06■□□□□ 0.16
RPL3-209ENST00000461967 FLT3LGP49771 235 aa16.06■□□□□ 0.16
RPL3-209ENST00000461967 TMEM57Q8N5G2 664 aa16.06■□□□□ 0.16
RPL3-209ENST00000461967 ANKRD13CQ8N6S4 541 aa16.06■□□□□ 0.16
RPL3-209ENST00000461967 ZNF280CQ8ND82 737 aa16.06■□□□□ 0.16
RPL3-209ENST00000461967 SH3RF3Q8TEJ3 882 aaPredicted RBP16.06■□□□□ 0.16
RPL3-209ENST00000461967 HERC5Q9UII4 1024 aaKnown RBP16.06■□□□□ 0.16
RPL3-209ENST00000461967 CDK5RAP2Q96SN8 1893 aa16.05■□□□□ 0.16
RPL3-209ENST00000461967 H0YGN5 161 aa16.05■□□□□ 0.16
RPL3-209ENST00000461967 INHAP05111 366 aa16.05■□□□□ 0.16
RPL3-209ENST00000461967 ELNP15502 786 aa16.05■□□□□ 0.16
RPL3-209ENST00000461967 HMGCS2P54868 508 aa16.05■□□□□ 0.16
RPL3-209ENST00000461967 SPP2Q13103 211 aa16.05■□□□□ 0.16
RPL3-209ENST00000461967 FAM110CQ1W6H9 321 aa16.05■□□□□ 0.16
RPL3-209ENST00000461967 TNNI3KQ59H18 835 aa16.05■□□□□ 0.16
RPL3-209ENST00000461967 TREML2Q5T2D2 321 aa16.05■□□□□ 0.16
RPL3-209ENST00000461967 CRACR2BQ8N4Y2 399 aaPredicted RBP16.05■□□□□ 0.16
RPL3-209ENST00000461967 DHX36Q9H2U1 1008 aaKnown RBP16.05■□□□□ 0.16
RPL3-209ENST00000461967 SNRKQ9NRH2 765 aa16.05■□□□□ 0.16
RPL3-209ENST00000461967 AATFQ9NY61 560 aaKnown RBP eCLIP16.05■□□□□ 0.161e-323■■■■■ 54.3
RPL3-209ENST00000461967 COLQQ9Y215 455 aaPredicted RBP16.05■□□□□ 0.16
RPL3-209ENST00000461967 FPGT-TNNI3KV9GXZ4 949 aa16.05■□□□□ 0.16
RPL3-209ENST00000461967 SIPA1L1O43166 1804 aa16.05■□□□□ 0.16
RPL3-209ENST00000461967 USP17L5A8MUK1 530 aa16.04■□□□□ 0.16
RPL3-209ENST00000461967 FARP2O94887 1054 aaPredicted RBP16.04■□□□□ 0.16
RPL3-209ENST00000461967 CAP2P40123 477 aa16.04■□□□□ 0.16
RPL3-209ENST00000461967 ITPRIPQ8IWB1 547 aa16.04■□□□□ 0.16
RPL3-209ENST00000461967 U2AF1L4Q8WU68 220 aaKnown RBP16.04■□□□□ 0.16
RPL3-209ENST00000461967 UNC93B1Q9H1C4 597 aa16.04■□□□□ 0.16
RPL3-209ENST00000461967 GPR108Q9NPR9 543 aa16.04■□□□□ 0.16
RPL3-209ENST00000461967 PI4KBQ9UBF8 816 aa16.04■□□□□ 0.16
RPL3-209ENST00000461967 SURF6O75683 361 aaKnown RBP16.03■□□□□ 0.16
RPL3-209ENST00000461967 GCLCP48506 637 aaPredicted RBP16.03■□□□□ 0.16
RPL3-209ENST00000461967 IRF5Q13568 498 aa16.03■□□□□ 0.16
RPL3-209ENST00000461967 PXYLP1Q8TE99 480 aa16.03■□□□□ 0.16
RPL3-209ENST00000461967 DBNDD2Q9BQY9 259 aa16.03■□□□□ 0.16
RPL3-209ENST00000461967 C1orf115Q9H7X2 142 aa16.03■□□□□ 0.16
RPL3-209ENST00000461967 TMOD4Q9NZQ9 345 aa16.03■□□□□ 0.16
RPL3-209ENST00000461967 FLT1P17948 1338 aa16.02■□□□□ 0.16
RPL3-209ENST00000461967 HLA-DOAP06340 250 aa16.02■□□□□ 0.16
RPL3-209ENST00000461967 IRX3P78415 501 aaPredicted RBP16.02■□□□□ 0.16
RPL3-209ENST00000461967 HNRNPUQ00839 825 aaKnown RBP eCLIP16.02■□□□□ 0.16
RPL3-209ENST00000461967 POLA2Q14181 598 aa16.02■□□□□ 0.16
RPL3-209ENST00000461967 CHRDL2Q6WN34 429 aa16.02■□□□□ 0.16
RPL3-209ENST00000461967 MAPKAPK5Q8IW41 473 aa16.02■□□□□ 0.16
RPL3-209ENST00000461967 SSH3Q8TE77 659 aa16.02■□□□□ 0.16
RPL3-209ENST00000461967 TGFBRAP1Q8WUH2 860 aa16.02■□□□□ 0.16
RPL3-209ENST00000461967 NR2E3Q9Y5X4 410 aa16.02■□□□□ 0.16
RPL3-209ENST00000461967 TFRCP02786 760 aaKnown RBP16.01■□□□□ 0.15
RPL3-209ENST00000461967 ASNSP08243 561 aa16.01■□□□□ 0.15
RPL3-209ENST00000461967 FXR1P51114 621 aaKnown RBP eCLIP16.01■□□□□ 0.15
RPL3-209ENST00000461967 MTMR2Q13614 643 aa16.01■□□□□ 0.15
RPL3-209ENST00000461967 MYO5AQ9Y4I1 1855 aaKnown RBP16.01■□□□□ 0.15
RPL3-209ENST00000461967 IGSF3O75054 1194 aa16■□□□□ 0.15
RPL3-209ENST00000461967 SGPL1O95470 568 aa16■□□□□ 0.15
RPL3-209ENST00000461967 CYP2E1P05181 493 aaPredicted RBP16■□□□□ 0.15
RPL3-209ENST00000461967 ATP8B2P98198 1209 aa16■□□□□ 0.15
RPL3-209ENST00000461967 DEFB118Q96PH6 123 aa16■□□□□ 0.15
RPL3-209ENST00000461967 ASCC2Q9H1I8 757 aaPredicted RBP16■□□□□ 0.15
RPL3-209ENST00000461967 IDH1O75874 414 aaKnown RBP15.99■□□□□ 0.15
RPL3-209ENST00000461967 GDF11O95390 407 aa15.99■□□□□ 0.15
RPL3-209ENST00000461967 HMGCRP04035 888 aa15.99■□□□□ 0.15
RPL3-209ENST00000461967 CAPN2P17655 700 aa15.99■□□□□ 0.15
RPL3-209ENST00000461967 ZAP70P43403 619 aa15.99■□□□□ 0.15
RPL3-209ENST00000461967 SH3D19Q5HYK7 790 aa15.99■□□□□ 0.15
RPL3-209ENST00000461967 CERS3Q8IU89 383 aa15.99■□□□□ 0.15
RPL3-209ENST00000461967 ZNF512BQ96KM6 892 aaPredicted RBP15.99■□□□□ 0.15
RPL3-209ENST00000461967 SAP30BPQ9UHR5 308 aaKnown RBP15.99■□□□□ 0.15
RPL3-209ENST00000461967 MYH1P12882 1939 aa15.99■□□□□ 0.15
RPL3-209ENST00000461967 CYP7A1P22680 504 aa15.98■□□□□ 0.15
RPL3-209ENST00000461967 PPP4CP60510 307 aa15.98■□□□□ 0.15
RPL3-209ENST00000461967 RRP1BQ14684 758 aaKnown RBP15.98■□□□□ 0.15
RPL3-209ENST00000461967 UBE2Q1Q7Z7E8 422 aa15.98■□□□□ 0.15
RPL3-209ENST00000461967 ADGRA1Q86SQ6 560 aa15.98■□□□□ 0.15
RPL3-209ENST00000461967 CCAR1Q8IX12 1150 aaKnown RBP15.98■□□□□ 0.15
RPL3-209ENST00000461967 WDR18Q9BV38 432 aa15.98■□□□□ 0.15
RPL3-209ENST00000461967 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.98■□□□□ 0.154e-8■■■□□ 17.3
RPL3-209ENST00000461967 PIH1D3Q9NQM4 214 aaKnown RBP15.98■□□□□ 0.15
RPL3-209ENST00000461967 GINM1Q9NU53 330 aa15.98■□□□□ 0.15
RPL3-209ENST00000461967 DBNLQ9UJU6 430 aaKnown RBP15.98■□□□□ 0.15
RPL3-209ENST00000461967 PALD1Q9ULE6 856 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms