RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 SLC27A2O14975 620 aa18.05■□□□□ 0.48
TMEM39A-203ENST00000461654 TRPA1O75762 1119 aa18.05■□□□□ 0.48
TMEM39A-203ENST00000461654 IMMTQ16891 758 aaKnown RBP18.05■□□□□ 0.48
TMEM39A-203ENST00000461654 FAM83AQ86UY5 434 aa18.05■□□□□ 0.48
TMEM39A-203ENST00000461654 LCORLQ8N3X6 602 aa18.05■□□□□ 0.48
TMEM39A-203ENST00000461654 SLC10A4Q96EP9 437 aa18.05■□□□□ 0.48
TMEM39A-203ENST00000461654 CRNKL1Q9BZJ0 848 aaKnown RBP18.05■□□□□ 0.48
TMEM39A-203ENST00000461654 SNX14Q9Y5W7 946 aa18.05■□□□□ 0.48
TMEM39A-203ENST00000461654 SLC4A4Q9Y6R1 1079 aa18.05■□□□□ 0.48
TMEM39A-203ENST00000461654 ST18O60284 1047 aa18.04■□□□□ 0.48
TMEM39A-203ENST00000461654 ZBTB48P10074 688 aaPredicted RBP18.04■□□□□ 0.48
TMEM39A-203ENST00000461654 PSMA5P28066 241 aa18.04■□□□□ 0.48
TMEM39A-203ENST00000461654 IREB2P48200 963 aaKnown RBP18.04■□□□□ 0.48
TMEM39A-203ENST00000461654 INHBEP58166 350 aa18.04■□□□□ 0.48
TMEM39A-203ENST00000461654 ADGRA1Q86SQ6 560 aa18.04■□□□□ 0.48
TMEM39A-203ENST00000461654 KCNB2Q92953 911 aa18.04■□□□□ 0.48
TMEM39A-203ENST00000461654 KIF2CQ99661 725 aa18.04■□□□□ 0.48
TMEM39A-203ENST00000461654 PALD1Q9ULE6 856 aa18.04■□□□□ 0.48
TMEM39A-203ENST00000461654 FZD1Q9UP38 647 aa18.04■□□□□ 0.48
TMEM39A-203ENST00000461654 MROH7-TTC4A0A0A0MT08 1334 aa18.03■□□□□ 0.48
TMEM39A-203ENST00000461654 TCP10L2B9ZVM9 353 aa18.03■□□□□ 0.48
TMEM39A-203ENST00000461654 PLCG2P16885 1265 aa18.03■□□□□ 0.48
TMEM39A-203ENST00000461654 SREBF2Q12772 1141 aa18.03■□□□□ 0.48
TMEM39A-203ENST00000461654 ALX1Q15699 326 aa18.03■□□□□ 0.48
TMEM39A-203ENST00000461654 ANKRD13AQ8IZ07 590 aa18.03■□□□□ 0.48
TMEM39A-203ENST00000461654 ZNF384Q8TF68 577 aa18.03■□□□□ 0.48
TMEM39A-203ENST00000461654 IL17RAQ96F46 866 aa18.03■□□□□ 0.48
TMEM39A-203ENST00000461654 IPO9Q96P70 1041 aaKnown RBP18.03■□□□□ 0.48
TMEM39A-203ENST00000461654 RIOK1Q9BRS2 568 aaKnown RBP18.03■□□□□ 0.48
TMEM39A-203ENST00000461654 NAPBQ9H115 298 aa18.03■□□□□ 0.48
TMEM39A-203ENST00000461654 AATFQ9NY61 560 aaKnown RBP eCLIP18.03■□□□□ 0.48
TMEM39A-203ENST00000461654 ZNF213O14771 459 aa18.02■□□□□ 0.48
TMEM39A-203ENST00000461654 FGAP02671 866 aa18.02■□□□□ 0.48
TMEM39A-203ENST00000461654 TDO2P48775 406 aa18.02■□□□□ 0.48
TMEM39A-203ENST00000461654 DIXDC1Q155Q3 683 aa18.02■□□□□ 0.48
TMEM39A-203ENST00000461654 NOM1Q5C9Z4 860 aaKnown RBP18.02■□□□□ 0.48
TMEM39A-203ENST00000461654 FAM163AQ96GL9 167 aaPredicted RBP18.02■□□□□ 0.48
TMEM39A-203ENST00000461654 CFHR5Q9BXR6 569 aa18.02■□□□□ 0.48
TMEM39A-203ENST00000461654 TMEM39BQ9GZU3 492 aa18.02■□□□□ 0.48
TMEM39A-203ENST00000461654 TMOD2Q9NZR1 351 aa18.02■□□□□ 0.48
TMEM39A-203ENST00000461654 MYO5AQ9Y4I1 1855 aaKnown RBP18.02■□□□□ 0.48
TMEM39A-203ENST00000461654 ZMYM6O95789 1325 aa18.01■□□□□ 0.47
TMEM39A-203ENST00000461654 MANSC4A6NHS7 340 aaPredicted RBP18.01■□□□□ 0.47
TMEM39A-203ENST00000461654 CAPN15O75808 1086 aa18.01■□□□□ 0.47
TMEM39A-203ENST00000461654 PPP4CP60510 307 aa18.01■□□□□ 0.47
TMEM39A-203ENST00000461654 DYNLL1P63167 89 aaKnown RBP18.01■□□□□ 0.47
TMEM39A-203ENST00000461654 TSGA10IPQ3SY00 556 aa18.01■□□□□ 0.47
TMEM39A-203ENST00000461654 HSCBQ8IWL3 235 aa18.01■□□□□ 0.47
TMEM39A-203ENST00000461654 RASEFQ8IZ41 740 aa18.01■□□□□ 0.47
TMEM39A-203ENST00000461654 IFNL3Q8IZI9 196 aa18.01■□□□□ 0.47
TMEM39A-203ENST00000461654 ABHD8Q96I13 439 aa18.01■□□□□ 0.47
TMEM39A-203ENST00000461654 CLMNQ96JQ2 1002 aa18.01■□□□□ 0.47
TMEM39A-203ENST00000461654 JAKMIP1Q96N16 626 aaKnown RBP18.01■□□□□ 0.47
TMEM39A-203ENST00000461654 TM6SF1Q9BZW5 370 aa18.01■□□□□ 0.47
TMEM39A-203ENST00000461654 GSG1L2A8MUP6 293 aa18■□□□□ 0.47
TMEM39A-203ENST00000461654 CYP21A2P08686 494 aa18■□□□□ 0.47
TMEM39A-203ENST00000461654 BTDP43251 543 aa18■□□□□ 0.47
TMEM39A-203ENST00000461654 NEK4P51957 841 aa18■□□□□ 0.47
TMEM39A-203ENST00000461654 GIMAP6Q6P9H5 292 aa18■□□□□ 0.47
TMEM39A-203ENST00000461654 CDAN1Q8IWY9 1227 aa18■□□□□ 0.47
TMEM39A-203ENST00000461654 HOOK2Q96ED9 719 aa18■□□□□ 0.47
TMEM39A-203ENST00000461654 WNK4Q96J92 1243 aa18■□□□□ 0.47
TMEM39A-203ENST00000461654 ATP8A2Q9NTI2 1148 aa18■□□□□ 0.47
TMEM39A-203ENST00000461654 DAGLAQ9Y4D2 1042 aa18■□□□□ 0.47
TMEM39A-203ENST00000461654 GAKO14976 1311 aa17.99■□□□□ 0.47
TMEM39A-203ENST00000461654 GPR75-ASB3A0A0A6YYF3 556 aa17.99■□□□□ 0.47
TMEM39A-203ENST00000461654 FOXP2O15409 715 aa17.99■□□□□ 0.47
TMEM39A-203ENST00000461654 PRKAB2O43741 272 aa17.99■□□□□ 0.47
TMEM39A-203ENST00000461654 ALDH1A1P00352 501 aa17.99■□□□□ 0.47
TMEM39A-203ENST00000461654 HMGB1P09429 215 aaKnown RBP17.99■□□□□ 0.47
TMEM39A-203ENST00000461654 USP5P45974 858 aa17.99■□□□□ 0.47
TMEM39A-203ENST00000461654 CACNB3P54284 484 aa17.99■□□□□ 0.47
TMEM39A-203ENST00000461654 MAP3K9P80192 1104 aa17.99■□□□□ 0.47
TMEM39A-203ENST00000461654 MKRN3Q13064 507 aaKnown RBP17.99■□□□□ 0.47
TMEM39A-203ENST00000461654 AMOTL1Q8IY63 956 aa17.99■□□□□ 0.47
TMEM39A-203ENST00000461654 SNX21Q969T3 373 aa17.99■□□□□ 0.47
TMEM39A-203ENST00000461654 CYP46A1Q9Y6A2 500 aa17.99■□□□□ 0.47
TMEM39A-203ENST00000461654 CASTP20810 708 aaKnown RBP17.98■□□□□ 0.47
TMEM39A-203ENST00000461654 CDC42EP5Q6NZY7 148 aa17.98■□□□□ 0.47
TMEM39A-203ENST00000461654 BLOC1S2Q6QNY1 142 aa17.98■□□□□ 0.47
TMEM39A-203ENST00000461654 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.98■□□□□ 0.47
TMEM39A-203ENST00000461654 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.98■□□□□ 0.47
TMEM39A-203ENST00000461654 FAM151AQ8WW52 585 aa17.98■□□□□ 0.47
TMEM39A-203ENST00000461654 NEK1Q96PY6 1258 aa17.98■□□□□ 0.47
TMEM39A-203ENST00000461654 MCOLN1Q9GZU1 580 aa17.98■□□□□ 0.47
TMEM39A-203ENST00000461654 TESPA1A2RU30 521 aaPredicted RBP17.97■□□□□ 0.47
TMEM39A-203ENST00000461654 MCM2P49736 904 aa17.97■□□□□ 0.47
TMEM39A-203ENST00000461654 TRDNQ13061 729 aa17.97■□□□□ 0.47
TMEM39A-203ENST00000461654 IFNL1Q8IU54 200 aa17.97■□□□□ 0.47
TMEM39A-203ENST00000461654 SDR42E1Q8WUS8 393 aa17.97■□□□□ 0.47
TMEM39A-203ENST00000461654 ZSWIM6Q9HCJ5 1215 aa17.97■□□□□ 0.47
TMEM39A-203ENST00000461654 CASP8AP2Q9UKL3 1982 aa17.97■□□□□ 0.47
TMEM39A-203ENST00000461654 TBC1D8O95759 1140 aa17.96■□□□□ 0.47
TMEM39A-203ENST00000461654 HAND2P61296 217 aa17.96■□□□□ 0.47
TMEM39A-203ENST00000461654 DGKZQ13574 1117 aa17.96■□□□□ 0.47
TMEM39A-203ENST00000461654 RUFY3Q7L099 469 aa17.96■□□□□ 0.47
TMEM39A-203ENST00000461654 RALYLQ86SE5 291 aaKnown RBP17.96■□□□□ 0.47
TMEM39A-203ENST00000461654 TEX11Q8IYF3 940 aa17.96■□□□□ 0.47
TMEM39A-203ENST00000461654 SH3RF3Q8TEJ3 882 aaPredicted RBP17.96■□□□□ 0.47
TMEM39A-203ENST00000461654 UPF3BQ9BZI7 483 aaKnown RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms