RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 ZSCAN22P10073 491 aaPredicted RBP6.2□□□□□ -1.42
CLK1-206ENST00000461326 TCF3P15923 654 aa6.2□□□□□ -1.42
CLK1-206ENST00000461326 LIG1P18858 919 aa6.2□□□□□ -1.42
CLK1-206ENST00000461326 ITIH2P19823 946 aa6.2□□□□□ -1.42
CLK1-206ENST00000461326 MRPL58Q14197 206 aaKnown RBP6.2□□□□□ -1.42
CLK1-206ENST00000461326 DUSP23Q9BVJ7 150 aa6.2□□□□□ -1.42
CLK1-206ENST00000461326 PCOLCE2Q9UKZ9 415 aa6.2□□□□□ -1.42
CLK1-206ENST00000461326 PLAGL2Q9UPG8 496 aa6.2□□□□□ -1.42
CLK1-206ENST00000461326 EIF1AYO14602 144 aaKnown RBP6.19□□□□□ -1.42
CLK1-206ENST00000461326 SORBS3O60504 671 aa6.19□□□□□ -1.42
CLK1-206ENST00000461326 LEFTY1O75610 366 aa6.19□□□□□ -1.42
CLK1-206ENST00000461326 ITPKAP23677 461 aa6.19□□□□□ -1.42
CLK1-206ENST00000461326 GNA15P30679 374 aa6.19□□□□□ -1.42
CLK1-206ENST00000461326 AFMP43652 599 aa6.19□□□□□ -1.42
CLK1-206ENST00000461326 DAB2P98082 770 aa6.19□□□□□ -1.42
CLK1-206ENST00000461326 IKZF1Q13422 519 aa6.19□□□□□ -1.42
CLK1-206ENST00000461326 KIAA0319Q5VV43 1072 aa6.19□□□□□ -1.42
CLK1-206ENST00000461326 LCNL1Q6ZST4 164 aa6.19□□□□□ -1.42
CLK1-206ENST00000461326 SYDE1Q6ZW31 735 aaPredicted RBP6.19□□□□□ -1.42
CLK1-206ENST00000461326 C1QL4Q86Z23 238 aa6.19□□□□□ -1.42
CLK1-206ENST00000461326 TNKS2Q9H2K2 1166 aa6.19□□□□□ -1.42
CLK1-206ENST00000461326 RAPGEFL1Q9UHV5 662 aa6.19□□□□□ -1.42
CLK1-206ENST00000461326 SPG7Q9UQ90 795 aa6.19□□□□□ -1.42
CLK1-206ENST00000461326 GIPC1O14908 333 aa6.18□□□□□ -1.42
CLK1-206ENST00000461326 RECKO95980 971 aa6.18□□□□□ -1.42
CLK1-206ENST00000461326 PTPN12Q05209 780 aaKnown RBP6.18□□□□□ -1.42
CLK1-206ENST00000461326 ZP2Q05996 745 aa6.18□□□□□ -1.42
CLK1-206ENST00000461326 PSMD2Q13200 908 aa6.18□□□□□ -1.42
CLK1-206ENST00000461326 TTLL4Q14679 1199 aa6.18□□□□□ -1.42
CLK1-206ENST00000461326 MPZL3Q6UWV2 235 aa6.18□□□□□ -1.42
CLK1-206ENST00000461326 LIN37Q96GY3 246 aaPredicted RBP6.18□□□□□ -1.42
CLK1-206ENST00000461326 DUSP9Q99956 384 aaKnown RBP6.18□□□□□ -1.42
CLK1-206ENST00000461326 EHD4Q9H223 541 aa6.18□□□□□ -1.42
CLK1-206ENST00000461326 CCDC86Q9H6F5 360 aaKnown RBP6.18□□□□□ -1.42
CLK1-206ENST00000461326 PRDM7Q9NQW5 492 aa6.18□□□□□ -1.42
CLK1-206ENST00000461326 LMCD1Q9NZU5 365 aa6.18□□□□□ -1.42
CLK1-206ENST00000461326 PARP2Q9UGN5 583 aa6.18□□□□□ -1.42
CLK1-206ENST00000461326 NFIBO00712 420 aa6.17□□□□□ -1.42
CLK1-206ENST00000461326 GLI1P08151 1106 aa6.17□□□□□ -1.42
CLK1-206ENST00000461326 TAGLNQ01995 201 aaKnown RBP6.17□□□□□ -1.42
CLK1-206ENST00000461326 ORC1Q13415 861 aa6.17□□□□□ -1.42
CLK1-206ENST00000461326 KIF4BQ2VIQ3 1234 aa6.17□□□□□ -1.42
CLK1-206ENST00000461326 TOP6BLQ8N6T0 577 aa6.17□□□□□ -1.42
CLK1-206ENST00000461326 WDR89Q96FK6 387 aaPredicted RBP6.17□□□□□ -1.42
CLK1-206ENST00000461326 SRCIN1Q9C0H9 1055 aa6.17□□□□□ -1.42
CLK1-206ENST00000461326 SSU72Q9NP77 194 aaKnown RBP6.17□□□□□ -1.42
CLK1-206ENST00000461326 DISC1Q9NRI5 854 aa6.17□□□□□ -1.42
CLK1-206ENST00000461326 GTF2IRD1Q9UHL9 959 aa6.17□□□□□ -1.42
CLK1-206ENST00000461326 CTNND2Q9UQB3 1225 aa6.17□□□□□ -1.42
CLK1-206ENST00000461326 SCAMP3O14828 347 aaKnown RBP6.16□□□□□ -1.42
CLK1-206ENST00000461326 HCLS1P14317 486 aaPredicted RBP6.16□□□□□ -1.42
CLK1-206ENST00000461326 TSNAXIP1Q2TAA8 658 aa6.16□□□□□ -1.42
CLK1-206ENST00000461326 RPS26P11Q5JNZ5 115 aaPredicted RBP6.16□□□□□ -1.42
CLK1-206ENST00000461326 CRELD1Q96HD1 420 aa6.16□□□□□ -1.42
CLK1-206ENST00000461326 ZC3H12CQ9C0D7 883 aaKnown RBP6.16□□□□□ -1.42
CLK1-206ENST00000461326 KRT82Q9NSB4 513 aa6.16□□□□□ -1.42
CLK1-206ENST00000461326 VTI1BQ9UEU0 232 aa6.16□□□□□ -1.42
CLK1-206ENST00000461326 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.15□□□□□ -1.42
CLK1-206ENST00000461326 ZNF862O60290 1169 aa6.15□□□□□ -1.42
CLK1-206ENST00000461326 TTLL10Q6ZVT0 673 aa6.15□□□□□ -1.42
CLK1-206ENST00000461326 METTL5Q9NRN9 209 aaKnown RBP6.15□□□□□ -1.42
CLK1-206ENST00000461326 NLRP2Q9NX02 1062 aa6.15□□□□□ -1.42
CLK1-206ENST00000461326 GSTP1P09211 210 aaKnown RBP6.14□□□□□ -1.43
CLK1-206ENST00000461326 PRR23BQ6ZRT6 265 aa6.14□□□□□ -1.43
CLK1-206ENST00000461326 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.14□□□□□ -1.43
CLK1-206ENST00000461326 FBXO15Q8NCQ5 510 aaPredicted RBP6.14□□□□□ -1.43
CLK1-206ENST00000461326 CCDC74AQ96AQ1 378 aa6.14□□□□□ -1.43
CLK1-206ENST00000461326 KIRREL1Q96J84 757 aa6.14□□□□□ -1.43
CLK1-206ENST00000461326 WWC3Q9ULE0 1092 aa6.14□□□□□ -1.43
CLK1-206ENST00000461326 PCDHGC5Q9Y5F6 944 aa6.14□□□□□ -1.43
CLK1-206ENST00000461326 AK5Q9Y6K8 562 aa6.14□□□□□ -1.43
CLK1-206ENST00000461326 IGF2BP3O00425 579 aaKnown RBP eCLIP6.13□□□□□ -1.43
CLK1-206ENST00000461326 C1QTNF9P0C862 333 aa6.13□□□□□ -1.43
CLK1-206ENST00000461326 EIF4BP23588 611 aaKnown RBP6.13□□□□□ -1.43
CLK1-206ENST00000461326 TMEM67Q5HYA8 995 aa6.13□□□□□ -1.43
CLK1-206ENST00000461326 CYFIP1Q7L576 1253 aa6.13□□□□□ -1.43
CLK1-206ENST00000461326 BACH2Q9BYV9 841 aa6.13□□□□□ -1.43
CLK1-206ENST00000461326 BUD31P41223 144 aaPredicted RBP6.12□□□□□ -1.43
CLK1-206ENST00000461326 CLCN7P51798 805 aa6.12□□□□□ -1.43
CLK1-206ENST00000461326 FYB2Q5VWT5 728 aa6.12□□□□□ -1.43
CLK1-206ENST00000461326 USPL1Q5W0Q7 1092 aa6.12□□□□□ -1.43
CLK1-206ENST00000461326 PRPF40BQ6NWY9 871 aaKnown RBP6.12□□□□□ -1.43
CLK1-206ENST00000461326 SPACA3Q8IXA5 215 aa6.12□□□□□ -1.43
CLK1-206ENST00000461326 ISL2Q96A47 359 aa6.12□□□□□ -1.43
CLK1-206ENST00000461326 HEXIM2Q96MH2 286 aaKnown RBP6.12□□□□□ -1.43
CLK1-206ENST00000461326 C8orf37Q96NL8 207 aa6.12□□□□□ -1.43
CLK1-206ENST00000461326 C12orf49Q9H741 205 aa6.12□□□□□ -1.43
CLK1-206ENST00000461326 NPHS2Q9NP85 383 aa6.12□□□□□ -1.43
CLK1-206ENST00000461326 FAM8A1Q9UBU6 413 aa6.12□□□□□ -1.43
CLK1-206ENST00000461326 TRAK1Q9UPV9 953 aa6.12□□□□□ -1.43
CLK1-206ENST00000461326 GNAT3A8MTJ3 354 aa6.11□□□□□ -1.43
CLK1-206ENST00000461326 NEFMP07197 916 aa6.11□□□□□ -1.43
CLK1-206ENST00000461326 ZNF157P51786 506 aaPredicted RBP6.11□□□□□ -1.43
CLK1-206ENST00000461326 PPP2R3AQ06190 1150 aa6.11□□□□□ -1.43
CLK1-206ENST00000461326 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.11□□□□□ -1.43
CLK1-206ENST00000461326 AMIGO3Q86WK7 504 aa6.11□□□□□ -1.43
CLK1-206ENST00000461326 TMEM87AQ8NBN3 555 aa6.11□□□□□ -1.43
CLK1-206ENST00000461326 SETDB2Q96T68 719 aa6.11□□□□□ -1.43
CLK1-206ENST00000461326 ABCB6Q9NP58 842 aa6.11□□□□□ -1.43
CLK1-206ENST00000461326 TMEM238LA0A1B0GVL6 79 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms