RNA–Protein interactions for RNA: ENST00000461217.1

COL16A1-206, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 852 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-206ENST00000461217 GPR108Q9NPR9 543 aa18.53■□□□□ 0.56
COL16A1-206ENST00000461217 SLC45A1Q9Y2W3 748 aa18.53■□□□□ 0.56
COL16A1-206ENST00000461217 PHIPQ8WWQ0 1821 aa18.52■□□□□ 0.56
COL16A1-206ENST00000461217 ATP8B2P98198 1209 aa18.52■□□□□ 0.56
COL16A1-206ENST00000461217 SSH3Q8TE77 659 aa18.52■□□□□ 0.56
COL16A1-206ENST00000461217 AATFQ9NY61 560 aaKnown RBP eCLIP18.52■□□□□ 0.56
COL16A1-206ENST00000461217 RCAN3Q9UKA8 241 aa18.52■□□□□ 0.56
COL16A1-206ENST00000461217 AGTPBP1Q9UPW5 1226 aa18.52■□□□□ 0.56
COL16A1-206ENST00000461217 PTPRFP10586 1907 aa18.51■□□□□ 0.55
COL16A1-206ENST00000461217 TNPO2O14787 897 aaKnown RBP18.51■□□□□ 0.55
COL16A1-206ENST00000461217 PLCG2P16885 1265 aa18.51■□□□□ 0.55
COL16A1-206ENST00000461217 UBXN2AP68543 259 aa18.51■□□□□ 0.55
COL16A1-206ENST00000461217 PNMA3Q9UL41 463 aa18.51■□□□□ 0.55
COL16A1-206ENST00000461217 MGAMO43451 1857 aa18.5■□□□□ 0.55
COL16A1-206ENST00000461217 SPP2Q13103 211 aa18.5■□□□□ 0.55
COL16A1-206ENST00000461217 SLAIN1Q8ND83 568 aa18.5■□□□□ 0.55
COL16A1-206ENST00000461217 NKX2-3Q8TAU0 364 aa18.5■□□□□ 0.55
COL16A1-206ENST00000461217 TRIM34Q9BYJ4 488 aa18.5■□□□□ 0.55
COL16A1-206ENST00000461217 HERC5Q9UII4 1024 aaKnown RBP18.5■□□□□ 0.55
COL16A1-206ENST00000461217 GABRQQ9UN88 632 aa18.5■□□□□ 0.55
COL16A1-206ENST00000461217 ATAD5Q96QE3 1844 aa18.5■□□□□ 0.55
COL16A1-206ENST00000461217 CCL5P13501 91 aa18.49■□□□□ 0.55
COL16A1-206ENST00000461217 CAP2P40123 477 aa18.49■□□□□ 0.55
COL16A1-206ENST00000461217 TREML2Q5T2D2 321 aa18.49■□□□□ 0.55
COL16A1-206ENST00000461217 CRACR2BQ8N4Y2 399 aaPredicted RBP18.49■□□□□ 0.55
COL16A1-206ENST00000461217 ANKRD13CQ8N6S4 541 aa18.49■□□□□ 0.55
COL16A1-206ENST00000461217 PROCA1Q8NCQ7 364 aaPredicted RBP18.49■□□□□ 0.55
COL16A1-206ENST00000461217 ZNF280CQ8ND82 737 aa18.49■□□□□ 0.55
COL16A1-206ENST00000461217 TGFBRAP1Q8WUH2 860 aa18.49■□□□□ 0.55
COL16A1-206ENST00000461217 TBC1D2Q9BYX2 928 aa18.49■□□□□ 0.55
COL16A1-206ENST00000461217 RNF208Q9H0X6 261 aa18.49■□□□□ 0.55
COL16A1-206ENST00000461217 DHX36Q9H2U1 1008 aaKnown RBP18.49■□□□□ 0.55
COL16A1-206ENST00000461217 AS3MTQ9HBK9 375 aa18.49■□□□□ 0.55
COL16A1-206ENST00000461217 PCDH10Q9P2E7 1040 aa18.49■□□□□ 0.55
COL16A1-206ENST00000461217 TAOK2Q9UL54 1235 aa18.49■□□□□ 0.55
COL16A1-206ENST00000461217 KIAA0100Q14667 2235 aaKnown RBP18.48■□□□□ 0.55
COL16A1-206ENST00000461217 ADCY3O60266 1144 aa18.48■□□□□ 0.55
COL16A1-206ENST00000461217 CYP2E1P05181 493 aaPredicted RBP18.48■□□□□ 0.55
COL16A1-206ENST00000461217 ZAP70P43403 619 aa18.48■□□□□ 0.55
COL16A1-206ENST00000461217 FLT3LGP49771 235 aa18.48■□□□□ 0.55
COL16A1-206ENST00000461217 HMGCS2P54868 508 aa18.48■□□□□ 0.55
COL16A1-206ENST00000461217 PABPC4Q13310 644 aaKnown RBP eCLIP18.48■□□□□ 0.55
COL16A1-206ENST00000461217 HABP4Q5JVS0 413 aaKnown RBP18.48■□□□□ 0.55
COL16A1-206ENST00000461217 MAPKAPK5Q8IW41 473 aa18.48■□□□□ 0.55
COL16A1-206ENST00000461217 PI4KBQ9UBF8 816 aa18.48■□□□□ 0.55
COL16A1-206ENST00000461217 LOC285556D6RIA3 1793 aa18.47■□□□□ 0.55
COL16A1-206ENST00000461217 USP17L5A8MUK1 530 aa18.47■□□□□ 0.55
COL16A1-206ENST00000461217 RLBP1P12271 317 aa18.47■□□□□ 0.55
COL16A1-206ENST00000461217 ADGRA1Q86SQ6 560 aa18.47■□□□□ 0.55
COL16A1-206ENST00000461217 COA7Q96BR5 231 aa18.47■□□□□ 0.55
COL16A1-206ENST00000461217 SHISA4Q96DD7 197 aa18.47■□□□□ 0.55
COL16A1-206ENST00000461217 CCDC8Q9H0W5 538 aaPredicted RBP18.47■□□□□ 0.55
COL16A1-206ENST00000461217 TLR7Q9NYK1 1049 aaKnown RBP18.47■□□□□ 0.55
COL16A1-206ENST00000461217 DBNLQ9UJU6 430 aaKnown RBP18.47■□□□□ 0.55
COL16A1-206ENST00000461217 FLT1P17948 1338 aa18.47■□□□□ 0.55
COL16A1-206ENST00000461217 ZBTB7BO15156 539 aaPredicted RBP18.46■□□□□ 0.55
COL16A1-206ENST00000461217 GJB1P08034 283 aa18.46■□□□□ 0.55
COL16A1-206ENST00000461217 ELNP15502 786 aa18.46■□□□□ 0.55
COL16A1-206ENST00000461217 RRP1BQ14684 758 aaKnown RBP18.46■□□□□ 0.55
COL16A1-206ENST00000461217 ZNF512BQ96KM6 892 aaPredicted RBP18.46■□□□□ 0.55
COL16A1-206ENST00000461217 PIH1D3Q9NQM4 214 aaKnown RBP18.46■□□□□ 0.55
COL16A1-206ENST00000461217 NOP58Q9Y2X3 529 aaKnown RBP18.46■□□□□ 0.55
COL16A1-206ENST00000461217 CENPFP49454 3210 aa18.45■□□□□ 0.54
COL16A1-206ENST00000461217 IDH1O75874 414 aaKnown RBP18.45■□□□□ 0.54
COL16A1-206ENST00000461217 NEFLP07196 543 aa18.45■□□□□ 0.54
COL16A1-206ENST00000461217 CYP7A1P22680 504 aa18.45■□□□□ 0.54
COL16A1-206ENST00000461217 GJA8P48165 433 aa18.45■□□□□ 0.54
COL16A1-206ENST00000461217 PPP4CP60510 307 aa18.45■□□□□ 0.54
COL16A1-206ENST00000461217 FAM110CQ1W6H9 321 aa18.45■□□□□ 0.54
COL16A1-206ENST00000461217 DPF3Q92784 378 aa18.45■□□□□ 0.54
COL16A1-206ENST00000461217 UNC93B1Q9H1C4 597 aa18.45■□□□□ 0.54
COL16A1-206ENST00000461217 SAP30BPQ9UHR5 308 aaKnown RBP18.45■□□□□ 0.54
COL16A1-206ENST00000461217 SUPT16HQ9Y5B9 1047 aaKnown RBP18.45■□□□□ 0.54
COL16A1-206ENST00000461217 SIPA1L1O43166 1804 aa18.44■□□□□ 0.54
COL16A1-206ENST00000461217 INHAP05111 366 aa18.44■□□□□ 0.54
COL16A1-206ENST00000461217 HLA-DOAP06340 250 aa18.44■□□□□ 0.54
COL16A1-206ENST00000461217 ASNSP08243 561 aa18.44■□□□□ 0.54
COL16A1-206ENST00000461217 GCLCP48506 637 aaPredicted RBP18.44■□□□□ 0.54
COL16A1-206ENST00000461217 MTMR2Q13614 643 aa18.44■□□□□ 0.54
COL16A1-206ENST00000461217 EAF2Q96CJ1 260 aaPredicted RBP18.44■□□□□ 0.54
COL16A1-206ENST00000461217 TMOD4Q9NZQ9 345 aa18.44■□□□□ 0.54
COL16A1-206ENST00000461217 PALD1Q9ULE6 856 aa18.44■□□□□ 0.54
COL16A1-206ENST00000461217 IGSF3O75054 1194 aa18.43■□□□□ 0.54
COL16A1-206ENST00000461217 GDF11O95390 407 aa18.43■□□□□ 0.54
COL16A1-206ENST00000461217 DYNLL1P63167 89 aaKnown RBP18.43■□□□□ 0.54
COL16A1-206ENST00000461217 IRX3P78415 501 aaPredicted RBP18.43■□□□□ 0.54
COL16A1-206ENST00000461217 IRF5Q13568 498 aa18.43■□□□□ 0.54
COL16A1-206ENST00000461217 CEP85Q6P2H3 762 aa18.43■□□□□ 0.54
COL16A1-206ENST00000461217 ERC1Q8IUD2 1116 aa18.43■□□□□ 0.54
COL16A1-206ENST00000461217 FOXP4Q8IVH2 680 aaPredicted RBP18.43■□□□□ 0.54
COL16A1-206ENST00000461217 PXYLP1Q8TE99 480 aa18.43■□□□□ 0.54
COL16A1-206ENST00000461217 U2AF1L4Q8WU68 220 aaKnown RBP18.43■□□□□ 0.54
COL16A1-206ENST00000461217 ASCC2Q9H1I8 757 aaPredicted RBP18.43■□□□□ 0.54
COL16A1-206ENST00000461217 EXOC6BQ9Y2D4 811 aa18.43■□□□□ 0.54
COL16A1-206ENST00000461217 FOCADQ5VW36 1801 aa18.43■□□□□ 0.54
COL16A1-206ENST00000461217 CDK5RAP2Q96SN8 1893 aa18.43■□□□□ 0.54
COL16A1-206ENST00000461217 MYO5AQ9Y4I1 1855 aaKnown RBP18.42■□□□□ 0.54
COL16A1-206ENST00000461217 H0YGN5 161 aa18.42■□□□□ 0.54
COL16A1-206ENST00000461217 USP5P45974 858 aa18.42■□□□□ 0.54
COL16A1-206ENST00000461217 SH3D19Q5HYK7 790 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms