RNA–Protein interactions for RNA: ENST00000447872.5

VSTM1-206, Transcript of V-set and transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene VSTM1, Length 1,041 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1-206ENST00000447872 TNNQ9UQP3 1299 aa12.73□□□□□ -0.37
VSTM1-206ENST00000447872 UNC80Q8N2C7 3258 aa12.73□□□□□ -0.37
VSTM1-206ENST00000447872 BRCA2P51587 3418 aa12.72□□□□□ -0.37
VSTM1-206ENST00000447872 GJB1P08034 283 aa12.72□□□□□ -0.37
VSTM1-206ENST00000447872 MCAMP43121 646 aa12.72□□□□□ -0.37
VSTM1-206ENST00000447872 OS9Q13438 667 aaPredicted RBP12.72□□□□□ -0.37
VSTM1-206ENST00000447872 ZKSCAN2Q63HK3 967 aa12.72□□□□□ -0.37
VSTM1-206ENST00000447872 TEX11Q8IYF3 940 aa12.72□□□□□ -0.37
VSTM1-206ENST00000447872 SLAIN1Q8ND83 568 aa12.72□□□□□ -0.37
VSTM1-206ENST00000447872 COL25A1Q9BXS0 654 aaPredicted RBP12.72□□□□□ -0.37
VSTM1-206ENST00000447872 RNF208Q9H0X6 261 aa12.72□□□□□ -0.37
VSTM1-206ENST00000447872 OSBPL5Q9H0X9 879 aaPredicted RBP12.72□□□□□ -0.37
VSTM1-206ENST00000447872 AGTPBP1Q9UPW5 1226 aa12.72□□□□□ -0.37
VSTM1-206ENST00000447872 FAM196BA6NMK8 535 aa12.71□□□□□ -0.37
VSTM1-206ENST00000447872 H0YGN5 161 aa12.71□□□□□ -0.37
VSTM1-206ENST00000447872 TNPO2O14787 897 aaKnown RBP12.71□□□□□ -0.37
VSTM1-206ENST00000447872 ADCY3O60266 1144 aa12.71□□□□□ -0.37
VSTM1-206ENST00000447872 BAG3O95817 575 aa12.71□□□□□ -0.37
VSTM1-206ENST00000447872 PLCG2P16885 1265 aa12.71□□□□□ -0.37
VSTM1-206ENST00000447872 GJA8P48165 433 aa12.71□□□□□ -0.37
VSTM1-206ENST00000447872 SPP2Q13103 211 aa12.71□□□□□ -0.37
VSTM1-206ENST00000447872 CCDC158Q5M9N0 1113 aa12.71□□□□□ -0.37
VSTM1-206ENST00000447872 TTC39AQ5SRH9 613 aa12.71□□□□□ -0.37
VSTM1-206ENST00000447872 NAA16Q6N069 864 aaPredicted RBP12.71□□□□□ -0.37
VSTM1-206ENST00000447872 CCDC84Q86UT8 332 aaPredicted RBP12.71□□□□□ -0.37
VSTM1-206ENST00000447872 TMEM57Q8N5G2 664 aa12.71□□□□□ -0.37
VSTM1-206ENST00000447872 PROCA1Q8NCQ7 364 aaPredicted RBP12.71□□□□□ -0.37
VSTM1-206ENST00000447872 ZNF280CQ8ND82 737 aa12.71□□□□□ -0.37
VSTM1-206ENST00000447872 DPF3Q92784 378 aa12.71□□□□□ -0.37
VSTM1-206ENST00000447872 ANP32EQ9BTT0 268 aa12.71□□□□□ -0.37
VSTM1-206ENST00000447872 TBC1D2Q9BYX2 928 aa12.71□□□□□ -0.37
VSTM1-206ENST00000447872 GPR108Q9NPR9 543 aa12.71□□□□□ -0.37
VSTM1-206ENST00000447872 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.71□□□□□ -0.37
VSTM1-206ENST00000447872 PI4KBQ9UBF8 816 aa12.71□□□□□ -0.37
VSTM1-206ENST00000447872 PNMA3Q9UL41 463 aa12.71□□□□□ -0.37
VSTM1-206ENST00000447872 GABRQQ9UN88 632 aa12.71□□□□□ -0.37
VSTM1-206ENST00000447872 KIAA0100Q14667 2235 aaKnown RBP12.7□□□□□ -0.38
VSTM1-206ENST00000447872 CEP290O15078 2479 aa12.7□□□□□ -0.38
VSTM1-206ENST00000447872 USP17L5A8MUK1 530 aa12.7□□□□□ -0.38
VSTM1-206ENST00000447872 MS4A1P11836 297 aa12.7□□□□□ -0.38
VSTM1-206ENST00000447872 CAP2P40123 477 aa12.7□□□□□ -0.38
VSTM1-206ENST00000447872 FLT3LGP49771 235 aa12.7□□□□□ -0.38
VSTM1-206ENST00000447872 PABPC4Q13310 644 aaKnown RBP eCLIP12.7□□□□□ -0.38
VSTM1-206ENST00000447872 POLA2Q14181 598 aa12.7□□□□□ -0.38
VSTM1-206ENST00000447872 ANKRD13CQ8N6S4 541 aa12.7□□□□□ -0.38
VSTM1-206ENST00000447872 SH3RF3Q8TEJ3 882 aaPredicted RBP12.7□□□□□ -0.38
VSTM1-206ENST00000447872 COA7Q96BR5 231 aa12.7□□□□□ -0.38
VSTM1-206ENST00000447872 DHX36Q9H2U1 1008 aaKnown RBP12.7□□□□□ -0.38
VSTM1-206ENST00000447872 SNRKQ9NRH2 765 aa12.7□□□□□ -0.38
VSTM1-206ENST00000447872 HERC5Q9UII4 1024 aaKnown RBP12.7□□□□□ -0.38
VSTM1-206ENST00000447872 SURF6O75683 361 aaKnown RBP12.69□□□□□ -0.38
VSTM1-206ENST00000447872 GCLCP48506 637 aaPredicted RBP12.69□□□□□ -0.38
VSTM1-206ENST00000447872 ATP8B2P98198 1209 aa12.69□□□□□ -0.38
VSTM1-206ENST00000447872 IRF5Q13568 498 aa12.69□□□□□ -0.38
VSTM1-206ENST00000447872 TNNI3KQ59H18 835 aa12.69□□□□□ -0.38
VSTM1-206ENST00000447872 TREML2Q5T2D2 321 aa12.69□□□□□ -0.38
VSTM1-206ENST00000447872 FTSJ3Q8IY81 847 aaKnown RBP12.69□□□□□ -0.38
VSTM1-206ENST00000447872 SSH3Q8TE77 659 aa12.69□□□□□ -0.38
VSTM1-206ENST00000447872 PXYLP1Q8TE99 480 aa12.69□□□□□ -0.38
VSTM1-206ENST00000447872 SHISA4Q96DD7 197 aa12.69□□□□□ -0.38
VSTM1-206ENST00000447872 AATFQ9NY61 560 aaKnown RBP eCLIP12.69□□□□□ -0.38
VSTM1-206ENST00000447872 FPGT-TNNI3KV9GXZ4 949 aa12.69□□□□□ -0.38
VSTM1-206ENST00000447872 ELNP15502 786 aa12.68□□□□□ -0.38
VSTM1-206ENST00000447872 HMGCS2P54868 508 aa12.68□□□□□ -0.38
VSTM1-206ENST00000447872 PPP4CP60510 307 aa12.68□□□□□ -0.38
VSTM1-206ENST00000447872 PDE3AQ14432 1141 aa12.68□□□□□ -0.38
VSTM1-206ENST00000447872 CENPQQ7L2Z9 268 aaPredicted RBP12.68□□□□□ -0.38
VSTM1-206ENST00000447872 FOXP4Q8IVH2 680 aaPredicted RBP12.68□□□□□ -0.38
VSTM1-206ENST00000447872 U2AF1L4Q8WU68 220 aaKnown RBP12.68□□□□□ -0.38
VSTM1-206ENST00000447872 TGFBRAP1Q8WUH2 860 aa12.68□□□□□ -0.38
VSTM1-206ENST00000447872 DBNDD2Q9BQY9 259 aa12.68□□□□□ -0.38
VSTM1-206ENST00000447872 HTATIP2Q9BUP3 242 aa12.68□□□□□ -0.38
VSTM1-206ENST00000447872 TRIM34Q9BYJ4 488 aa12.68□□□□□ -0.38
VSTM1-206ENST00000447872 UNC93B1Q9H1C4 597 aa12.68□□□□□ -0.38
VSTM1-206ENST00000447872 AS3MTQ9HBK9 375 aa12.68□□□□□ -0.38
VSTM1-206ENST00000447872 TAOK2Q9UL54 1235 aa12.68□□□□□ -0.38
VSTM1-206ENST00000447872 CENPFP49454 3210 aa12.68□□□□□ -0.38
VSTM1-206ENST00000447872 COL2A1P02458 1487 aaPredicted RBP12.67□□□□□ -0.38
VSTM1-206ENST00000447872 IGSF3O75054 1194 aa12.67□□□□□ -0.38
VSTM1-206ENST00000447872 SGPL1O95470 568 aa12.67□□□□□ -0.38
VSTM1-206ENST00000447872 TFRCP02786 760 aaKnown RBP12.67□□□□□ -0.38
VSTM1-206ENST00000447872 INHAP05111 366 aa12.67□□□□□ -0.38
VSTM1-206ENST00000447872 CYP2E1P05181 493 aaPredicted RBP12.67□□□□□ -0.38
VSTM1-206ENST00000447872 CAPN2P17655 700 aa12.67□□□□□ -0.38
VSTM1-206ENST00000447872 RRP1BQ14684 758 aaKnown RBP12.67□□□□□ -0.38
VSTM1-206ENST00000447872 FAM110CQ1W6H9 321 aa12.67□□□□□ -0.38
VSTM1-206ENST00000447872 UBE2Q1Q7Z7E8 422 aa12.67□□□□□ -0.38
VSTM1-206ENST00000447872 ITPRIPQ8IWB1 547 aa12.67□□□□□ -0.38
VSTM1-206ENST00000447872 CRACR2BQ8N4Y2 399 aaPredicted RBP12.67□□□□□ -0.38
VSTM1-206ENST00000447872 ZNF512BQ96KM6 892 aaPredicted RBP12.67□□□□□ -0.38
VSTM1-206ENST00000447872 WDR18Q9BV38 432 aa12.67□□□□□ -0.38
VSTM1-206ENST00000447872 ASCC2Q9H1I8 757 aaPredicted RBP12.67□□□□□ -0.38
VSTM1-206ENST00000447872 VCANP13611 3396 aa12.66□□□□□ -0.38
VSTM1-206ENST00000447872 FARP2O94887 1054 aaPredicted RBP12.66□□□□□ -0.38
VSTM1-206ENST00000447872 ASNSP08243 561 aa12.66□□□□□ -0.38
VSTM1-206ENST00000447872 ZAP70P43403 619 aa12.66□□□□□ -0.38
VSTM1-206ENST00000447872 SH3D19Q5HYK7 790 aa12.66□□□□□ -0.38
VSTM1-206ENST00000447872 CHRDL2Q6WN34 429 aa12.66□□□□□ -0.38
VSTM1-206ENST00000447872 MAPKAPK5Q8IW41 473 aa12.66□□□□□ -0.38
VSTM1-206ENST00000447872 C1orf115Q9H7X2 142 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms