RNA–Protein interactions for RNA: ENST00000443047.6

CHFR-204, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 2,990 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-204ENST00000443047 CSF1RP07333 972 aa17.3■□□□□ 0.36
CHFR-204ENST00000443047 KCNJ6P48051 423 aa17.3■□□□□ 0.36
CHFR-204ENST00000443047 BRD3Q15059 726 aa17.3■□□□□ 0.36
CHFR-204ENST00000443047 TOGARAM2Q6ZUX3 1019 aa17.3■□□□□ 0.36
CHFR-204ENST00000443047 NUTM2AQ8IVF1 878 aaPredicted RBP17.3■□□□□ 0.36
CHFR-204ENST00000443047 PNKPQ96T60 521 aa17.3■□□□□ 0.36
CHFR-204ENST00000443047 LZTFL1Q9NQ48 299 aa17.3■□□□□ 0.36
CHFR-204ENST00000443047 SLC3A2P08195 630 aaKnown RBP17.3■□□□□ 0.36
CHFR-204ENST00000443047 MCAMP43121 646 aa17.3■□□□□ 0.36
CHFR-204ENST00000443047 DHX32Q7L7V1 743 aaKnown RBP17.3■□□□□ 0.36
CHFR-204ENST00000443047 TEX13AQ9BXU3 409 aaPredicted RBP17.3■□□□□ 0.36
CHFR-204ENST00000443047 IBSPP21815 317 aaPredicted RBP17.29■□□□□ 0.36
CHFR-204ENST00000443047 ADKP55263 362 aaKnown RBP17.29■□□□□ 0.36
CHFR-204ENST00000443047 FBXW10Q5XX13 1052 aa17.29■□□□□ 0.36
CHFR-204ENST00000443047 EFCAB13Q8IY85 973 aa17.29■□□□□ 0.36
CHFR-204ENST00000443047 MRPS27Q92552 414 aaKnown RBP17.29■□□□□ 0.36
CHFR-204ENST00000443047 PCDHA7Q9UN72 937 aa17.29■□□□□ 0.36
CHFR-204ENST00000443047 CTDNEP1O95476 244 aa17.29■□□□□ 0.36
CHFR-204ENST00000443047 ATP6V1AP38606 617 aa17.29■□□□□ 0.36
CHFR-204ENST00000443047 TRIM28Q13263 835 aaKnown RBP17.29■□□□□ 0.36
CHFR-204ENST00000443047 SMIM5Q71RC9 77 aa17.29■□□□□ 0.36
CHFR-204ENST00000443047 NKX2-3Q8TAU0 364 aa17.29■□□□□ 0.36
CHFR-204ENST00000443047 ZNF622Q969S3 477 aaKnown RBP eCLIP17.29■□□□□ 0.369e-9■■□□□ 12.7
CHFR-204ENST00000443047 RIPOR2Q9Y4F9 1068 aa17.29■□□□□ 0.36
CHFR-204ENST00000443047 BCL9O00512 1426 aa17.29■□□□□ 0.36
CHFR-204ENST00000443047 ERLIN2O94905 339 aa17.28■□□□□ 0.36
CHFR-204ENST00000443047 CTSWP56202 376 aa17.28■□□□□ 0.36
CHFR-204ENST00000443047 KCNQ4P56696 695 aa17.28■□□□□ 0.36
CHFR-204ENST00000443047 DSCC1Q9BVC3 393 aa17.28■□□□□ 0.36
CHFR-204ENST00000443047 ITGB4P16144 1822 aa17.28■□□□□ 0.36
CHFR-204ENST00000443047 BAG1Q99933 345 aaPredicted RBP17.28■□□□□ 0.36
CHFR-204ENST00000443047 ALDH8A1Q9H2A2 487 aaPredicted RBP17.28■□□□□ 0.36
CHFR-204ENST00000443047 PATL2C9JE40 543 aaKnown RBP17.28■□□□□ 0.36
CHFR-204ENST00000443047 ERLIN1O75477 346 aa17.28■□□□□ 0.36
CHFR-204ENST00000443047 DHX8Q14562 1220 aaKnown RBP17.28■□□□□ 0.36
CHFR-204ENST00000443047 SUGP1Q8IWZ8 645 aaKnown RBP17.28■□□□□ 0.36
CHFR-204ENST00000443047 FGAP02671 866 aa17.27■□□□□ 0.36
CHFR-204ENST00000443047 TDO2P48775 406 aa17.27■□□□□ 0.36
CHFR-204ENST00000443047 CASP8Q14790 479 aa17.27■□□□□ 0.36
CHFR-204ENST00000443047 NCAPHQ15003 741 aa17.27■□□□□ 0.36
CHFR-204ENST00000443047 FMR1NBQ8N0W7 255 aaPredicted RBP17.27■□□□□ 0.36
CHFR-204ENST00000443047 KAT2BQ92831 832 aa17.27■□□□□ 0.36
CHFR-204ENST00000443047 ZNF396Q96N95 335 aaPredicted RBP17.27■□□□□ 0.36
CHFR-204ENST00000443047 ANKZF1Q9H8Y5 726 aa17.27■□□□□ 0.36
CHFR-204ENST00000443047 RFX7Q2KHR2 1363 aa17.27■□□□□ 0.36
CHFR-204ENST00000443047 RIC1Q4ADV7 1423 aa17.27■□□□□ 0.36
CHFR-204ENST00000443047 ANKRD18BA2A2Z9 1011 aa17.27■□□□□ 0.35
CHFR-204ENST00000443047 IDH1O75874 414 aaKnown RBP17.27■□□□□ 0.35
CHFR-204ENST00000443047 POLR3DP05423 398 aaPredicted RBP17.27■□□□□ 0.35
CHFR-204ENST00000443047 PHKA1P46020 1223 aa17.27■□□□□ 0.35
CHFR-204ENST00000443047 EXOSC10Q01780 885 aaKnown RBP17.27■□□□□ 0.35
CHFR-204ENST00000443047 DONSONQ9NYP3 566 aa17.27■□□□□ 0.35
CHFR-204ENST00000443047 A0A087WUV0 522 aaPredicted RBP17.26■□□□□ 0.35
CHFR-204ENST00000443047 ARHGAP6O43182 974 aa17.26■□□□□ 0.35
CHFR-204ENST00000443047 OTUD7BQ6GQQ9 843 aa17.26■□□□□ 0.35
CHFR-204ENST00000443047 NSUN7Q8NE18 718 aaKnown RBP17.26■□□□□ 0.35
CHFR-204ENST00000443047 GDAP1L1Q96MZ0 367 aa17.26■□□□□ 0.35
CHFR-204ENST00000443047 SEC31BQ9NQW1 1179 aa17.26■□□□□ 0.35
CHFR-204ENST00000443047 PTPDC1A2A3K4 754 aa17.26■□□□□ 0.35
CHFR-204ENST00000443047 PPFIA4O75335 1185 aa17.26■□□□□ 0.35
CHFR-204ENST00000443047 L1RE1Q9UN81 338 aa17.26■□□□□ 0.35
CHFR-204ENST00000443047 STK38Q15208 465 aa17.25■□□□□ 0.35
CHFR-204ENST00000443047 CNPY4Q8N129 248 aa17.25■□□□□ 0.35
CHFR-204ENST00000443047 PLA2G12BQ9BX93 195 aa17.25■□□□□ 0.35
CHFR-204ENST00000443047 PIH1D3Q9NQM4 214 aaKnown RBP17.25■□□□□ 0.35
CHFR-204ENST00000443047 GJB4Q9NTQ9 266 aa17.25■□□□□ 0.35
CHFR-204ENST00000443047 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.25■□□□□ 0.35
CHFR-204ENST00000443047 NHSL1Q5SYE7 1610 aa17.25■□□□□ 0.35
CHFR-204ENST00000443047 RPS6KA5O75582 802 aa17.25■□□□□ 0.35
CHFR-204ENST00000443047 VSNL1P62760 191 aa17.25■□□□□ 0.35
CHFR-204ENST00000443047 CLIC6Q96NY7 704 aa17.25■□□□□ 0.35
CHFR-204ENST00000443047 FANCLQ9NW38 375 aa17.25■□□□□ 0.35
CHFR-204ENST00000443047 LAMA4Q16363 1823 aa17.25■□□□□ 0.35
CHFR-204ENST00000443047 GPAA1O43292 621 aa17.25■□□□□ 0.35
CHFR-204ENST00000443047 CCT5P48643 541 aa17.25■□□□□ 0.35
CHFR-204ENST00000443047 SWT1Q5T5J6 900 aaKnown RBP17.25■□□□□ 0.35
CHFR-204ENST00000443047 SLC9C2Q5TAH2 1124 aa17.25■□□□□ 0.35
CHFR-204ENST00000443047 SUSD4Q5VX71 490 aa17.25■□□□□ 0.35
CHFR-204ENST00000443047 SRGAP1Q7Z6B7 1085 aa17.25■□□□□ 0.35
CHFR-204ENST00000443047 KIFC2Q96AC6 838 aa17.25■□□□□ 0.35
CHFR-204ENST00000443047 INCENPQ9NQS7 918 aa17.25■□□□□ 0.35
CHFR-204ENST00000443047 DISP2A7MBM2 1401 aa17.24■□□□□ 0.35
CHFR-204ENST00000443047 PFKFB2O60825 505 aa17.24■□□□□ 0.35
CHFR-204ENST00000443047 HNRNPH1P31943 449 aaKnown RBP17.24■□□□□ 0.35
CHFR-204ENST00000443047 GSCP56915 257 aaPredicted RBP17.24■□□□□ 0.35
CHFR-204ENST00000443047 MTF1Q14872 753 aa17.24■□□□□ 0.35
CHFR-204ENST00000443047 KIF4BQ2VIQ3 1234 aa17.24■□□□□ 0.35
CHFR-204ENST00000443047 CEP89Q96ST8 783 aa17.24■□□□□ 0.35
CHFR-204ENST00000443047 CUTAO60888 179 aa17.24■□□□□ 0.35
CHFR-204ENST00000443047 PDIA3P30101 505 aaKnown RBP17.24■□□□□ 0.35
CHFR-204ENST00000443047 NLRP12P59046 1061 aa17.24■□□□□ 0.35
CHFR-204ENST00000443047 RIN2Q8WYP3 895 aaPredicted RBP17.24■□□□□ 0.35
CHFR-204ENST00000443047 JPH2Q9BR39 696 aaPredicted RBP17.24■□□□□ 0.35
CHFR-204ENST00000443047 A0A0U1RQJ8 604 aa17.23■□□□□ 0.35
CHFR-204ENST00000443047 KCNQ2O43526 872 aa17.23■□□□□ 0.35
CHFR-204ENST00000443047 RNF40O75150 1001 aa17.23■□□□□ 0.35
CHFR-204ENST00000443047 STK11IPQ8N1F8 1099 aa17.23■□□□□ 0.35
CHFR-204ENST00000443047 ATRIPQ8WXE1 791 aa17.23■□□□□ 0.35
CHFR-204ENST00000443047 LRRIQ3A6PVS8 624 aaPredicted RBP17.23■□□□□ 0.35
CHFR-204ENST00000443047 ZNF202O95125 648 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms