RNA–Protein interactions for RNA: ENST00000441679.1

EPHA4-208, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 565 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-208ENST00000441679 DDX54Q8TDD1 881 aaKnown RBP9.6□□□□□ -0.87
EPHA4-208ENST00000441679 MAP3K5Q99683 1374 aa9.6□□□□□ -0.87
EPHA4-208ENST00000441679 BCL9LQ86UU0 1499 aa9.59□□□□□ -0.87
EPHA4-208ENST00000441679 PEAK1Q9H792 1746 aa9.59□□□□□ -0.87
EPHA4-208ENST00000441679 OVOS2A0A0G2JMS6 1433 aa9.59□□□□□ -0.87
EPHA4-208ENST00000441679 LMO7Q8WWI1 1683 aa9.59□□□□□ -0.87
EPHA4-208ENST00000441679 PHKG2P15735 406 aa9.59□□□□□ -0.87
EPHA4-208ENST00000441679 TNP2Q05952 138 aa9.59□□□□□ -0.87
EPHA4-208ENST00000441679 SFSWAPQ12872 951 aaKnown RBP9.59□□□□□ -0.87
EPHA4-208ENST00000441679 CCDC74AQ96AQ1 378 aa9.59□□□□□ -0.87
EPHA4-208ENST00000441679 PNMA5Q96PV4 448 aa9.59□□□□□ -0.87
EPHA4-208ENST00000441679 BACH2Q9BYV9 841 aa9.59□□□□□ -0.87
EPHA4-208ENST00000441679 RNF19AQ9NV58 838 aa9.59□□□□□ -0.87
EPHA4-208ENST00000441679 RNMTO43148 476 aaKnown RBP9.58□□□□□ -0.88
EPHA4-208ENST00000441679 THBS1P07996 1170 aa9.58□□□□□ -0.88
EPHA4-208ENST00000441679 MAPTP10636 758 aaKnown RBP9.58□□□□□ -0.88
EPHA4-208ENST00000441679 DBN1Q16643 649 aa9.58□□□□□ -0.88
EPHA4-208ENST00000441679 USPL1Q5W0Q7 1092 aa9.58□□□□□ -0.88
EPHA4-208ENST00000441679 FAM196AQ6ZSG2 479 aa9.58□□□□□ -0.88
EPHA4-208ENST00000441679 TEX13AQ9BXU3 409 aaPredicted RBP9.58□□□□□ -0.88
EPHA4-208ENST00000441679 MARK1Q9P0L2 795 aa9.58□□□□□ -0.88
EPHA4-208ENST00000441679 ABCA3Q99758 1704 aa9.57□□□□□ -0.88
EPHA4-208ENST00000441679 CHL1O00533 1208 aa9.57□□□□□ -0.88
EPHA4-208ENST00000441679 SCAMP3O14828 347 aaKnown RBP9.57□□□□□ -0.88
EPHA4-208ENST00000441679 GIPC1O14908 333 aa9.57□□□□□ -0.88
EPHA4-208ENST00000441679 SASH3O75995 380 aa9.57□□□□□ -0.88
EPHA4-208ENST00000441679 CES1P23141 567 aa9.57□□□□□ -0.88
EPHA4-208ENST00000441679 ITGA6P23229 1130 aa9.57□□□□□ -0.88
EPHA4-208ENST00000441679 SLFN5Q08AF3 891 aa9.57□□□□□ -0.88
EPHA4-208ENST00000441679 UBAP2LQ14157 1087 aaKnown RBP9.57□□□□□ -0.88
EPHA4-208ENST00000441679 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.57□□□□□ -0.88
EPHA4-208ENST00000441679 KRT25Q7Z3Z0 450 aa9.57□□□□□ -0.88
EPHA4-208ENST00000441679 TTC5Q8N0Z6 440 aa9.57□□□□□ -0.88
EPHA4-208ENST00000441679 C1orf127Q8N9H9 656 aa9.57□□□□□ -0.88
EPHA4-208ENST00000441679 TMEM87AQ8NBN3 555 aa9.57□□□□□ -0.88
EPHA4-208ENST00000441679 SMARCC1Q92922 1105 aaPredicted RBP9.57□□□□□ -0.88
EPHA4-208ENST00000441679 GSX2Q9BZM3 304 aa9.57□□□□□ -0.88
EPHA4-208ENST00000441679 CHRDQ9H2X0 955 aa9.57□□□□□ -0.88
EPHA4-208ENST00000441679 EFCC1Q9HA90 598 aa9.57□□□□□ -0.88
EPHA4-208ENST00000441679 GMPR2Q9P2T1 348 aaKnown RBP9.57□□□□□ -0.88
EPHA4-208ENST00000441679 PHF24Q9UPV7 400 aa9.57□□□□□ -0.88
EPHA4-208ENST00000441679 RRP7AQ9Y3A4 280 aaKnown RBP9.57□□□□□ -0.88
EPHA4-208ENST00000441679 AK5Q9Y6K8 562 aa9.57□□□□□ -0.88
EPHA4-208ENST00000441679 BTBD11A6QL63 1104 aa9.56□□□□□ -0.88
EPHA4-208ENST00000441679 EREGO14944 169 aa9.56□□□□□ -0.88
EPHA4-208ENST00000441679 BNIP3LO60238 219 aa9.56□□□□□ -0.88
EPHA4-208ENST00000441679 HOXB7P09629 217 aa9.56□□□□□ -0.88
EPHA4-208ENST00000441679 RARAP10276 462 aa9.56□□□□□ -0.88
EPHA4-208ENST00000441679 EIF4BP23588 611 aaKnown RBP9.56□□□□□ -0.88
EPHA4-208ENST00000441679 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.56□□□□□ -0.88
EPHA4-208ENST00000441679 SLC52A2Q9HAB3 445 aa9.56□□□□□ -0.88
EPHA4-208ENST00000441679 CUEDC1Q9NWM3 386 aaPredicted RBP9.56□□□□□ -0.88
EPHA4-208ENST00000441679 TMOD3Q9NYL9 352 aa9.56□□□□□ -0.88
EPHA4-208ENST00000441679 CNTN3Q9P232 1028 aa9.56□□□□□ -0.88
EPHA4-208ENST00000441679 ATXN7L1Q9ULK2 861 aaPredicted RBP9.56□□□□□ -0.88
EPHA4-208ENST00000441679 LAS1LQ9Y4W2 734 aaKnown RBP9.56□□□□□ -0.88
EPHA4-208ENST00000441679 RGPD1P0DJD0 1748 aa9.56□□□□□ -0.88
EPHA4-208ENST00000441679 ATRNO75882 1429 aa9.56□□□□□ -0.88
EPHA4-208ENST00000441679 ZNF521Q96K83 1311 aa9.56□□□□□ -0.88
EPHA4-208ENST00000441679 PHF20L1A8MW92 1017 aa9.55□□□□□ -0.88
EPHA4-208ENST00000441679 CYP27B1O15528 508 aa9.55□□□□□ -0.88
EPHA4-208ENST00000441679 FOXR1Q6PIV2 292 aa9.55□□□□□ -0.88
EPHA4-208ENST00000441679 MPRIPQ6WCQ1 1025 aa9.55□□□□□ -0.88
EPHA4-208ENST00000441679 KRT27Q7Z3Y8 459 aa9.55□□□□□ -0.88
EPHA4-208ENST00000441679 GALNT12Q8IXK2 581 aa9.55□□□□□ -0.88
EPHA4-208ENST00000441679 TRMT2AQ8IZ69 625 aaKnown RBP9.55□□□□□ -0.88
EPHA4-208ENST00000441679 IL17REQ8NFR9 667 aa9.55□□□□□ -0.88
EPHA4-208ENST00000441679 ZNF837Q96EG3 531 aaPredicted RBP9.55□□□□□ -0.88
EPHA4-208ENST00000441679 ABHD17AQ96GS6 310 aa9.55□□□□□ -0.88
EPHA4-208ENST00000441679 NPHS2Q9NP85 383 aa9.55□□□□□ -0.88
EPHA4-208ENST00000441679 NDFIP2Q9NV92 336 aa9.55□□□□□ -0.88
EPHA4-208ENST00000441679 TSPYL4Q9UJ04 414 aa9.55□□□□□ -0.88
EPHA4-208ENST00000441679 CEMIPQ8WUJ3 1361 aa9.54□□□□□ -0.88
EPHA4-208ENST00000441679 GADD45BO75293 160 aaPredicted RBP9.54□□□□□ -0.88
EPHA4-208ENST00000441679 ZNF853P0CG23 659 aa9.54□□□□□ -0.88
EPHA4-208ENST00000441679 TARSP26639 723 aaKnown RBP9.54□□□□□ -0.88
EPHA4-208ENST00000441679 SPEM2Q0P670 501 aa9.54□□□□□ -0.88
EPHA4-208ENST00000441679 MCM10Q7L590 875 aa9.54□□□□□ -0.88
EPHA4-208ENST00000441679 EPS8L3Q8TE67 593 aaKnown RBP9.54□□□□□ -0.88
EPHA4-208ENST00000441679 GTPBP3Q969Y2 492 aaKnown RBP9.54□□□□□ -0.88
EPHA4-208ENST00000441679 CRELD1Q96HD1 420 aa9.54□□□□□ -0.88
EPHA4-208ENST00000441679 TRERF1Q96PN7 1200 aa9.54□□□□□ -0.88
EPHA4-208ENST00000441679 C12orf49Q9H741 205 aa9.54□□□□□ -0.88
EPHA4-208ENST00000441679 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.54□□□□□ -0.88
EPHA4-208ENST00000441679 RGPD5Q99666 1765 aa9.54□□□□□ -0.88
EPHA4-208ENST00000441679 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.53□□□□□ -0.88
EPHA4-208ENST00000441679 LRP6O75581 1613 aa9.53□□□□□ -0.88
EPHA4-208ENST00000441679 IPO8O15397 1037 aaKnown RBP9.53□□□□□ -0.88
EPHA4-208ENST00000441679 POLR3DP05423 398 aaPredicted RBP9.53□□□□□ -0.88
EPHA4-208ENST00000441679 PSAPP07602 524 aa9.53□□□□□ -0.88
EPHA4-208ENST00000441679 EDN3P14138 238 aa9.53□□□□□ -0.88
EPHA4-208ENST00000441679 NFKB1P19838 968 aa9.53□□□□□ -0.88
EPHA4-208ENST00000441679 IRS1P35568 1242 aa9.53□□□□□ -0.88
EPHA4-208ENST00000441679 FMNL2Q96PY5 1086 aa9.53□□□□□ -0.88
EPHA4-208ENST00000441679 SRCIN1Q9C0H9 1055 aa9.53□□□□□ -0.88
EPHA4-208ENST00000441679 LGR6Q9HBX8 967 aa9.53□□□□□ -0.88
EPHA4-208ENST00000441679 PARP4Q9UKK3 1724 aaKnown RBP9.53□□□□□ -0.88
EPHA4-208ENST00000441679 PLCH1Q4KWH8 1693 aa9.52□□□□□ -0.89
EPHA4-208ENST00000441679 DISP2A7MBM2 1401 aa9.52□□□□□ -0.89
EPHA4-208ENST00000441679 BCL9O00512 1426 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms