RNA–Protein interactions for RNA: ENST00000440647.1

CHD6-204, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 3

Gene CHD6, Length 536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-204ENST00000440647 ROCK2O75116 1388 aaKnown RBP8.36□□□□□ -1.07
CHD6-204ENST00000440647 PARD3Q8TEW0 1356 aa8.36□□□□□ -1.07
CHD6-204ENST00000440647 AKAP12Q02952 1782 aa8.36□□□□□ -1.07
CHD6-204ENST00000440647 SLIT3O75094 1523 aa8.36□□□□□ -1.07
CHD6-204ENST00000440647 C8orf34Q49A92 452 aa8.36□□□□□ -1.07
CHD6-204ENST00000440647 TMEM63CQ9P1W3 806 aa8.36□□□□□ -1.07
CHD6-204ENST00000440647 POLIQ9UNA4 740 aa8.36□□□□□ -1.07
CHD6-204ENST00000440647 CRB1P82279 1406 aa8.36□□□□□ -1.07
CHD6-204ENST00000440647 LRRC37A3O60309 1634 aa8.36□□□□□ -1.07
CHD6-204ENST00000440647 ICMTO60725 284 aa8.35□□□□□ -1.07
CHD6-204ENST00000440647 KIF4AO95239 1232 aa8.35□□□□□ -1.07
CHD6-204ENST00000440647 ELNP15502 786 aa8.35□□□□□ -1.07
CHD6-204ENST00000440647 ZNF211Q13398 564 aaPredicted RBP8.35□□□□□ -1.07
CHD6-204ENST00000440647 GRIK4Q16099 956 aa8.35□□□□□ -1.07
CHD6-204ENST00000440647 RSPO4Q2I0M5 234 aaPredicted RBP8.35□□□□□ -1.07
CHD6-204ENST00000440647 COL13A1Q5TAT6 717 aaPredicted RBP8.35□□□□□ -1.07
CHD6-204ENST00000440647 WFDC8Q8IUA0 241 aa8.35□□□□□ -1.07
CHD6-204ENST00000440647 DTWD1Q8N5C7 304 aa8.35□□□□□ -1.07
CHD6-204ENST00000440647 SPACA7Q96KW9 195 aa8.35□□□□□ -1.07
CHD6-204ENST00000440647 TPSG1Q9NRR2 321 aa8.35□□□□□ -1.07
CHD6-204ENST00000440647 OVOS2A0A0G2JMS6 1433 aa8.35□□□□□ -1.07
CHD6-204ENST00000440647 OVOS2A0A0J9YW53 1432 aa8.35□□□□□ -1.07
CHD6-204ENST00000440647 OVOS2Q6IE36 1432 aa8.35□□□□□ -1.07
CHD6-204ENST00000440647 CYP2E1P05181 493 aaPredicted RBP8.34□□□□□ -1.07
CHD6-204ENST00000440647 HMGB1P09429 215 aaKnown RBP8.34□□□□□ -1.07
CHD6-204ENST00000440647 USP5P45974 858 aa8.34□□□□□ -1.07
CHD6-204ENST00000440647 NKAPLQ5M9Q1 402 aa8.34□□□□□ -1.07
CHD6-204ENST00000440647 TOM1L2Q6ZVM7 507 aa8.34□□□□□ -1.07
CHD6-204ENST00000440647 FMR1NBQ8N0W7 255 aaPredicted RBP8.34□□□□□ -1.07
CHD6-204ENST00000440647 CAMKK2Q96RR4 588 aa8.34□□□□□ -1.07
CHD6-204ENST00000440647 CNTN3Q9P232 1028 aa8.34□□□□□ -1.07
CHD6-204ENST00000440647 RGPD3A6NKT7 1758 aaPredicted RBP8.34□□□□□ -1.07
CHD6-204ENST00000440647 RGPD4Q7Z3J3 1758 aa8.34□□□□□ -1.07
CHD6-204ENST00000440647 RGPD5Q99666 1765 aa8.34□□□□□ -1.07
CHD6-204ENST00000440647 AATKQ6ZMQ8 1374 aa8.34□□□□□ -1.07
CHD6-204ENST00000440647 SBF2Q86WG5 1849 aa8.33□□□□□ -1.08
CHD6-204ENST00000440647 A6NHS1 94 aa8.33□□□□□ -1.08
CHD6-204ENST00000440647 FZD6O60353 706 aa8.33□□□□□ -1.08
CHD6-204ENST00000440647 SERPINB4P48594 390 aa8.33□□□□□ -1.08
CHD6-204ENST00000440647 CPSF1Q10570 1443 aaKnown RBP8.33□□□□□ -1.08
CHD6-204ENST00000440647 MON2Q7Z3U7 1717 aa8.33□□□□□ -1.08
CHD6-204ENST00000440647 COL18A1P39060 1754 aa8.33□□□□□ -1.08
CHD6-204ENST00000440647 PEAK1Q9H792 1746 aa8.32□□□□□ -1.08
CHD6-204ENST00000440647 EHHADHQ08426 723 aa8.32□□□□□ -1.08
CHD6-204ENST00000440647 DDB1Q16531 1140 aa8.32□□□□□ -1.08
CHD6-204ENST00000440647 CACTIN-AS1Q8N1I8 211 aa8.32□□□□□ -1.08
CHD6-204ENST00000440647 C1orf127Q8N9H9 656 aa8.32□□□□□ -1.08
CHD6-204ENST00000440647 KCNH5Q8NCM2 988 aa8.32□□□□□ -1.08
CHD6-204ENST00000440647 PMEPA1Q969W9 287 aa8.32□□□□□ -1.08
CHD6-204ENST00000440647 LENG1Q96BZ8 264 aaPredicted RBP8.32□□□□□ -1.08
CHD6-204ENST00000440647 SIN3AQ96ST3 1273 aa8.32□□□□□ -1.08
CHD6-204ENST00000440647 CCDC87Q9NVE4 849 aa8.32□□□□□ -1.08
CHD6-204ENST00000440647 KTN1Q86UP2 1357 aaKnown RBP8.32□□□□□ -1.08
CHD6-204ENST00000440647 TTC21BQ7Z4L5 1316 aa8.31□□□□□ -1.08
CHD6-204ENST00000440647 WDR17Q8IZU2 1322 aa8.31□□□□□ -1.08
CHD6-204ENST00000440647 TTC21AQ8NDW8 1320 aa8.31□□□□□ -1.08
CHD6-204ENST00000440647 ECM1Q16610 540 aa8.31□□□□□ -1.08
CHD6-204ENST00000440647 GDF6Q6KF10 455 aaPredicted RBP8.31□□□□□ -1.08
CHD6-204ENST00000440647 NCAPG2Q86XI2 1143 aa8.31□□□□□ -1.08
CHD6-204ENST00000440647 FBXO11Q86XK2 927 aa8.31□□□□□ -1.08
CHD6-204ENST00000440647 IL22RA1Q8N6P7 574 aa8.31□□□□□ -1.08
CHD6-204ENST00000440647 SALL4Q9UJQ4 1053 aa8.31□□□□□ -1.08
CHD6-204ENST00000440647 LTN1O94822 1766 aa8.3□□□□□ -1.08
CHD6-204ENST00000440647 ABCC6O95255 1503 aa8.3□□□□□ -1.08
CHD6-204ENST00000440647 SCO2A0A1W2PP80 73 aa8.3□□□□□ -1.08
CHD6-204ENST00000440647 H3BRB1 525 aa8.3□□□□□ -1.08
CHD6-204ENST00000440647 DYRK3O43781 588 aa8.3□□□□□ -1.08
CHD6-204ENST00000440647 H2AFB1P0C5Y9 115 aa8.3□□□□□ -1.08
CHD6-204ENST00000440647 H2AFB2P0C5Z0 115 aa8.3□□□□□ -1.08
CHD6-204ENST00000440647 SELPP16109 830 aa8.3□□□□□ -1.08
CHD6-204ENST00000440647 CES1P23141 567 aa8.3□□□□□ -1.08
CHD6-204ENST00000440647 ITGB7P26010 798 aa8.3□□□□□ -1.08
CHD6-204ENST00000440647 ADGRE1Q14246 886 aa8.3□□□□□ -1.08
CHD6-204ENST00000440647 TXNRD3Q86VQ6 643 aa8.3□□□□□ -1.08
CHD6-204ENST00000440647 GLYCTKQ8IVS8 523 aa8.3□□□□□ -1.08
CHD6-204ENST00000440647 CEP120Q8N960 986 aa8.3□□□□□ -1.08
CHD6-204ENST00000440647 TUT1Q9H6E5 874 aaKnown RBP8.3□□□□□ -1.08
CHD6-204ENST00000440647 PPP1R1BQ9UD71 204 aaPredicted RBP8.3□□□□□ -1.08
CHD6-204ENST00000440647 TRIM33Q9UPN9 1127 aa8.3□□□□□ -1.08
CHD6-204ENST00000440647 NFAT5O94916 1531 aa8.29□□□□□ -1.08
CHD6-204ENST00000440647 SMNDC1O75940 238 aaKnown RBP eCLIP8.29□□□□□ -1.08
CHD6-204ENST00000440647 ATP11AP98196 1134 aa8.29□□□□□ -1.08
CHD6-204ENST00000440647 CEP135Q66GS9 1140 aa8.29□□□□□ -1.08
CHD6-204ENST00000440647 CCER1Q8TC90 406 aaPredicted RBP8.29□□□□□ -1.08
CHD6-204ENST00000440647 PBX4Q9BYU1 374 aa8.29□□□□□ -1.08
CHD6-204ENST00000440647 RASSF4Q9H2L5 321 aa8.29□□□□□ -1.08
CHD6-204ENST00000440647 KANSL3Q9P2N6 904 aa8.29□□□□□ -1.08
CHD6-204ENST00000440647 USP54Q70EL1 1684 aa8.29□□□□□ -1.08
CHD6-204ENST00000440647 CCDC7Q96M83 1385 aa8.28□□□□□ -1.08
CHD6-204ENST00000440647 TNFRSF21O75509 655 aa8.28□□□□□ -1.08
CHD6-204ENST00000440647 MBTPS1Q14703 1052 aa8.28□□□□□ -1.08
CHD6-204ENST00000440647 ARHGEF25Q86VW2 580 aa8.28□□□□□ -1.08
CHD6-204ENST00000440647 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.28□□□□□ -1.084e-7■■□□□ 14.3
CHD6-204ENST00000440647 GJD3Q8N144 294 aa8.28□□□□□ -1.08
CHD6-204ENST00000440647 TMC1Q8TDI8 760 aa8.28□□□□□ -1.08
CHD6-204ENST00000440647 CARD10Q9BWT7 1032 aa8.28□□□□□ -1.08
CHD6-204ENST00000440647 CARD11Q9BXL7 1154 aa8.28□□□□□ -1.08
CHD6-204ENST00000440647 MUC3BQ9H195 1237 aa8.28□□□□□ -1.08
CHD6-204ENST00000440647 CHRDQ9H2X0 955 aa8.28□□□□□ -1.08
CHD6-204ENST00000440647 SPON1Q9HCB6 807 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms