RNA–Protein interactions for RNA: ENST00000434435.1

SMARCAL1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-208ENST00000434435 STAG1Q8WVM7 1258 aa27.53■■■□□ 2
SMARCAL1-208ENST00000434435 RNF41Q9H4P4 317 aaPredicted RBP27.53■■■□□ 2
SMARCAL1-208ENST00000434435 PCP11498 1178 aaKnown RBP27.52■■■□□ 2
SMARCAL1-208ENST00000434435 LDHDQ86WU2 507 aa27.52■■■□□ 2
SMARCAL1-208ENST00000434435 STK11IPQ8N1F8 1099 aa27.52■■■□□ 2
SMARCAL1-208ENST00000434435 TRIM34Q9BYJ4 488 aa27.52■■■□□ 2
SMARCAL1-208ENST00000434435 SERPINB13Q9UIV8 391 aa27.52■■■□□ 2
SMARCAL1-208ENST00000434435 TAOK2Q9UL54 1235 aa27.52■■■□□ 2
SMARCAL1-208ENST00000434435 TAF6LQ9Y6J9 622 aa27.52■■■□□ 2
SMARCAL1-208ENST00000434435 ATAD5Q96QE3 1844 aa27.51■■□□□ 1.99
SMARCAL1-208ENST00000434435 E7EWF7 191 aa27.51■■□□□ 1.99
SMARCAL1-208ENST00000434435 SMIM22K7EJ46 135 aa27.51■■□□□ 1.99
SMARCAL1-208ENST00000434435 PDE4BQ07343 736 aa27.51■■□□□ 1.99
SMARCAL1-208ENST00000434435 MFSD6Q6ZSS7 791 aa27.51■■□□□ 1.99
SMARCAL1-208ENST00000434435 KRT26Q7Z3Y9 468 aa27.51■■□□□ 1.99
SMARCAL1-208ENST00000434435 CRACR2BQ8N4Y2 399 aaPredicted RBP27.51■■□□□ 1.99
SMARCAL1-208ENST00000434435 TEPSINQ96N21 525 aa27.51■■□□□ 1.99
SMARCAL1-208ENST00000434435 GPBP1L1Q9HC44 474 aaPredicted RBP27.51■■□□□ 1.99
SMARCAL1-208ENST00000434435 POTEIP0CG38 1075 aa27.5■■□□□ 1.99
SMARCAL1-208ENST00000434435 POTEJP0CG39 1038 aa27.5■■□□□ 1.99
SMARCAL1-208ENST00000434435 STOX1Q6ZVD7 989 aa27.5■■□□□ 1.99
SMARCAL1-208ENST00000434435 C16orf86Q6ZW13 317 aa27.5■■□□□ 1.99
SMARCAL1-208ENST00000434435 FOXP4Q8IVH2 680 aaPredicted RBP27.5■■□□□ 1.99
SMARCAL1-208ENST00000434435 DYNLL2Q96FJ2 89 aa27.5■■□□□ 1.99
SMARCAL1-208ENST00000434435 ZNF287Q9HBT7 754 aa27.5■■□□□ 1.99
SMARCAL1-208ENST00000434435 SWAP70Q9UH65 585 aa27.5■■□□□ 1.99
SMARCAL1-208ENST00000434435 ADM5C9JUS6 153 aa27.49■■□□□ 1.99
SMARCAL1-208ENST00000434435 GABPAQ06546 454 aa27.49■■□□□ 1.99
SMARCAL1-208ENST00000434435 TRDNQ13061 729 aa27.49■■□□□ 1.99
SMARCAL1-208ENST00000434435 CDAN1Q8IWY9 1227 aa27.49■■□□□ 1.99
SMARCAL1-208ENST00000434435 HOOK2Q96ED9 719 aa27.49■■□□□ 1.99
SMARCAL1-208ENST00000434435 IL17RAQ96F46 866 aa27.49■■□□□ 1.99
SMARCAL1-208ENST00000434435 CNNM2Q9H8M5 875 aa27.49■■□□□ 1.99
SMARCAL1-208ENST00000434435 HERC5Q9UII4 1024 aaKnown RBP27.49■■□□□ 1.99
SMARCAL1-208ENST00000434435 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.49■■□□□ 1.99
SMARCAL1-208ENST00000434435 NEDD4P46934 1319 aa27.48■■□□□ 1.99
SMARCAL1-208ENST00000434435 CDC37L1Q7L3B6 337 aa27.48■■□□□ 1.99
SMARCAL1-208ENST00000434435 RALYLQ86SE5 291 aaKnown RBP27.48■■□□□ 1.99
SMARCAL1-208ENST00000434435 TOMM22Q9NS69 142 aa27.48■■□□□ 1.99
SMARCAL1-208ENST00000434435 TRPM7Q96QT4 1865 aa27.47■■□□□ 1.99
SMARCAL1-208ENST00000434435 ORC4O43929 436 aa27.47■■□□□ 1.99
SMARCAL1-208ENST00000434435 FGRP09769 529 aa27.47■■□□□ 1.99
SMARCAL1-208ENST00000434435 PSMA5P28066 241 aa27.47■■□□□ 1.99
SMARCAL1-208ENST00000434435 CDK8P49336 464 aa27.47■■□□□ 1.99
SMARCAL1-208ENST00000434435 ADCK5Q3MIX3 580 aa27.47■■□□□ 1.99
SMARCAL1-208ENST00000434435 METTL16Q86W50 562 aaKnown RBP27.47■■□□□ 1.99
SMARCAL1-208ENST00000434435 SLC44A5Q8NCS7 719 aa27.47■■□□□ 1.99
SMARCAL1-208ENST00000434435 NCOA7Q8NI08 942 aa27.47■■□□□ 1.99
SMARCAL1-208ENST00000434435 JAKMIP1Q96N16 626 aaKnown RBP27.47■■□□□ 1.99
SMARCAL1-208ENST00000434435 KRT23Q9C075 422 aa27.47■■□□□ 1.99
SMARCAL1-208ENST00000434435 MKNK2Q9HBH9 465 aa27.47■■□□□ 1.99
SMARCAL1-208ENST00000434435 TACC3Q9Y6A5 838 aa27.47■■□□□ 1.99
SMARCAL1-208ENST00000434435 RRP12Q5JTH9 1297 aaKnown RBP27.46■■□□□ 1.99
SMARCAL1-208ENST00000434435 NBPF12Q5TAG4 269 aaPredicted RBP27.46■■□□□ 1.99
SMARCAL1-208ENST00000434435 USP48Q86UV5 1035 aa27.46■■□□□ 1.99
SMARCAL1-208ENST00000434435 NEK1Q96PY6 1258 aa27.46■■□□□ 1.99
SMARCAL1-208ENST00000434435 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.46■■□□□ 1.99
SMARCAL1-208ENST00000434435 GREB1LQ9C091 1923 aaPredicted RBP27.45■■□□□ 1.99
SMARCAL1-208ENST00000434435 DOCK1Q14185 1865 aa27.45■■□□□ 1.99
SMARCAL1-208ENST00000434435 YY1P25490 414 aa27.45■■□□□ 1.98
SMARCAL1-208ENST00000434435 NT5C2P49902 561 aa27.45■■□□□ 1.98
SMARCAL1-208ENST00000434435 SUPT20HL1Q3ZLR7 823 aa27.45■■□□□ 1.98
SMARCAL1-208ENST00000434435 GLIS2Q9BZE0 524 aaPredicted RBP27.45■■□□□ 1.98
SMARCAL1-208ENST00000434435 TM6SF1Q9BZW5 370 aa27.45■■□□□ 1.98
SMARCAL1-208ENST00000434435 DNAJC18Q9H819 358 aa27.45■■□□□ 1.98
SMARCAL1-208ENST00000434435 INCENPQ9NQS7 918 aa27.45■■□□□ 1.98
SMARCAL1-208ENST00000434435 SSC5DA1L4H1 1573 aa27.44■■□□□ 1.98
SMARCAL1-208ENST00000434435 B4E1Z4 1266 aa27.44■■□□□ 1.98
SMARCAL1-208ENST00000434435 TBC1D12O60347 775 aa27.44■■□□□ 1.98
SMARCAL1-208ENST00000434435 PRDM1O75626 825 aa27.44■■□□□ 1.98
SMARCAL1-208ENST00000434435 CASTP20810 708 aaKnown RBP27.44■■□□□ 1.98
SMARCAL1-208ENST00000434435 PRAMEF18Q5VWM3 479 aa27.44■■□□□ 1.98
SMARCAL1-208ENST00000434435 DCAF15Q66K64 600 aa27.44■■□□□ 1.98
SMARCAL1-208ENST00000434435 MAP1SQ66K74 1059 aaPredicted RBP27.44■■□□□ 1.98
SMARCAL1-208ENST00000434435 ESR2Q92731 530 aa27.44■■□□□ 1.98
SMARCAL1-208ENST00000434435 KIF2CQ99661 725 aa27.44■■□□□ 1.98
SMARCAL1-208ENST00000434435 OTOFQ9HC10 1997 aa27.43■■□□□ 1.98
SMARCAL1-208ENST00000434435 FAM196BA6NMK8 535 aa27.43■■□□□ 1.98
SMARCAL1-208ENST00000434435 HMGB1P09429 215 aaKnown RBP27.43■■□□□ 1.98
SMARCAL1-208ENST00000434435 SHMT1P34896 483 aa27.43■■□□□ 1.98
SMARCAL1-208ENST00000434435 BLOC1S2Q6QNY1 142 aa27.43■■□□□ 1.98
SMARCAL1-208ENST00000434435 CDCA5Q96FF9 252 aa27.43■■□□□ 1.98
SMARCAL1-208ENST00000434435 SLURP2P0DP57 97 aa27.42■■□□□ 1.98
SMARCAL1-208ENST00000434435 RASA1P20936 1047 aa27.42■■□□□ 1.98
SMARCAL1-208ENST00000434435 NF2P35240 595 aa27.42■■□□□ 1.98
SMARCAL1-208ENST00000434435 MAP3K10Q02779 954 aa27.42■■□□□ 1.98
SMARCAL1-208ENST00000434435 ZNF444Q8N0Y2 327 aaPredicted RBP27.42■■□□□ 1.98
SMARCAL1-208ENST00000434435 PAPPA2Q9BXP8 1791 aa27.42■■□□□ 1.98
SMARCAL1-208ENST00000434435 RANBP6O60518 1105 aaKnown RBP27.41■■□□□ 1.98
SMARCAL1-208ENST00000434435 CHADLQ6NUI6 762 aa27.41■■□□□ 1.98
SMARCAL1-208ENST00000434435 TATDN1Q6P1N9 297 aa27.41■■□□□ 1.98
SMARCAL1-208ENST00000434435 MIGA2Q7L4E1 593 aa27.41■■□□□ 1.98
SMARCAL1-208ENST00000434435 MB21D2Q8IYB1 491 aaPredicted RBP27.41■■□□□ 1.98
SMARCAL1-208ENST00000434435 MYH4Q9Y623 1939 aa27.41■■□□□ 1.98
SMARCAL1-208ENST00000434435 KDM4AO75164 1064 aa27.4■■□□□ 1.98
SMARCAL1-208ENST00000434435 RABEP1Q15276 862 aa27.4■■□□□ 1.98
SMARCAL1-208ENST00000434435 ZNF341Q9BYN7 854 aa27.4■■□□□ 1.98
SMARCAL1-208ENST00000434435 ZSWIM6Q9HCJ5 1215 aa27.4■■□□□ 1.98
SMARCAL1-208ENST00000434435 TSPY2A6NKD2 308 aa27.39■■□□□ 1.98
SMARCAL1-208ENST00000434435 KIF3CO14782 793 aa27.39■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms