RNA–Protein interactions for RNA: ENST00000422863.1

HLA-DQA1-204, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-204ENST00000422863 STK31Q9BXU1 1019 aa9.53□□□□□ -0.88
HLA-DQA1-204ENST00000422863 PUS3Q9BZE2 481 aaKnown RBP9.53□□□□□ -0.88
HLA-DQA1-204ENST00000422863 UBE2OQ9C0C9 1292 aaKnown RBP9.53□□□□□ -0.88
HLA-DQA1-204ENST00000422863 TNPO2O14787 897 aaKnown RBP9.52□□□□□ -0.89
HLA-DQA1-204ENST00000422863 FRAT2O75474 233 aaPredicted RBP9.52□□□□□ -0.89
HLA-DQA1-204ENST00000422863 TRIM32Q13049 653 aa9.52□□□□□ -0.89
HLA-DQA1-204ENST00000422863 RALBP1Q15311 655 aa9.52□□□□□ -0.89
HLA-DQA1-204ENST00000422863 DCAF15Q66K64 600 aa9.52□□□□□ -0.89
HLA-DQA1-204ENST00000422863 GADL1Q6ZQY3 521 aa9.52□□□□□ -0.89
HLA-DQA1-204ENST00000422863 TEKT1Q969V4 418 aa9.52□□□□□ -0.89
HLA-DQA1-204ENST00000422863 PARK7Q99497 189 aaKnown RBP9.52□□□□□ -0.89
HLA-DQA1-204ENST00000422863 CRISPLD2Q9H0B8 497 aa9.52□□□□□ -0.89
HLA-DQA1-204ENST00000422863 PAK6Q9NQU5 681 aaPredicted RBP9.52□□□□□ -0.89
HLA-DQA1-204ENST00000422863 TMOD2Q9NZR1 351 aa9.52□□□□□ -0.89
HLA-DQA1-204ENST00000422863 KCNH4Q9UQ05 1017 aa9.52□□□□□ -0.89
HLA-DQA1-204ENST00000422863 ATAD5Q96QE3 1844 aa9.52□□□□□ -0.89
HLA-DQA1-204ENST00000422863 SLURP2P0DP57 97 aa9.51□□□□□ -0.89
HLA-DQA1-204ENST00000422863 MDM2Q00987 491 aaPredicted RBP9.51□□□□□ -0.89
HLA-DQA1-204ENST00000422863 FKBP5Q13451 457 aaPredicted RBP9.51□□□□□ -0.89
HLA-DQA1-204ENST00000422863 UBE4AQ14139 1066 aa9.51□□□□□ -0.89
HLA-DQA1-204ENST00000422863 CCDC57Q2TAC2 916 aa9.51□□□□□ -0.89
HLA-DQA1-204ENST00000422863 APOBEC3HQ6NTF7 200 aaKnown RBP9.51□□□□□ -0.89
HLA-DQA1-204ENST00000422863 FAM83AQ86UY5 434 aa9.51□□□□□ -0.89
HLA-DQA1-204ENST00000422863 VPS37DQ86XT2 251 aa9.51□□□□□ -0.89
HLA-DQA1-204ENST00000422863 MRPL50Q8N5N7 158 aaKnown RBP9.51□□□□□ -0.89
HLA-DQA1-204ENST00000422863 PXYLP1Q8TE99 480 aa9.51□□□□□ -0.89
HLA-DQA1-204ENST00000422863 DNAAF4Q8WXU2 420 aa9.51□□□□□ -0.89
HLA-DQA1-204ENST00000422863 GUCD1Q96NT3 240 aa9.51□□□□□ -0.89
HLA-DQA1-204ENST00000422863 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.51□□□□□ -0.89
HLA-DQA1-204ENST00000422863 MYH16Q9H6N6 1097 aa9.51□□□□□ -0.89
HLA-DQA1-204ENST00000422863 DOCK1Q14185 1865 aa9.51□□□□□ -0.89
HLA-DQA1-204ENST00000422863 FRMPD3Q5JV73 1810 aa9.5□□□□□ -0.89
HLA-DQA1-204ENST00000422863 F6X3S4 739 aa9.5□□□□□ -0.89
HLA-DQA1-204ENST00000422863 FLIIQ13045 1269 aa9.5□□□□□ -0.89
HLA-DQA1-204ENST00000422863 FBXO33Q7Z6M2 555 aa9.5□□□□□ -0.89
HLA-DQA1-204ENST00000422863 ZFPM1Q8IX07 1006 aa9.5□□□□□ -0.89
HLA-DQA1-204ENST00000422863 HOOK2Q96ED9 719 aa9.5□□□□□ -0.89
HLA-DQA1-204ENST00000422863 ZDHHC15Q96MV8 337 aa9.5□□□□□ -0.89
HLA-DQA1-204ENST00000422863 C11orf49Q9H6J7 331 aa9.5□□□□□ -0.89
HLA-DQA1-204ENST00000422863 PRDM6Q9NQX0 595 aa9.5□□□□□ -0.89
HLA-DQA1-204ENST00000422863 RAPGEFL1Q9UHV5 662 aa9.5□□□□□ -0.89
HLA-DQA1-204ENST00000422863 ZNF112Q9UJU3 913 aa9.5□□□□□ -0.89
HLA-DQA1-204ENST00000422863 RPTORQ8N122 1335 aa9.5□□□□□ -0.89
HLA-DQA1-204ENST00000422863 CDH23Q9H251 3354 aa9.5□□□□□ -0.89
HLA-DQA1-204ENST00000422863 MYO9BQ13459 2157 aa9.49□□□□□ -0.89
HLA-DQA1-204ENST00000422863 GFRA3O60609 400 aa9.49□□□□□ -0.89
HLA-DQA1-204ENST00000422863 HDLBPQ00341 1268 aaKnown RBP9.49□□□□□ -0.89
HLA-DQA1-204ENST00000422863 CCDC84Q86UT8 332 aaPredicted RBP9.49□□□□□ -0.89
HLA-DQA1-204ENST00000422863 ANKRD13CQ8N6S4 541 aa9.49□□□□□ -0.89
HLA-DQA1-204ENST00000422863 LINS1Q8NG48 757 aa9.49□□□□□ -0.89
HLA-DQA1-204ENST00000422863 FAM151AQ8WW52 585 aa9.49□□□□□ -0.89
HLA-DQA1-204ENST00000422863 NBPF3Q9H094 633 aa9.49□□□□□ -0.89
HLA-DQA1-204ENST00000422863 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.49□□□□□ -0.89
HLA-DQA1-204ENST00000422863 ZHX2Q9Y6X8 837 aa9.49□□□□□ -0.89
HLA-DQA1-204ENST00000422863 CXCL11O14625 94 aa9.48□□□□□ -0.89
HLA-DQA1-204ENST00000422863 CALD1Q05682 793 aaKnown RBP9.48□□□□□ -0.89
HLA-DQA1-204ENST00000422863 NFIAQ12857 509 aa9.48□□□□□ -0.89
HLA-DQA1-204ENST00000422863 IRF5Q13568 498 aa9.48□□□□□ -0.89
HLA-DQA1-204ENST00000422863 TWISTNBQ3B726 338 aaPredicted RBP9.48□□□□□ -0.89
HLA-DQA1-204ENST00000422863 FKBP1CQ5VVH2 108 aa9.48□□□□□ -0.89
HLA-DQA1-204ENST00000422863 SMCR8Q8TEV9 937 aaPredicted RBP9.48□□□□□ -0.89
HLA-DQA1-204ENST00000422863 COA7Q96BR5 231 aa9.48□□□□□ -0.89
HLA-DQA1-204ENST00000422863 CHMP4AQ9BY43 222 aa9.48□□□□□ -0.89
HLA-DQA1-204ENST00000422863 HMX1Q9NP08 348 aaPredicted RBP9.48□□□□□ -0.89
HLA-DQA1-204ENST00000422863 MYBBP1AQ9BQG0 1328 aaKnown RBP9.48□□□□□ -0.89
HLA-DQA1-204ENST00000422863 A0A0G2JLL6 359 aaPredicted RBP9.47□□□□□ -0.89
HLA-DQA1-204ENST00000422863 LRRC24Q50LG9 513 aa9.47□□□□□ -0.89
HLA-DQA1-204ENST00000422863 NOL9Q5SY16 702 aaKnown RBP9.47□□□□□ -0.89
HLA-DQA1-204ENST00000422863 CDC42EP5Q6NZY7 148 aa9.47□□□□□ -0.89
HLA-DQA1-204ENST00000422863 FASTKD5Q7L8L6 764 aaKnown RBP9.47□□□□□ -0.89
HLA-DQA1-204ENST00000422863 PRRT2Q7Z6L0 340 aaPredicted RBP9.47□□□□□ -0.89
HLA-DQA1-204ENST00000422863 ANKLE1Q8NAG6 615 aa9.47□□□□□ -0.89
HLA-DQA1-204ENST00000422863 TBC1D22AQ8WUA7 517 aa9.47□□□□□ -0.89
HLA-DQA1-204ENST00000422863 ZBED2Q9BTP6 218 aa9.47□□□□□ -0.89
HLA-DQA1-204ENST00000422863 AFG3L2Q9Y4W6 797 aa9.47□□□□□ -0.89
HLA-DQA1-204ENST00000422863 CDK5RAP2Q96SN8 1893 aa9.47□□□□□ -0.89
HLA-DQA1-204ENST00000422863 TRIM75PA6NK02 468 aa9.46□□□□□ -0.9
HLA-DQA1-204ENST00000422863 TBC1D12O60347 775 aa9.46□□□□□ -0.9
HLA-DQA1-204ENST00000422863 PTPRAP18433 802 aa9.46□□□□□ -0.9
HLA-DQA1-204ENST00000422863 COL9A1P20849 921 aa9.46□□□□□ -0.9
HLA-DQA1-204ENST00000422863 DIXDC1Q155Q3 683 aa9.46□□□□□ -0.9
HLA-DQA1-204ENST00000422863 CAVIN4Q5BKX8 364 aa9.46□□□□□ -0.9
HLA-DQA1-204ENST00000422863 TREML2Q5T2D2 321 aa9.46□□□□□ -0.9
HLA-DQA1-204ENST00000422863 BEND3Q5T5X7 828 aa9.46□□□□□ -0.9
HLA-DQA1-204ENST00000422863 HHIPL2Q6UWX4 724 aa9.46□□□□□ -0.9
HLA-DQA1-204ENST00000422863 MRIQ9BWK5 157 aa9.46□□□□□ -0.9
HLA-DQA1-204ENST00000422863 PICK1Q9NRD5 415 aa9.46□□□□□ -0.9
HLA-DQA1-204ENST00000422863 USP40Q9NVE5 1235 aa9.46□□□□□ -0.9
HLA-DQA1-204ENST00000422863 FAM198AQ9UFP1 575 aa9.46□□□□□ -0.9
HLA-DQA1-204ENST00000422863 STK24Q9Y6E0 443 aa9.46□□□□□ -0.9
HLA-DQA1-204ENST00000422863 PFASO15067 1338 aa9.46□□□□□ -0.9
HLA-DQA1-204ENST00000422863 TCF20Q9UGU0 1960 aaKnown RBP9.46□□□□□ -0.9
HLA-DQA1-204ENST00000422863 MUC3AQ02505 3323 aa9.46□□□□□ -0.9
HLA-DQA1-204ENST00000422863 TTC28Q96AY4 2481 aa9.45□□□□□ -0.9
HLA-DQA1-204ENST00000422863 PHF20L1A8MW92 1017 aa9.45□□□□□ -0.9
HLA-DQA1-204ENST00000422863 PEX10O60683 326 aa9.45□□□□□ -0.9
HLA-DQA1-204ENST00000422863 HMGCRP04035 888 aa9.45□□□□□ -0.9
HLA-DQA1-204ENST00000422863 CAPN2P17655 700 aa9.45□□□□□ -0.9
HLA-DQA1-204ENST00000422863 CYP2B6P20813 491 aa9.45□□□□□ -0.9
HLA-DQA1-204ENST00000422863 DDX10Q13206 875 aaKnown RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms