RNA–Protein interactions for RNA: ENST00000420451.5

HDLBP-207, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-207ENST00000420451 LDHCP07864 332 aa13.14□□□□□ -0.31
HDLBP-207ENST00000420451 CCL5P13501 91 aa13.14□□□□□ -0.31
HDLBP-207ENST00000420451 GSTO1P78417 241 aa13.14□□□□□ -0.31
HDLBP-207ENST00000420451 IRF5Q13568 498 aa13.14□□□□□ -0.31
HDLBP-207ENST00000420451 RRP1BQ14684 758 aaKnown RBP13.14□□□□□ -0.31
HDLBP-207ENST00000420451 GADL1Q6ZQY3 521 aa13.14□□□□□ -0.31
HDLBP-207ENST00000420451 PROCA1Q8NCQ7 364 aaPredicted RBP13.14□□□□□ -0.31
HDLBP-207ENST00000420451 SLAIN1Q8ND83 568 aa13.14□□□□□ -0.31
HDLBP-207ENST00000420451 NKX2-3Q8TAU0 364 aa13.14□□□□□ -0.31
HDLBP-207ENST00000420451 GPR108Q9NPR9 543 aa13.14□□□□□ -0.31
HDLBP-207ENST00000420451 COLQQ9Y215 455 aaPredicted RBP13.14□□□□□ -0.31
HDLBP-207ENST00000420451 TRIM75PA6NK02 468 aa13.13□□□□□ -0.31
HDLBP-207ENST00000420451 FAM196BA6NMK8 535 aa13.13□□□□□ -0.31
HDLBP-207ENST00000420451 RRP1P56182 461 aaKnown RBP13.13□□□□□ -0.31
HDLBP-207ENST00000420451 POLA2Q14181 598 aa13.13□□□□□ -0.31
HDLBP-207ENST00000420451 TREML2Q5T2D2 321 aa13.13□□□□□ -0.31
HDLBP-207ENST00000420451 ITPRIPQ8IWB1 547 aa13.13□□□□□ -0.31
HDLBP-207ENST00000420451 PXYLP1Q8TE99 480 aa13.13□□□□□ -0.31
HDLBP-207ENST00000420451 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.13□□□□□ -0.312e-8■□□□□ 11.1
HDLBP-207ENST00000420451 COG6Q9Y2V7 657 aa13.13□□□□□ -0.31
HDLBP-207ENST00000420451 ALPK3Q96L96 1907 aa13.13□□□□□ -0.31
HDLBP-207ENST00000420451 RANBP2P49792 3224 aaKnown RBP13.12□□□□□ -0.31
HDLBP-207ENST00000420451 H0YGN5 161 aa13.12□□□□□ -0.31
HDLBP-207ENST00000420451 UQCRFS1P1P0C7P4 283 aa13.12□□□□□ -0.31
HDLBP-207ENST00000420451 CAP2P40123 477 aa13.12□□□□□ -0.31
HDLBP-207ENST00000420451 FLT3LGP49771 235 aa13.12□□□□□ -0.31
HDLBP-207ENST00000420451 UBXN2AP68543 259 aa13.12□□□□□ -0.31
HDLBP-207ENST00000420451 G3BP1Q13283 466 aaKnown RBP eCLIP13.12□□□□□ -0.31
HDLBP-207ENST00000420451 FAM110CQ1W6H9 321 aa13.12□□□□□ -0.31
HDLBP-207ENST00000420451 SH3D19Q5HYK7 790 aa13.12□□□□□ -0.31
HDLBP-207ENST00000420451 SSH3Q8TE77 659 aa13.12□□□□□ -0.31
HDLBP-207ENST00000420451 TBC1D2Q9BYX2 928 aa13.12□□□□□ -0.31
HDLBP-207ENST00000420451 RNF208Q9H0X6 261 aa13.12□□□□□ -0.31
HDLBP-207ENST00000420451 ADCY3O60266 1144 aa13.11□□□□□ -0.31
HDLBP-207ENST00000420451 IGSF3O75054 1194 aa13.11□□□□□ -0.31
HDLBP-207ENST00000420451 PPP4CP60510 307 aa13.11□□□□□ -0.31
HDLBP-207ENST00000420451 TNNI3KQ59H18 835 aa13.11□□□□□ -0.31
HDLBP-207ENST00000420451 METTL16Q86W50 562 aaKnown RBP13.11□□□□□ -0.31
HDLBP-207ENST00000420451 ZNF280CQ8ND82 737 aa13.11□□□□□ -0.31
HDLBP-207ENST00000420451 SH3RF3Q8TEJ3 882 aaPredicted RBP13.11□□□□□ -0.31
HDLBP-207ENST00000420451 U2AF1L4Q8WU68 220 aaKnown RBP13.11□□□□□ -0.31
HDLBP-207ENST00000420451 ZNF512BQ96KM6 892 aaPredicted RBP13.11□□□□□ -0.31
HDLBP-207ENST00000420451 UNC93B1Q9H1C4 597 aa13.11□□□□□ -0.31
HDLBP-207ENST00000420451 RAI14Q9P0K7 980 aa13.11□□□□□ -0.31
HDLBP-207ENST00000420451 HERC5Q9UII4 1024 aaKnown RBP13.11□□□□□ -0.31
HDLBP-207ENST00000420451 SUPT16HQ9Y5B9 1047 aaKnown RBP13.11□□□□□ -0.31
HDLBP-207ENST00000420451 FPGT-TNNI3KV9GXZ4 949 aa13.11□□□□□ -0.31
HDLBP-207ENST00000420451 MYH1P12882 1939 aa13.1□□□□□ -0.31
HDLBP-207ENST00000420451 TNPO2O14787 897 aaKnown RBP13.1□□□□□ -0.31
HDLBP-207ENST00000420451 ZBTB7BO15156 539 aaPredicted RBP13.1□□□□□ -0.31
HDLBP-207ENST00000420451 SGPL1O95470 568 aa13.1□□□□□ -0.31
HDLBP-207ENST00000420451 CYP2E1P05181 493 aaPredicted RBP13.1□□□□□ -0.31
HDLBP-207ENST00000420451 SPP2Q13103 211 aa13.1□□□□□ -0.31
HDLBP-207ENST00000420451 GORABQ5T7V8 394 aa13.1□□□□□ -0.31
HDLBP-207ENST00000420451 ADGRA1Q86SQ6 560 aa13.1□□□□□ -0.31
HDLBP-207ENST00000420451 TEX11Q8IYF3 940 aa13.1□□□□□ -0.31
HDLBP-207ENST00000420451 ANKRD13CQ8N6S4 541 aa13.1□□□□□ -0.31
HDLBP-207ENST00000420451 SMCR8Q8TEV9 937 aaPredicted RBP13.1□□□□□ -0.31
HDLBP-207ENST00000420451 DBNDD2Q9BQY9 259 aa13.1□□□□□ -0.31
HDLBP-207ENST00000420451 PRO3102Q9H379 93 aa13.1□□□□□ -0.31
HDLBP-207ENST00000420451 C1orf115Q9H7X2 142 aa13.1□□□□□ -0.31
HDLBP-207ENST00000420451 DNAJC18Q9H819 358 aa13.1□□□□□ -0.31
HDLBP-207ENST00000420451 PNMA3Q9UL41 463 aa13.1□□□□□ -0.31
HDLBP-207ENST00000420451 CEP290O15078 2479 aa13.1□□□□□ -0.31
HDLBP-207ENST00000420451 USP17L5A8MUK1 530 aa13.09□□□□□ -0.31
HDLBP-207ENST00000420451 INHAP05111 366 aa13.09□□□□□ -0.31
HDLBP-207ENST00000420451 ELNP15502 786 aa13.09□□□□□ -0.31
HDLBP-207ENST00000420451 CAPN2P17655 700 aa13.09□□□□□ -0.31
HDLBP-207ENST00000420451 JAG1P78504 1218 aa13.09□□□□□ -0.31
HDLBP-207ENST00000420451 ATP8B2P98198 1209 aa13.09□□□□□ -0.31
HDLBP-207ENST00000420451 PDE3AQ14432 1141 aa13.09□□□□□ -0.31
HDLBP-207ENST00000420451 WDR18Q9BV38 432 aa13.09□□□□□ -0.31
HDLBP-207ENST00000420451 CRISPLD2Q9H0B8 497 aa13.09□□□□□ -0.31
HDLBP-207ENST00000420451 DHX36Q9H2U1 1008 aaKnown RBP13.09□□□□□ -0.31
HDLBP-207ENST00000420451 PAK6Q9NQU5 681 aaPredicted RBP13.09□□□□□ -0.31
HDLBP-207ENST00000420451 AATFQ9NY61 560 aaKnown RBP eCLIP13.09□□□□□ -0.31
HDLBP-207ENST00000420451 LRP2BPQ9P2M1 347 aa13.09□□□□□ -0.31
HDLBP-207ENST00000420451 PI4KBQ9UBF8 816 aa13.09□□□□□ -0.31
HDLBP-207ENST00000420451 NOP58Q9Y2X3 529 aaKnown RBP13.09□□□□□ -0.31
HDLBP-207ENST00000420451 DDX60LQ5H9U9 1706 aaKnown RBP13.08□□□□□ -0.32
HDLBP-207ENST00000420451 MS4A1P11836 297 aa13.08□□□□□ -0.32
HDLBP-207ENST00000420451 GCLCP48506 637 aaPredicted RBP13.08□□□□□ -0.32
HDLBP-207ENST00000420451 HMGCS2P54868 508 aa13.08□□□□□ -0.32
HDLBP-207ENST00000420451 NAA16Q6N069 864 aaPredicted RBP13.08□□□□□ -0.32
HDLBP-207ENST00000420451 HTATIP2Q9BUP3 242 aa13.08□□□□□ -0.32
HDLBP-207ENST00000420451 ASCC2Q9H1I8 757 aaPredicted RBP13.08□□□□□ -0.32
HDLBP-207ENST00000420451 SNRKQ9NRH2 765 aa13.08□□□□□ -0.32
HDLBP-207ENST00000420451 MORF4L1Q9UBU8 362 aa13.08□□□□□ -0.32
HDLBP-207ENST00000420451 BIN2Q9UBW5 565 aaPredicted RBP13.08□□□□□ -0.32
HDLBP-207ENST00000420451 GJD2Q9UKL4 321 aa13.08□□□□□ -0.32
HDLBP-207ENST00000420451 FLT1P17948 1338 aa13.08□□□□□ -0.32
HDLBP-207ENST00000420451 FARP2O94887 1054 aaPredicted RBP13.07□□□□□ -0.32
HDLBP-207ENST00000420451 BAG3O95817 575 aa13.07□□□□□ -0.32
HDLBP-207ENST00000420451 PLCG2P16885 1265 aa13.07□□□□□ -0.32
HDLBP-207ENST00000420451 HOXA7P31268 230 aaPredicted RBP13.07□□□□□ -0.32
HDLBP-207ENST00000420451 ZAP70P43403 619 aa13.07□□□□□ -0.32
HDLBP-207ENST00000420451 PABPC4Q13310 644 aaKnown RBP eCLIP13.07□□□□□ -0.32
HDLBP-207ENST00000420451 CCDC158Q5M9N0 1113 aa13.07□□□□□ -0.32
HDLBP-207ENST00000420451 TTC39AQ5SRH9 613 aa13.07□□□□□ -0.32
HDLBP-207ENST00000420451 CHRDL2Q6WN34 429 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms