RNA–Protein interactions for RNA: ENST00000417717.6

SATB1-204, Transcript of SATB homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene SATB1, Length 4,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-204ENST00000417717 LRMPQ12912 555 aa11.43□□□□□ -0.58
SATB1-204ENST00000417717 TEX9Q8N6V9 391 aa11.43□□□□□ -0.58
SATB1-204ENST00000417717 NRBF2Q96F24 287 aa11.43□□□□□ -0.58
SATB1-204ENST00000417717 GDAP1L1Q96MZ0 367 aa11.43□□□□□ -0.58
SATB1-204ENST00000417717 SH3GL2Q99962 352 aa11.43□□□□□ -0.58
SATB1-204ENST00000417717 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.43□□□□□ -0.58
SATB1-204ENST00000417717 TRHP20396 242 aaPredicted RBP11.43□□□□□ -0.58
SATB1-204ENST00000417717 HS2ST1Q7LGA3 356 aa11.43□□□□□ -0.58
SATB1-204ENST00000417717 CCDC51Q96ER9 411 aa11.43□□□□□ -0.58
SATB1-204ENST00000417717 MYO5CQ9NQX4 1742 aa11.43□□□□□ -0.58
SATB1-204ENST00000417717 UHRF1BP1Q6BDS2 1440 aa11.43□□□□□ -0.58
SATB1-204ENST00000417717 GPRASP1Q5JY77 1395 aa11.42□□□□□ -0.58
SATB1-204ENST00000417717 CFAP73A6NFT4 308 aa11.42□□□□□ -0.58
SATB1-204ENST00000417717 TMCC1O94876 653 aa11.42□□□□□ -0.58
SATB1-204ENST00000417717 CYLC2Q14093 348 aaPredicted RBP11.42□□□□□ -0.58
SATB1-204ENST00000417717 C1orf141Q5JVX7 400 aa11.42□□□□□ -0.58
SATB1-204ENST00000417717 VPS37DQ86XT2 251 aa11.42□□□□□ -0.58
SATB1-204ENST00000417717 CASP10Q92851 521 aa11.42□□□□□ -0.58
SATB1-204ENST00000417717 ZBTB10Q96DT7 871 aa11.42□□□□□ -0.58
SATB1-204ENST00000417717 RBM42Q9BTD8 480 aaKnown RBP11.42□□□□□ -0.58
SATB1-204ENST00000417717 CNOT10Q9H9A5 744 aaKnown RBP11.42□□□□□ -0.58
SATB1-204ENST00000417717 TRAPPC8Q9Y2L5 1435 aa11.42□□□□□ -0.58
SATB1-204ENST00000417717 A2MP01023 1474 aa11.42□□□□□ -0.58
SATB1-204ENST00000417717 PREX2Q70Z35 1606 aa11.42□□□□□ -0.58
SATB1-204ENST00000417717 MRPS35P82673 323 aaKnown RBP11.42□□□□□ -0.58
SATB1-204ENST00000417717 ANKRD20A4Q4UJ75 823 aa11.42□□□□□ -0.58
SATB1-204ENST00000417717 ANKRD20A8PQ5CZ79 823 aa11.42□□□□□ -0.58
SATB1-204ENST00000417717 ANKRD20A2Q5SQ80 823 aa11.42□□□□□ -0.58
SATB1-204ENST00000417717 ANKRD20A1Q5TYW2 823 aa11.42□□□□□ -0.58
SATB1-204ENST00000417717 ZNF483Q8TF39 744 aaPredicted RBP11.42□□□□□ -0.58
SATB1-204ENST00000417717 LRRC27Q9C0I9 530 aa11.42□□□□□ -0.58
SATB1-204ENST00000417717 TUBA8Q9NY65 449 aaPredicted RBP11.42□□□□□ -0.58
SATB1-204ENST00000417717 ORC3Q9UBD5 711 aaPredicted RBP11.42□□□□□ -0.58
SATB1-204ENST00000417717 ABCF2Q9UG63 623 aa11.42□□□□□ -0.58
SATB1-204ENST00000417717 PARP2Q9UGN5 583 aa11.42□□□□□ -0.58
SATB1-204ENST00000417717 FRMD4BQ9Y2L6 1034 aa11.42□□□□□ -0.58
SATB1-204ENST00000417717 CTDP1Q9Y5B0 961 aaPredicted RBP11.42□□□□□ -0.58
SATB1-204ENST00000417717 SPTLC2O15270 562 aa11.42□□□□□ -0.58
SATB1-204ENST00000417717 ZRANB2O95218 330 aaKnown RBP eCLIP11.42□□□□□ -0.58
SATB1-204ENST00000417717 UBXN1Q04323 297 aa11.42□□□□□ -0.58
SATB1-204ENST00000417717 PPP2R5EQ16537 467 aa11.42□□□□□ -0.58
SATB1-204ENST00000417717 ZC3H18Q86VM9 953 aaKnown RBP11.42□□□□□ -0.58
SATB1-204ENST00000417717 HIC2Q96JB3 615 aa11.42□□□□□ -0.58
SATB1-204ENST00000417717 OSBPL1AQ9BXW6 950 aa11.42□□□□□ -0.58
SATB1-204ENST00000417717 CFAP74Q9C0B2 1584 aa11.42□□□□□ -0.58
SATB1-204ENST00000417717 C10orf88Q9H8K7 445 aa11.42□□□□□ -0.58
SATB1-204ENST00000417717 IL1RAPL2Q9NP60 686 aa11.42□□□□□ -0.58
SATB1-204ENST00000417717 NEO1Q92859 1461 aa11.42□□□□□ -0.58
SATB1-204ENST00000417717 DKC1O60832 514 aaKnown RBP eCLIP11.42□□□□□ -0.58
SATB1-204ENST00000417717 TRIM60Q495X7 471 aa11.42□□□□□ -0.58
SATB1-204ENST00000417717 AACSQ86V21 672 aa11.42□□□□□ -0.58
SATB1-204ENST00000417717 TRIML2Q8N7C3 387 aa11.42□□□□□ -0.58
SATB1-204ENST00000417717 MSANTD4Q8NCY6 345 aa11.42□□□□□ -0.58
SATB1-204ENST00000417717 NOX5Q96PH1 765 aa11.42□□□□□ -0.58
SATB1-204ENST00000417717 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.42□□□□□ -0.58
SATB1-204ENST00000417717 SEPT10Q9P0V9 454 aa11.42□□□□□ -0.58
SATB1-204ENST00000417717 CASP8Q14790 479 aa11.41□□□□□ -0.58
SATB1-204ENST00000417717 ATP6V0A1Q93050 837 aa11.41□□□□□ -0.58
SATB1-204ENST00000417717 RAB17Q9H0T7 212 aa11.41□□□□□ -0.58
SATB1-204ENST00000417717 EXOC1Q9NV70 894 aa11.41□□□□□ -0.58
SATB1-204ENST00000417717 INTUQ9ULD6 942 aa11.41□□□□□ -0.58
SATB1-204ENST00000417717 TRAK1Q9UPV9 953 aa11.41□□□□□ -0.58
SATB1-204ENST00000417717 MRPS15P82914 257 aaKnown RBP11.41□□□□□ -0.58
SATB1-204ENST00000417717 USP33Q8TEY7 942 aa11.41□□□□□ -0.58
SATB1-204ENST00000417717 TBC1D5Q92609 795 aa11.41□□□□□ -0.58
SATB1-204ENST00000417717 HOOK2Q96ED9 719 aa11.41□□□□□ -0.58
SATB1-204ENST00000417717 FAM167BQ9BTA0 163 aa11.41□□□□□ -0.58
SATB1-204ENST00000417717 HELLSQ9NRZ9 838 aa11.41□□□□□ -0.58
SATB1-204ENST00000417717 INTS9Q9NV88 658 aaKnown RBP11.41□□□□□ -0.58
SATB1-204ENST00000417717 GAS8O95995 478 aa11.41□□□□□ -0.58
SATB1-204ENST00000417717 EPHB4P54760 987 aa11.41□□□□□ -0.58
SATB1-204ENST00000417717 ALS2CLQ60I27 953 aa11.41□□□□□ -0.58
SATB1-204ENST00000417717 B4GALNT2Q8NHY0 566 aa11.41□□□□□ -0.58
SATB1-204ENST00000417717 PARD6BQ9BYG5 372 aa11.41□□□□□ -0.58
SATB1-204ENST00000417717 EXOC6BQ9Y2D4 811 aa11.41□□□□□ -0.58
SATB1-204ENST00000417717 ERBB4Q15303 1308 aa11.41□□□□□ -0.58
SATB1-204ENST00000417717 GOLGA8AA7E2F4 631 aa11.4□□□□□ -0.58
SATB1-204ENST00000417717 GOLGA8BA8MQT2 603 aa11.4□□□□□ -0.58
SATB1-204ENST00000417717 SYF2O95926 243 aaKnown RBP11.4□□□□□ -0.58
SATB1-204ENST00000417717 SLC4A2P04920 1241 aa11.4□□□□□ -0.58
SATB1-204ENST00000417717 POLR3DP05423 398 aaPredicted RBP11.4□□□□□ -0.58
SATB1-204ENST00000417717 UBA7P41226 1012 aa11.4□□□□□ -0.58
SATB1-204ENST00000417717 GSTA5Q7RTV2 222 aa11.4□□□□□ -0.58
SATB1-204ENST00000417717 RIC3Q7Z5B4 369 aa11.4□□□□□ -0.58
SATB1-204ENST00000417717 TBC1D1Q86TI0 1168 aaPredicted RBP11.4□□□□□ -0.58
SATB1-204ENST00000417717 SCYL3Q8IZE3 742 aa11.4□□□□□ -0.58
SATB1-204ENST00000417717 DACT3Q96B18 629 aaPredicted RBP11.4□□□□□ -0.58
SATB1-204ENST00000417717 CSRNP2Q9H175 543 aa11.4□□□□□ -0.58
SATB1-204ENST00000417717 MMRN2Q9H8L6 949 aa11.4□□□□□ -0.58
SATB1-204ENST00000417717 BSDC1Q9NW68 430 aaPredicted RBP11.4□□□□□ -0.58
SATB1-204ENST00000417717 KLC1Q07866 573 aa11.4□□□□□ -0.58
SATB1-204ENST00000417717 TNIP1Q15025 636 aa11.4□□□□□ -0.58
SATB1-204ENST00000417717 CCDC93Q567U6 631 aa11.4□□□□□ -0.58
SATB1-204ENST00000417717 MYSM1Q5VVJ2 828 aa11.4□□□□□ -0.58
SATB1-204ENST00000417717 PLEKHA4Q9H4M7 779 aa11.4□□□□□ -0.58
SATB1-204ENST00000417717 TCP11L1Q9NUJ3 509 aa11.4□□□□□ -0.58
SATB1-204ENST00000417717 PSD3Q9NYI0 1048 aa11.4□□□□□ -0.58
SATB1-204ENST00000417717 PPP2R2CQ9Y2T4 447 aa11.4□□□□□ -0.58
SATB1-204ENST00000417717 TCP1P17987 556 aaKnown RBP11.4□□□□□ -0.58
SATB1-204ENST00000417717 YY1P25490 414 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms