RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 TBC1D10BQ4KMP7 808 aaPredicted RBP7.3□□□□□ -1.24
ECHDC1-206ENST00000417628 NBPF5PQ86XG9 351 aaPredicted RBP7.3□□□□□ -1.24
ECHDC1-206ENST00000417628 SH3TC2Q8TF17 1288 aa7.3□□□□□ -1.24
ECHDC1-206ENST00000417628 CDX2Q99626 313 aaPredicted RBP7.3□□□□□ -1.24
ECHDC1-206ENST00000417628 MKNK1Q9BUB5 465 aa7.3□□□□□ -1.24
ECHDC1-206ENST00000417628 VPS33BQ9H267 617 aa7.3□□□□□ -1.24
ECHDC1-206ENST00000417628 EGFL7Q9UHF1 273 aa7.3□□□□□ -1.24
ECHDC1-206ENST00000417628 FANCIQ9NVI1 1328 aa7.29□□□□□ -1.24
ECHDC1-206ENST00000417628 LOC105371045A0A1W2PR82 267 aa7.29□□□□□ -1.24
ECHDC1-206ENST00000417628 ICMTO60725 284 aa7.29□□□□□ -1.24
ECHDC1-206ENST00000417628 RAD17O75943 681 aa7.29□□□□□ -1.24
ECHDC1-206ENST00000417628 ABL1P00519 1130 aa7.29□□□□□ -1.24
ECHDC1-206ENST00000417628 IGFBP4P22692 258 aa7.29□□□□□ -1.24
ECHDC1-206ENST00000417628 GJA8P48165 433 aa7.29□□□□□ -1.24
ECHDC1-206ENST00000417628 RBM25P49756 843 aaKnown RBP7.29□□□□□ -1.24
ECHDC1-206ENST00000417628 SP3Q02447 781 aa7.29□□□□□ -1.24
ECHDC1-206ENST00000417628 ZNF211Q13398 564 aaPredicted RBP7.29□□□□□ -1.24
ECHDC1-206ENST00000417628 TCIRG1Q13488 830 aa7.29□□□□□ -1.24
ECHDC1-206ENST00000417628 ECM1Q16610 540 aa7.29□□□□□ -1.24
ECHDC1-206ENST00000417628 MOB2Q70IA6 237 aa7.29□□□□□ -1.24
ECHDC1-206ENST00000417628 GTF3C2Q8WUA4 911 aaPredicted RBP7.29□□□□□ -1.24
ECHDC1-206ENST00000417628 ANO2Q9NQ90 1003 aa7.29□□□□□ -1.24
ECHDC1-206ENST00000417628 PLA2G2EQ9NZK7 142 aa7.29□□□□□ -1.24
ECHDC1-206ENST00000417628 SERTAD1Q9UHV2 236 aa7.29□□□□□ -1.24
ECHDC1-206ENST00000417628 TTC28Q96AY4 2481 aa7.29□□□□□ -1.24
ECHDC1-206ENST00000417628 UBE2Q2LH0YL09 131 aa7.28□□□□□ -1.24
ECHDC1-206ENST00000417628 BACH1O14867 736 aa7.28□□□□□ -1.24
ECHDC1-206ENST00000417628 EGFRP00533 1210 aa7.28□□□□□ -1.24
ECHDC1-206ENST00000417628 EIF5P55010 431 aaKnown RBP7.28□□□□□ -1.24
ECHDC1-206ENST00000417628 CAP1Q01518 475 aa7.28□□□□□ -1.24
ECHDC1-206ENST00000417628 TAF7LQ5H9L4 462 aa7.28□□□□□ -1.24
ECHDC1-206ENST00000417628 SPRYD7Q5W111 196 aa7.28□□□□□ -1.24
ECHDC1-206ENST00000417628 CYP2U1Q7Z449 544 aa7.28□□□□□ -1.24
ECHDC1-206ENST00000417628 SCG3Q8WXD2 468 aaKnown RBP7.28□□□□□ -1.24
ECHDC1-206ENST00000417628 UBE2OQ9C0C9 1292 aaKnown RBP7.28□□□□□ -1.24
ECHDC1-206ENST00000417628 SLC12A5Q9H2X9 1139 aa7.28□□□□□ -1.24
ECHDC1-206ENST00000417628 DNMT3AQ9Y6K1 912 aaPredicted RBP7.28□□□□□ -1.24
ECHDC1-206ENST00000417628 RAB3GAP2Q9H2M9 1393 aa7.28□□□□□ -1.24
ECHDC1-206ENST00000417628 ZNF646O15015 1829 aaPredicted RBP7.27□□□□□ -1.25
ECHDC1-206ENST00000417628 PRAMEF22A3QJZ6 481 aa7.27□□□□□ -1.25
ECHDC1-206ENST00000417628 MANSC4A6NHS7 340 aaPredicted RBP7.27□□□□□ -1.25
ECHDC1-206ENST00000417628 GNRH1P01148 92 aa7.27□□□□□ -1.25
ECHDC1-206ENST00000417628 FOSL2P15408 326 aa7.27□□□□□ -1.25
ECHDC1-206ENST00000417628 MAGEA10P43363 369 aaPredicted RBP7.27□□□□□ -1.25
ECHDC1-206ENST00000417628 INHBEP58166 350 aa7.27□□□□□ -1.25
ECHDC1-206ENST00000417628 CRHR2Q13324 411 aa7.27□□□□□ -1.25
ECHDC1-206ENST00000417628 KIF4BQ2VIQ3 1234 aa7.27□□□□□ -1.25
ECHDC1-206ENST00000417628 DIEXFQ68CQ4 756 aaKnown RBP7.27□□□□□ -1.25
ECHDC1-206ENST00000417628 DPF2Q92785 391 aa7.27□□□□□ -1.25
ECHDC1-206ENST00000417628 COL26A1Q96A83 441 aa7.27□□□□□ -1.25
ECHDC1-206ENST00000417628 UHRF1Q96T88 793 aaPredicted RBP7.27□□□□□ -1.25
ECHDC1-206ENST00000417628 LRFN3Q9BTN0 628 aa7.27□□□□□ -1.25
ECHDC1-206ENST00000417628 TSPAN10Q9H1Z9 355 aaPredicted RBP7.27□□□□□ -1.25
ECHDC1-206ENST00000417628 BIN2Q9UBW5 565 aaPredicted RBP7.27□□□□□ -1.25
ECHDC1-206ENST00000417628 COL2A1P02458 1487 aaPredicted RBP7.27□□□□□ -1.25
ECHDC1-206ENST00000417628 RIC1Q4ADV7 1423 aa7.27□□□□□ -1.25
ECHDC1-206ENST00000417628 CENPFP49454 3210 aa7.26□□□□□ -1.25
ECHDC1-206ENST00000417628 SSC5DA1L4H1 1573 aa7.26□□□□□ -1.25
ECHDC1-206ENST00000417628 H3BRB1 525 aa7.26□□□□□ -1.25
ECHDC1-206ENST00000417628 GJB1P08034 283 aa7.26□□□□□ -1.25
ECHDC1-206ENST00000417628 MARSP56192 900 aaKnown RBP7.26□□□□□ -1.25
ECHDC1-206ENST00000417628 MTMR3Q13615 1198 aa7.26□□□□□ -1.25
ECHDC1-206ENST00000417628 MTFR1Q15390 333 aa7.26□□□□□ -1.25
ECHDC1-206ENST00000417628 ZNF530Q6P9A1 599 aaPredicted RBP7.26□□□□□ -1.25
ECHDC1-206ENST00000417628 C7orf61Q8IZ16 206 aa7.26□□□□□ -1.25
ECHDC1-206ENST00000417628 KDF1Q8NAX2 398 aaPredicted RBP7.26□□□□□ -1.25
ECHDC1-206ENST00000417628 SUPT20HQ8NEM7 779 aa7.26□□□□□ -1.25
ECHDC1-206ENST00000417628 XAGE2Q96GT9 111 aa7.26□□□□□ -1.25
ECHDC1-206ENST00000417628 TUT1Q9H6E5 874 aaKnown RBP7.26□□□□□ -1.25
ECHDC1-206ENST00000417628 RAB6BQ9NRW1 208 aa7.26□□□□□ -1.25
ECHDC1-206ENST00000417628 PGPEP1Q9NXJ5 209 aa7.26□□□□□ -1.25
ECHDC1-206ENST00000417628 PKD2L1Q9P0L9 805 aa7.26□□□□□ -1.25
ECHDC1-206ENST00000417628 ZMYND8Q9ULU4 1186 aaPredicted RBP7.26□□□□□ -1.25
ECHDC1-206ENST00000417628 PIEZO1Q92508 2521 aa7.25□□□□□ -1.25
ECHDC1-206ENST00000417628 ST20-MTHFSA0A0A6YYL1 179 aa7.25□□□□□ -1.25
ECHDC1-206ENST00000417628 A0A1W2PRU2 124 aa7.25□□□□□ -1.25
ECHDC1-206ENST00000417628 IGF2BP3O00425 579 aaKnown RBP eCLIP7.25□□□□□ -1.25
ECHDC1-206ENST00000417628 CAMTA2O94983 1202 aa7.25□□□□□ -1.25
ECHDC1-206ENST00000417628 IL2RAP01589 272 aa7.25□□□□□ -1.25
ECHDC1-206ENST00000417628 MTHFSP49914 203 aa7.25□□□□□ -1.25
ECHDC1-206ENST00000417628 FGD1P98174 961 aa7.25□□□□□ -1.25
ECHDC1-206ENST00000417628 NAA30Q147X3 362 aaPredicted RBP7.25□□□□□ -1.25
ECHDC1-206ENST00000417628 OTUD7BQ6GQQ9 843 aa7.25□□□□□ -1.25
ECHDC1-206ENST00000417628 MYLIPQ8WY64 445 aa7.25□□□□□ -1.25
ECHDC1-206ENST00000417628 SCHIP1Q9P0W5 487 aaPredicted RBP7.25□□□□□ -1.25
ECHDC1-206ENST00000417628 SUPT16HQ9Y5B9 1047 aaKnown RBP7.25□□□□□ -1.25
ECHDC1-206ENST00000417628 HRH3Q9Y5N1 445 aa7.25□□□□□ -1.25
ECHDC1-206ENST00000417628 EMILIN1Q9Y6C2 1016 aa7.25□□□□□ -1.25
ECHDC1-206ENST00000417628 MUC3AQ02505 3323 aa7.24□□□□□ -1.25
ECHDC1-206ENST00000417628 A6NJY4 79 aa7.24□□□□□ -1.25
ECHDC1-206ENST00000417628 RPS12P25398 132 aaKnown RBP7.24□□□□□ -1.25
ECHDC1-206ENST00000417628 SMTNP53814 917 aa7.24□□□□□ -1.25
ECHDC1-206ENST00000417628 NNTQ13423 1086 aa7.24□□□□□ -1.25
ECHDC1-206ENST00000417628 CRY2Q49AN0 593 aa7.24□□□□□ -1.25
ECHDC1-206ENST00000417628 C1orf141Q5JVX7 400 aa7.24□□□□□ -1.25
ECHDC1-206ENST00000417628 TMEM31Q5JXX7 168 aa7.24□□□□□ -1.25
ECHDC1-206ENST00000417628 TBCELQ5QJ74 424 aa7.24□□□□□ -1.25
ECHDC1-206ENST00000417628 ANGEL2Q5VTE6 544 aaKnown RBP7.24□□□□□ -1.25
ECHDC1-206ENST00000417628 TPTE2Q6XPS3 522 aa7.24□□□□□ -1.25
ECHDC1-206ENST00000417628 ZNF598Q86UK7 904 aaKnown RBP7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms