RNA–Protein interactions for RNA: ENST00000415807.6

FNDC3B-202, Transcript of fibronectin type III domain containing 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3B, Length 5,083 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-202ENST00000415807 PGBD1Q96JS3 809 aa13.4□□□□□ -0.27
FNDC3B-202ENST00000415807 RTL9Q8NET4 1388 aa13.4□□□□□ -0.27
FNDC3B-202ENST00000415807 ARID4AP29374 1257 aaPredicted RBP13.39□□□□□ -0.27
FNDC3B-202ENST00000415807 KRT2P35908 639 aa13.39□□□□□ -0.27
FNDC3B-202ENST00000415807 CCDC47Q96A33 483 aaKnown RBP13.39□□□□□ -0.27
FNDC3B-202ENST00000415807 EPB41L4AQ9HCS5 686 aaPredicted RBP13.39□□□□□ -0.27
FNDC3B-202ENST00000415807 TMOD2Q9NZR1 351 aa13.39□□□□□ -0.27
FNDC3B-202ENST00000415807 SMIM22K7EJ46 135 aa13.39□□□□□ -0.27
FNDC3B-202ENST00000415807 MMP10P09238 476 aa13.39□□□□□ -0.27
FNDC3B-202ENST00000415807 ANTXR2P58335 489 aa13.39□□□□□ -0.27
FNDC3B-202ENST00000415807 VEZTQ9HBM0 779 aa13.39□□□□□ -0.27
FNDC3B-202ENST00000415807 RGPD1P0DJD0 1748 aa13.39□□□□□ -0.27
FNDC3B-202ENST00000415807 XDHP47989 1333 aa13.39□□□□□ -0.27
FNDC3B-202ENST00000415807 UVSSAQ2YD98 709 aa13.39□□□□□ -0.27
FNDC3B-202ENST00000415807 NOC3LQ8WTT2 800 aaKnown RBP13.39□□□□□ -0.27
FNDC3B-202ENST00000415807 SMARCE1Q969G3 411 aa13.39□□□□□ -0.27
FNDC3B-202ENST00000415807 TMX1Q9H3N1 280 aa13.39□□□□□ -0.27
FNDC3B-202ENST00000415807 USP17L3A6NCW0 530 aa13.39□□□□□ -0.27
FNDC3B-202ENST00000415807 USP17L4A6NCW7 530 aa13.39□□□□□ -0.27
FNDC3B-202ENST00000415807 HLA-DOAP06340 250 aa13.39□□□□□ -0.27
FNDC3B-202ENST00000415807 TSGA10IPQ3SY00 556 aa13.39□□□□□ -0.27
FNDC3B-202ENST00000415807 USP17L1Q7RTZ2 530 aa13.39□□□□□ -0.27
FNDC3B-202ENST00000415807 KRI1Q8N9T8 703 aaKnown RBP13.39□□□□□ -0.27
FNDC3B-202ENST00000415807 TPM1P09493 284 aa13.38□□□□□ -0.27
FNDC3B-202ENST00000415807 UBA7P41226 1012 aa13.38□□□□□ -0.27
FNDC3B-202ENST00000415807 ZKSCAN5Q9Y2L8 839 aa13.38□□□□□ -0.27
FNDC3B-202ENST00000415807 GRAPQ13588 217 aa13.38□□□□□ -0.27
FNDC3B-202ENST00000415807 GRAPLQ8TC17 118 aaPredicted RBP13.38□□□□□ -0.27
FNDC3B-202ENST00000415807 CERKQ8TCT0 537 aa13.38□□□□□ -0.27
FNDC3B-202ENST00000415807 RASGRP4Q8TDF6 673 aa13.38□□□□□ -0.27
FNDC3B-202ENST00000415807 MAPK8IP1Q9UQF2 711 aa13.38□□□□□ -0.27
FNDC3B-202ENST00000415807 CTDNEP1O95476 244 aa13.38□□□□□ -0.27
FNDC3B-202ENST00000415807 CACNB3P54284 484 aa13.38□□□□□ -0.27
FNDC3B-202ENST00000415807 PTPN21Q16825 1174 aa13.38□□□□□ -0.27
FNDC3B-202ENST00000415807 KCNH3Q9ULD8 1083 aa13.38□□□□□ -0.27
FNDC3B-202ENST00000415807 SMTNL1A8MU46 457 aa13.38□□□□□ -0.27
FNDC3B-202ENST00000415807 UBA5Q9GZZ9 404 aa13.38□□□□□ -0.27
FNDC3B-202ENST00000415807 TXNRD1Q16881 649 aa13.37□□□□□ -0.27
FNDC3B-202ENST00000415807 ZNF827Q17R98 1081 aa13.37□□□□□ -0.27
FNDC3B-202ENST00000415807 TSR1Q2NL82 804 aaKnown RBP13.37□□□□□ -0.27
FNDC3B-202ENST00000415807 PNMA1Q8ND90 353 aa13.37□□□□□ -0.27
FNDC3B-202ENST00000415807 PLEKHA8P1O95397 391 aa13.37□□□□□ -0.27
FNDC3B-202ENST00000415807 KRT18P05783 430 aaKnown RBP13.37□□□□□ -0.27
FNDC3B-202ENST00000415807 PFKFB1P16118 471 aa13.37□□□□□ -0.27
FNDC3B-202ENST00000415807 PNOCQ13519 176 aa13.37□□□□□ -0.27
FNDC3B-202ENST00000415807 SH3RF3Q8TEJ3 882 aaPredicted RBP13.37□□□□□ -0.27
FNDC3B-202ENST00000415807 GUCY1A2P33402 732 aa13.37□□□□□ -0.27
FNDC3B-202ENST00000415807 CLCN1P35523 988 aa13.37□□□□□ -0.27
FNDC3B-202ENST00000415807 KIF23Q02241 960 aaPredicted RBP13.37□□□□□ -0.27
FNDC3B-202ENST00000415807 UQCRHLA0A096LP55 91 aa13.37□□□□□ -0.27
FNDC3B-202ENST00000415807 UQCRHP07919 91 aa13.37□□□□□ -0.27
FNDC3B-202ENST00000415807 IDEP14735 1019 aa13.37□□□□□ -0.27
FNDC3B-202ENST00000415807 HSP90AA2PQ14568 343 aaPredicted RBP13.37□□□□□ -0.27
FNDC3B-202ENST00000415807 LETM2Q2VYF4 491 aa13.37□□□□□ -0.27
FNDC3B-202ENST00000415807 CLEC17AQ6ZS10 378 aa13.37□□□□□ -0.27
FNDC3B-202ENST00000415807 NOSTRINQ8IVI9 506 aa13.37□□□□□ -0.27
FNDC3B-202ENST00000415807 LRRC47Q8N1G4 583 aaKnown RBP13.37□□□□□ -0.27
FNDC3B-202ENST00000415807 USP40Q9NVE5 1235 aa13.37□□□□□ -0.27
FNDC3B-202ENST00000415807 H0YIN7 160 aa13.36□□□□□ -0.27
FNDC3B-202ENST00000415807 CALM1P0DP23 149 aa13.36□□□□□ -0.27
FNDC3B-202ENST00000415807 CALM2P0DP24 149 aa13.36□□□□□ -0.27
FNDC3B-202ENST00000415807 CALM3P0DP25 149 aa13.36□□□□□ -0.27
FNDC3B-202ENST00000415807 EYA3Q99504 573 aa13.36□□□□□ -0.27
FNDC3B-202ENST00000415807 IFNKQ9P0W0 207 aa13.36□□□□□ -0.27
FNDC3B-202ENST00000415807 SFPQP23246 707 aaKnown RBP eCLIP13.36□□□□□ -0.276e-7■■□□□ 11.4
FNDC3B-202ENST00000415807 JAKMIP3Q5VZ66 844 aa13.36□□□□□ -0.27
FNDC3B-202ENST00000415807 FRMPD2Q68DX3 1309 aaPredicted RBP13.36□□□□□ -0.27
FNDC3B-202ENST00000415807 TNNI2P48788 182 aa13.36□□□□□ -0.27
FNDC3B-202ENST00000415807 ZYXQ15942 572 aaKnown RBP13.36□□□□□ -0.27
FNDC3B-202ENST00000415807 PRR5LQ6MZQ0 368 aa13.36□□□□□ -0.27
FNDC3B-202ENST00000415807 ADGRA1Q86SQ6 560 aa13.36□□□□□ -0.27
FNDC3B-202ENST00000415807 LY9Q9HBG7 655 aa13.36□□□□□ -0.27
FNDC3B-202ENST00000415807 CDC25AP30304 524 aa13.36□□□□□ -0.27
FNDC3B-202ENST00000415807 ADALQ6DHV7 355 aa13.36□□□□□ -0.27
FNDC3B-202ENST00000415807 SF3B3Q15393 1217 aaKnown RBP13.35□□□□□ -0.27
FNDC3B-202ENST00000415807 RILPL1Q5EBL4 403 aa13.35□□□□□ -0.27
FNDC3B-202ENST00000415807 C2CD5Q86YS7 1000 aa13.35□□□□□ -0.27
FNDC3B-202ENST00000415807 GPSM2P81274 684 aa13.35□□□□□ -0.27
FNDC3B-202ENST00000415807 CACNA1FO60840 1977 aa13.35□□□□□ -0.27
FNDC3B-202ENST00000415807 KIF28PB7ZC32 967 aa13.35□□□□□ -0.27
FNDC3B-202ENST00000415807 ZNF76P36508 570 aa13.35□□□□□ -0.27
FNDC3B-202ENST00000415807 ARPP21Q9UBL0 812 aaPredicted RBP13.35□□□□□ -0.27
FNDC3B-202ENST00000415807 TCEAL9Q9UHQ7 104 aa13.35□□□□□ -0.27
FNDC3B-202ENST00000415807 TNS2Q63HR2 1409 aa13.35□□□□□ -0.27
FNDC3B-202ENST00000415807 PPEF1O14829 653 aaPredicted RBP13.35□□□□□ -0.27
FNDC3B-202ENST00000415807 FDPSP14324 419 aaKnown RBP13.35□□□□□ -0.27
FNDC3B-202ENST00000415807 PLCG2P16885 1265 aa13.35□□□□□ -0.27
FNDC3B-202ENST00000415807 LINC00301Q8NCQ3 95 aa13.35□□□□□ -0.27
FNDC3B-202ENST00000415807 MXD3Q9BW11 206 aa13.35□□□□□ -0.27
FNDC3B-202ENST00000415807 DCP1AQ9NPI6 582 aaPredicted RBP13.35□□□□□ -0.27
FNDC3B-202ENST00000415807 LEMD3Q9Y2U8 911 aa13.35□□□□□ -0.27
FNDC3B-202ENST00000415807 MRVI1Q9Y6F6 885 aa13.35□□□□□ -0.27
FNDC3B-202ENST00000415807 PARP1P09874 1014 aaKnown RBP13.34□□□□□ -0.27
FNDC3B-202ENST00000415807 ATP2B4P23634 1241 aa13.34□□□□□ -0.27
FNDC3B-202ENST00000415807 FILIP1LQ4L180 1135 aa13.34□□□□□ -0.27
FNDC3B-202ENST00000415807 TRMT44Q8IYL2 757 aaKnown RBP13.34□□□□□ -0.27
FNDC3B-202ENST00000415807 FAM196BA6NMK8 535 aa13.34□□□□□ -0.27
FNDC3B-202ENST00000415807 COBLO75128 1261 aa13.34□□□□□ -0.27
FNDC3B-202ENST00000415807 UBASH3AP57075 661 aa13.34□□□□□ -0.27
FNDC3B-202ENST00000415807 GRAMD1CQ8IYS0 662 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms