RNA–Protein interactions for RNA: ENST00000415046.6

PTPRK-209, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 1,029 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-209ENST00000415046 C12orf49Q9H741 205 aa7.51□□□□□ -1.21
PTPRK-209ENST00000415046 P4HBP07237 508 aaKnown RBP7.5□□□□□ -1.21
PTPRK-209ENST00000415046 RING1Q06587 406 aa7.5□□□□□ -1.21
PTPRK-209ENST00000415046 RASIP1Q5U651 963 aa7.5□□□□□ -1.21
PTPRK-209ENST00000415046 LLGL2Q6P1M3 1020 aa7.5□□□□□ -1.21
PTPRK-209ENST00000415046 TOP6BLQ8N6T0 577 aa7.5□□□□□ -1.21
PTPRK-209ENST00000415046 SSU72Q9NP77 194 aaKnown RBP7.5□□□□□ -1.21
PTPRK-209ENST00000415046 FAM8A1Q9UBU6 413 aa7.5□□□□□ -1.21
PTPRK-209ENST00000415046 TOPBP1Q92547 1522 aa7.5□□□□□ -1.21
PTPRK-209ENST00000415046 ABCC8Q09428 1581 aa7.5□□□□□ -1.21
PTPRK-209ENST00000415046 CEACAM5P06731 702 aa7.49□□□□□ -1.21
PTPRK-209ENST00000415046 CELA3AP09093 270 aa7.49□□□□□ -1.21
PTPRK-209ENST00000415046 JUNBP17275 347 aaPredicted RBP7.49□□□□□ -1.21
PTPRK-209ENST00000415046 OXCT1P55809 520 aa7.49□□□□□ -1.21
PTPRK-209ENST00000415046 LRRC14Q15048 493 aa7.49□□□□□ -1.21
PTPRK-209ENST00000415046 IFI16Q16666 785 aaKnown RBP7.49□□□□□ -1.21
PTPRK-209ENST00000415046 PPM1JQ5JR12 505 aa7.49□□□□□ -1.21
PTPRK-209ENST00000415046 TRAIPQ9BWF2 469 aa7.49□□□□□ -1.21
PTPRK-209ENST00000415046 USP17L7P0C7H9 530 aa7.48□□□□□ -1.21
PTPRK-209ENST00000415046 PLCL1Q15111 1095 aa7.48□□□□□ -1.21
PTPRK-209ENST00000415046 PCNX4Q63HM2 1172 aa7.48□□□□□ -1.21
PTPRK-209ENST00000415046 VAV3Q9UKW4 847 aa7.48□□□□□ -1.21
PTPRK-209ENST00000415046 CYP8B1Q9UNU6 501 aa7.48□□□□□ -1.21
PTPRK-209ENST00000415046 DCDC2CA8MYV0 355 aa7.47□□□□□ -1.21
PTPRK-209ENST00000415046 PATL2C9JE40 543 aaKnown RBP7.47□□□□□ -1.21
PTPRK-209ENST00000415046 FANCGO15287 622 aa7.47□□□□□ -1.21
PTPRK-209ENST00000415046 FUT4P22083 530 aa7.47□□□□□ -1.21
PTPRK-209ENST00000415046 PRKCQQ04759 706 aa7.47□□□□□ -1.21
PTPRK-209ENST00000415046 BNIP3Q12983 259 aa7.47□□□□□ -1.21
PTPRK-209ENST00000415046 ZNF792Q3KQV3 632 aa7.47□□□□□ -1.21
PTPRK-209ENST00000415046 ZBTB37Q5TC79 503 aa7.47□□□□□ -1.21
PTPRK-209ENST00000415046 UBE3DQ7Z6J8 389 aa7.47□□□□□ -1.21
PTPRK-209ENST00000415046 FRMD6Q96NE9 622 aa7.47□□□□□ -1.21
PTPRK-209ENST00000415046 CSADQ9Y600 493 aa7.47□□□□□ -1.21
PTPRK-209ENST00000415046 CUX1P39880 1505 aa7.47□□□□□ -1.21
PTPRK-209ENST00000415046 BIVM-ERCC5R4GMW8 1640 aa7.46□□□□□ -1.21
PTPRK-209ENST00000415046 LDHBP07195 334 aaKnown RBP7.46□□□□□ -1.22
PTPRK-209ENST00000415046 CD8BP10966 210 aa7.46□□□□□ -1.22
PTPRK-209ENST00000415046 ARHGAP27Q6ZUM4 889 aa7.46□□□□□ -1.22
PTPRK-209ENST00000415046 FAM214BQ7L5A3 538 aa7.46□□□□□ -1.22
PTPRK-209ENST00000415046 C12orf40Q86WS4 652 aa7.46□□□□□ -1.22
PTPRK-209ENST00000415046 ASIC4Q96FT7 647 aa7.46□□□□□ -1.22
PTPRK-209ENST00000415046 HEXIM2Q96MH2 286 aaKnown RBP7.46□□□□□ -1.22
PTPRK-209ENST00000415046 TNKS2Q9H2K2 1166 aa7.46□□□□□ -1.22
PTPRK-209ENST00000415046 PRDM10Q9NQV6 1147 aa7.46□□□□□ -1.22
PTPRK-209ENST00000415046 PCDHA4Q9UN74 947 aa7.46□□□□□ -1.22
PTPRK-209ENST00000415046 PLAGL2Q9UPG8 496 aa7.46□□□□□ -1.22
PTPRK-209ENST00000415046 SYNJ1O43426 1573 aa7.46□□□□□ -1.22
PTPRK-209ENST00000415046 WDR97A6NE52 1622 aa7.45□□□□□ -1.22
PTPRK-209ENST00000415046 TMEM265A0A087WTH1 108 aa7.45□□□□□ -1.22
PTPRK-209ENST00000415046 KRTAP4-8A0A0G2JLE6 195 aa7.45□□□□□ -1.22
PTPRK-209ENST00000415046 PAPLNO95428 1278 aa7.45□□□□□ -1.22
PTPRK-209ENST00000415046 SV2BQ7L1I2 683 aa7.45□□□□□ -1.22
PTPRK-209ENST00000415046 HRASLS5Q96KN8 279 aa7.45□□□□□ -1.22
PTPRK-209ENST00000415046 PICK1Q9NRD5 415 aa7.45□□□□□ -1.22
PTPRK-209ENST00000415046 TARBP1Q13395 1621 aaKnown RBP7.45□□□□□ -1.22
PTPRK-209ENST00000415046 IGF2BP3O00425 579 aaKnown RBP eCLIP7.44□□□□□ -1.22
PTPRK-209ENST00000415046 YBX3P16989 372 aaKnown RBP eCLIP7.44□□□□□ -1.22
PTPRK-209ENST00000415046 GNA15P30679 374 aa7.44□□□□□ -1.22
PTPRK-209ENST00000415046 KCT2Q8NC54 265 aa7.44□□□□□ -1.22
PTPRK-209ENST00000415046 GAL3ST3Q96A11 431 aa7.44□□□□□ -1.22
PTPRK-209ENST00000415046 ELMO3Q96BJ8 720 aa7.44□□□□□ -1.22
PTPRK-209ENST00000415046 GTF2IRD1Q9UHL9 959 aa7.44□□□□□ -1.22
PTPRK-209ENST00000415046 TTF2Q9UNY4 1162 aaKnown RBP7.44□□□□□ -1.22
PTPRK-209ENST00000415046 FGD5Q6ZNL6 1462 aa7.43□□□□□ -1.22
PTPRK-209ENST00000415046 EIF4G3O43432 1585 aaKnown RBP7.43□□□□□ -1.22
PTPRK-209ENST00000415046 TOP2BQ02880 1626 aa7.43□□□□□ -1.22
PTPRK-209ENST00000415046 PRPF40AO75400 957 aaKnown RBP7.43□□□□□ -1.22
PTPRK-209ENST00000415046 ITIH2P19823 946 aa7.43□□□□□ -1.22
PTPRK-209ENST00000415046 CD96P40200 585 aa7.43□□□□□ -1.22
PTPRK-209ENST00000415046 AOC3Q16853 763 aa7.43□□□□□ -1.22
PTPRK-209ENST00000415046 ARMCX6Q7L4S7 300 aa7.43□□□□□ -1.22
PTPRK-209ENST00000415046 MBNL3Q9NUK0 354 aaKnown RBP7.43□□□□□ -1.22
PTPRK-209ENST00000415046 SNX11Q9Y5W9 270 aa7.43□□□□□ -1.22
PTPRK-209ENST00000415046 PBRM1Q86U86 1689 aa7.43□□□□□ -1.22
PTPRK-209ENST00000415046 POLA1P09884 1462 aaPredicted RBP7.43□□□□□ -1.22
PTPRK-209ENST00000415046 EIF4BP23588 611 aaKnown RBP7.42□□□□□ -1.22
PTPRK-209ENST00000415046 PTPN11Q06124 597 aaPredicted RBP7.42□□□□□ -1.22
PTPRK-209ENST00000415046 INPP5AQ14642 412 aa7.42□□□□□ -1.22
PTPRK-209ENST00000415046 OGFOD2Q6N063 350 aa7.42□□□□□ -1.22
PTPRK-209ENST00000415046 LRFN4Q6PJG9 635 aa7.42□□□□□ -1.22
PTPRK-209ENST00000415046 CDC37L1Q7L3B6 337 aa7.42□□□□□ -1.22
PTPRK-209ENST00000415046 CYFIP1Q7L576 1253 aa7.42□□□□□ -1.22
PTPRK-209ENST00000415046 SPACA3Q8IXA5 215 aa7.42□□□□□ -1.22
PTPRK-209ENST00000415046 ADAMTS6Q9UKP5 1117 aa7.42□□□□□ -1.22
PTPRK-209ENST00000415046 CHD1O14646 1710 aa7.41□□□□□ -1.22
PTPRK-209ENST00000415046 LRIG2O94898 1065 aa7.41□□□□□ -1.22
PTPRK-209ENST00000415046 EOMESO95936 686 aa7.41□□□□□ -1.22
PTPRK-209ENST00000415046 RNASE1P07998 156 aaKnown RBP7.41□□□□□ -1.22
PTPRK-209ENST00000415046 ANGEL2Q5VTE6 544 aaKnown RBP7.41□□□□□ -1.22
PTPRK-209ENST00000415046 TTBK2Q6IQ55 1244 aa7.41□□□□□ -1.22
PTPRK-209ENST00000415046 ZNF507Q8TCN5 953 aa7.41□□□□□ -1.22
PTPRK-209ENST00000415046 PLPPR2Q96GM1 343 aa7.41□□□□□ -1.22
PTPRK-209ENST00000415046 RC3H2Q9HBD1 1191 aaKnown RBP7.41□□□□□ -1.22
PTPRK-209ENST00000415046 WRNQ14191 1432 aaPredicted RBP eCLIP7.41□□□□□ -1.22
PTPRK-209ENST00000415046 IFT140Q96RY7 1462 aa7.41□□□□□ -1.22
PTPRK-209ENST00000415046 RAD54L2Q9Y4B4 1467 aa7.41□□□□□ -1.22
PTPRK-209ENST00000415046 PRAMEF27A3QJZ7 478 aa7.4□□□□□ -1.22
PTPRK-209ENST00000415046 BIN1O00499 593 aa7.4□□□□□ -1.22
PTPRK-209ENST00000415046 RPS26P62854 115 aaKnown RBP7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms