RNA–Protein interactions for RNA: ENST00000409777.5

CUL3-204, Transcript of cullin 3, humanhuman

TSL 1 (best) BASIC

Gene CUL3, Length 3,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-204ENST00000409777 TXLNBQ8N3L3 684 aa3.63□□□□□ -1.83
CUL3-204ENST00000409777 FSIP1Q8NA03 581 aa3.63□□□□□ -1.83
CUL3-204ENST00000409777 RABGGTAQ92696 567 aa3.63□□□□□ -1.83
CUL3-204ENST00000409777 EXOC4Q96A65 974 aa3.63□□□□□ -1.83
CUL3-204ENST00000409777 FSD1Q9BTV5 496 aa3.63□□□□□ -1.83
CUL3-204ENST00000409777 FTOQ9C0B1 505 aaKnown RBP eCLIP3.63□□□□□ -1.83
CUL3-204ENST00000409777 FEZ2Q9UHY8 353 aaPredicted RBP3.63□□□□□ -1.83
CUL3-204ENST00000409777 CASZ1Q86V15 1759 aa3.63□□□□□ -1.83
CUL3-204ENST00000409777 GOLGA6L4A6NEF3 574 aa3.63□□□□□ -1.83
CUL3-204ENST00000409777 E7EWF7 191 aa3.63□□□□□ -1.83
CUL3-204ENST00000409777 CIAO1O76071 339 aa3.63□□□□□ -1.83
CUL3-204ENST00000409777 HNRNPH2P55795 449 aaKnown RBP3.63□□□□□ -1.83
CUL3-204ENST00000409777 TUBB4BP68371 445 aa3.63□□□□□ -1.83
CUL3-204ENST00000409777 FOXO4P98177 505 aa3.63□□□□□ -1.83
CUL3-204ENST00000409777 FANCCQ00597 558 aa3.63□□□□□ -1.83
CUL3-204ENST00000409777 G3BP1Q13283 466 aaKnown RBP eCLIP3.63□□□□□ -1.83
CUL3-204ENST00000409777 TUBB2AQ13885 445 aa3.63□□□□□ -1.83
CUL3-204ENST00000409777 SLC39A14Q15043 492 aa3.63□□□□□ -1.83
CUL3-204ENST00000409777 QPCTQ16769 361 aa3.63□□□□□ -1.83
CUL3-204ENST00000409777 PLEKHO1Q53GL0 409 aaPredicted RBP3.63□□□□□ -1.83
CUL3-204ENST00000409777 JAKMIP3Q5VZ66 844 aa3.63□□□□□ -1.83
CUL3-204ENST00000409777 DRC7Q8IY82 874 aa3.63□□□□□ -1.83
CUL3-204ENST00000409777 KCNH5Q8NCM2 988 aa3.63□□□□□ -1.83
CUL3-204ENST00000409777 FBXO18Q8NFZ0 1043 aa3.63□□□□□ -1.83
CUL3-204ENST00000409777 IPO4Q8TEX9 1081 aaKnown RBP3.63□□□□□ -1.83
CUL3-204ENST00000409777 ANKRD24Q8TF21 1146 aa3.63□□□□□ -1.83
CUL3-204ENST00000409777 RBM33Q96EV2 1170 aaKnown RBP3.63□□□□□ -1.83
CUL3-204ENST00000409777 UCN2Q96RP3 112 aa3.63□□□□□ -1.83
CUL3-204ENST00000409777 TUBB2BQ9BVA1 445 aa3.63□□□□□ -1.83
CUL3-204ENST00000409777 HCSTQ9UBK5 93 aa3.63□□□□□ -1.83
CUL3-204ENST00000409777 MEGF6O75095 1541 aa3.63□□□□□ -1.83
CUL3-204ENST00000409777 MAST3O60307 1309 aa3.62□□□□□ -1.83
CUL3-204ENST00000409777 STK36Q9NRP7 1315 aa3.62□□□□□ -1.83
CUL3-204ENST00000409777 KIF28PB7ZC32 967 aa3.62□□□□□ -1.83
CUL3-204ENST00000409777 H7C1W4 665 aa3.62□□□□□ -1.83
CUL3-204ENST00000409777 ARHGAP6O43182 974 aa3.62□□□□□ -1.83
CUL3-204ENST00000409777 STX10O60499 249 aa3.62□□□□□ -1.83
CUL3-204ENST00000409777 ANTXR2P58335 489 aa3.62□□□□□ -1.83
CUL3-204ENST00000409777 KIF23Q02241 960 aaPredicted RBP3.62□□□□□ -1.83
CUL3-204ENST00000409777 BRD3Q15059 726 aa3.62□□□□□ -1.83
CUL3-204ENST00000409777 SYT10Q6XYQ8 523 aa3.62□□□□□ -1.83
CUL3-204ENST00000409777 TC2NQ8N9U0 490 aa3.62□□□□□ -1.83
CUL3-204ENST00000409777 TCEANC2Q96MN5 208 aa3.62□□□□□ -1.83
CUL3-204ENST00000409777 ADAM33Q9BZ11 813 aa3.62□□□□□ -1.83
CUL3-204ENST00000409777 CCDC8Q9H0W5 538 aaPredicted RBP3.62□□□□□ -1.83
CUL3-204ENST00000409777 C19orf44Q9H6X5 657 aa3.62□□□□□ -1.83
CUL3-204ENST00000409777 EFCC1Q9HA90 598 aa3.62□□□□□ -1.83
CUL3-204ENST00000409777 IFNKQ9P0W0 207 aa3.62□□□□□ -1.83
CUL3-204ENST00000409777 LAMB1P07942 1786 aa3.62□□□□□ -1.83
CUL3-204ENST00000409777 RIC1Q4ADV7 1423 aa3.62□□□□□ -1.83
CUL3-204ENST00000409777 CCDC151A5D8V7 595 aa3.62□□□□□ -1.83
CUL3-204ENST00000409777 SH2B2O14492 632 aaPredicted RBP3.62□□□□□ -1.83
CUL3-204ENST00000409777 ARHGAP33O14559 1287 aa3.62□□□□□ -1.83
CUL3-204ENST00000409777 CBFA2T2O43439 604 aa3.62□□□□□ -1.83
CUL3-204ENST00000409777 DTNBO60941 627 aa3.62□□□□□ -1.83
CUL3-204ENST00000409777 WDHD1O75717 1129 aaPredicted RBP3.62□□□□□ -1.83
CUL3-204ENST00000409777 ZNF202O95125 648 aa3.62□□□□□ -1.83
CUL3-204ENST00000409777 DDX58O95786 925 aaKnown RBP3.62□□□□□ -1.83
CUL3-204ENST00000409777 CPP00450 1065 aa3.62□□□□□ -1.83
CUL3-204ENST00000409777 HSPD1P10809 573 aaKnown RBP3.62□□□□□ -1.83
CUL3-204ENST00000409777 PFKFB1P16118 471 aa3.62□□□□□ -1.83
CUL3-204ENST00000409777 BMP6P22004 513 aa3.62□□□□□ -1.83
CUL3-204ENST00000409777 SFPQP23246 707 aaKnown RBP eCLIP3.62□□□□□ -1.83
CUL3-204ENST00000409777 TPM4P67936 248 aa3.62□□□□□ -1.83
CUL3-204ENST00000409777 RAD51AP2Q09MP3 1159 aa3.62□□□□□ -1.83
CUL3-204ENST00000409777 ARHGAP29Q52LW3 1261 aa3.62□□□□□ -1.83
CUL3-204ENST00000409777 SHC4Q6S5L8 630 aa3.62□□□□□ -1.83
CUL3-204ENST00000409777 DNAJC14Q6Y2X3 702 aaPredicted RBP3.62□□□□□ -1.83
CUL3-204ENST00000409777 RBM46Q8TBY0 533 aaKnown RBP3.62□□□□□ -1.83
CUL3-204ENST00000409777 DDX54Q8TDD1 881 aaKnown RBP3.62□□□□□ -1.83
CUL3-204ENST00000409777 DPF2Q92785 391 aa3.62□□□□□ -1.83
CUL3-204ENST00000409777 DDX11Q96FC9 970 aa3.62□□□□□ -1.83
CUL3-204ENST00000409777 ZNF512BQ96KM6 892 aaPredicted RBP3.62□□□□□ -1.83
CUL3-204ENST00000409777 MED15Q96RN5 788 aa3.62□□□□□ -1.83
CUL3-204ENST00000409777 PPP1R12CQ9BZL4 782 aa3.62□□□□□ -1.83
CUL3-204ENST00000409777 NBPF3Q9H094 633 aa3.62□□□□□ -1.83
CUL3-204ENST00000409777 BOLA2Q9H3K6 86 aa3.62□□□□□ -1.83
CUL3-204ENST00000409777 VRTNQ9H8Y1 702 aa3.62□□□□□ -1.83
CUL3-204ENST00000409777 C9orf78Q9NZ63 289 aaPredicted RBP3.62□□□□□ -1.83
CUL3-204ENST00000409777 PPP2R2CQ9Y2T4 447 aa3.62□□□□□ -1.83
CUL3-204ENST00000409777 CLIC4Q9Y696 253 aa3.62□□□□□ -1.83
CUL3-204ENST00000409777 ZC3H4Q9UPT8 1303 aaKnown RBP3.62□□□□□ -1.83
CUL3-204ENST00000409777 PHLPP1O60346 1717 aa3.62□□□□□ -1.83
CUL3-204ENST00000409777 MYH6P13533 1939 aa3.62□□□□□ -1.83
CUL3-204ENST00000409777 PRAMEF22A3QJZ6 481 aa3.61□□□□□ -1.83
CUL3-204ENST00000409777 PALM3A6NDB9 673 aaPredicted RBP3.61□□□□□ -1.83
CUL3-204ENST00000409777 H3BQV1 296 aa3.61□□□□□ -1.83
CUL3-204ENST00000409777 SPTLC2O15270 562 aa3.61□□□□□ -1.83
CUL3-204ENST00000409777 ZNF16P17020 682 aaPredicted RBP3.61□□□□□ -1.83
CUL3-204ENST00000409777 SCNN1AP37088 669 aa3.61□□□□□ -1.83
CUL3-204ENST00000409777 NOP2P46087 812 aaKnown RBP3.61□□□□□ -1.83
CUL3-204ENST00000409777 AARSP49588 968 aaKnown RBP eCLIP3.61□□□□□ -1.83
CUL3-204ENST00000409777 MYL5Q02045 173 aa3.61□□□□□ -1.83
CUL3-204ENST00000409777 APOBRQ0VD83 1088 aa3.61□□□□□ -1.83
CUL3-204ENST00000409777 TFCP2Q12800 502 aa3.61□□□□□ -1.83
CUL3-204ENST00000409777 ANO1Q5XXA6 986 aa3.61□□□□□ -1.83
CUL3-204ENST00000409777 ZNF662Q6ZS27 426 aa3.61□□□□□ -1.83
CUL3-204ENST00000409777 TMC6Q7Z403 805 aa3.61□□□□□ -1.83
CUL3-204ENST00000409777 METTL16Q86W50 562 aaKnown RBP3.61□□□□□ -1.83
CUL3-204ENST00000409777 GOLGA5Q8TBA6 731 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms