RNA–Protein interactions for RNA: ENST00000409286.5

LIMS2-204, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2 BASIC

Gene LIMS2, Length 1,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-204ENST00000409286 YEATS4O95619 227 aa22.49■■□□□ 1.19
LIMS2-204ENST00000409286 TRIM22Q8IYM9 498 aa22.49■■□□□ 1.19
LIMS2-204ENST00000409286 RNF214Q8ND24 703 aa22.49■■□□□ 1.19
LIMS2-204ENST00000409286 TRIM44Q96DX7 344 aaPredicted RBP22.49■■□□□ 1.19
LIMS2-204ENST00000409286 PDLIM2Q96JY6 352 aa22.49■■□□□ 1.19
LIMS2-204ENST00000409286 GPR101Q96P66 508 aaPredicted RBP22.49■■□□□ 1.19
LIMS2-204ENST00000409286 NOL10Q9BSC4 688 aaKnown RBP22.49■■□□□ 1.19
LIMS2-204ENST00000409286 SLC26A6Q9BXS9 759 aa22.49■■□□□ 1.19
LIMS2-204ENST00000409286 POLLQ9UGP5 575 aa22.49■■□□□ 1.19
LIMS2-204ENST00000409286 SMIM22K7EJ46 135 aa22.49■■□□□ 1.19
LIMS2-204ENST00000409286 PPEF1O14829 653 aaPredicted RBP22.49■■□□□ 1.19
LIMS2-204ENST00000409286 RBM43Q6ZSC3 357 aaKnown RBP22.49■■□□□ 1.19
LIMS2-204ENST00000409286 FTOQ9C0B1 505 aaKnown RBP eCLIP22.49■■□□□ 1.19
LIMS2-204ENST00000409286 TNMDQ9H2S6 317 aa22.49■■□□□ 1.19
LIMS2-204ENST00000409286 KIF28PB7ZC32 967 aa22.48■■□□□ 1.19
LIMS2-204ENST00000409286 POLR3DP05423 398 aaPredicted RBP22.48■■□□□ 1.19
LIMS2-204ENST00000409286 CCDC192P0DO97 292 aa22.48■■□□□ 1.19
LIMS2-204ENST00000409286 PDE4BQ07343 736 aa22.48■■□□□ 1.19
LIMS2-204ENST00000409286 CRACR2BQ8N4Y2 399 aaPredicted RBP22.48■■□□□ 1.19
LIMS2-204ENST00000409286 ENAHQ8N8S7 591 aaPredicted RBP22.48■■□□□ 1.19
LIMS2-204ENST00000409286 KCNG4Q8TDN1 519 aa22.48■■□□□ 1.19
LIMS2-204ENST00000409286 AIFM3Q96NN9 605 aa22.48■■□□□ 1.19
LIMS2-204ENST00000409286 GJB4Q9NTQ9 266 aa22.48■■□□□ 1.19
LIMS2-204ENST00000409286 MKRN1Q9UHC7 482 aaKnown RBP22.48■■□□□ 1.19
LIMS2-204ENST00000409286 ATP6V0A2Q9Y487 856 aa22.48■■□□□ 1.19
LIMS2-204ENST00000409286 NR1I2O75469 434 aa22.47■■□□□ 1.19
LIMS2-204ENST00000409286 CALM1P0DP23 149 aa22.47■■□□□ 1.19
LIMS2-204ENST00000409286 CALM2P0DP24 149 aa22.47■■□□□ 1.19
LIMS2-204ENST00000409286 CALM3P0DP25 149 aa22.47■■□□□ 1.19
LIMS2-204ENST00000409286 NPR1P16066 1061 aa22.47■■□□□ 1.19
LIMS2-204ENST00000409286 IFIT1BQ5T764 474 aaKnown RBP22.47■■□□□ 1.19
LIMS2-204ENST00000409286 CATIPQ7Z7H3 387 aa22.47■■□□□ 1.19
LIMS2-204ENST00000409286 NBPF11Q86T75 865 aa22.47■■□□□ 1.19
LIMS2-204ENST00000409286 CCAR1Q8IX12 1150 aaKnown RBP22.47■■□□□ 1.19
LIMS2-204ENST00000409286 LINC00301Q8NCQ3 95 aa22.47■■□□□ 1.19
LIMS2-204ENST00000409286 TBC1D22AQ8WUA7 517 aa22.47■■□□□ 1.19
LIMS2-204ENST00000409286 BAZ2AQ9UIF9 1905 aaKnown RBP22.47■■□□□ 1.19
LIMS2-204ENST00000409286 MROH7-TTC4A0A0A0MT08 1334 aa22.46■■□□□ 1.19
LIMS2-204ENST00000409286 USP5P45974 858 aa22.46■■□□□ 1.19
LIMS2-204ENST00000409286 NUP133Q8WUM0 1156 aa22.46■■□□□ 1.19
LIMS2-204ENST00000409286 MCM9Q9NXL9 1143 aa22.46■■□□□ 1.19
LIMS2-204ENST00000409286 A0A1W2PQ27 194 aa22.46■■□□□ 1.19
LIMS2-204ENST00000409286 A0A1W2PQ64 194 aa22.46■■□□□ 1.19
LIMS2-204ENST00000409286 A0A1W2PQD8 194 aa22.46■■□□□ 1.19
LIMS2-204ENST00000409286 C6orf229H3BNL8 230 aa22.46■■□□□ 1.19
LIMS2-204ENST00000409286 PRDM1O75626 825 aa22.46■■□□□ 1.19
LIMS2-204ENST00000409286 DEXIO95424 95 aa22.46■■□□□ 1.19
LIMS2-204ENST00000409286 SRGNP10124 158 aa22.46■■□□□ 1.19
LIMS2-204ENST00000409286 U2AF2P26368 475 aaKnown RBP eCLIP22.46■■□□□ 1.19
LIMS2-204ENST00000409286 ALDH1B1P30837 517 aa22.46■■□□□ 1.19
LIMS2-204ENST00000409286 PDE6BP35913 854 aa22.46■■□□□ 1.19
LIMS2-204ENST00000409286 ME1P48163 572 aa22.46■■□□□ 1.19
LIMS2-204ENST00000409286 STK38Q15208 465 aa22.46■■□□□ 1.19
LIMS2-204ENST00000409286 GRIK5Q16478 980 aa22.46■■□□□ 1.19
LIMS2-204ENST00000409286 C12orf60Q5U649 245 aa22.46■■□□□ 1.19
LIMS2-204ENST00000409286 ADALQ6DHV7 355 aa22.46■■□□□ 1.19
LIMS2-204ENST00000409286 SLF2Q8IX21 1173 aa22.46■■□□□ 1.19
LIMS2-204ENST00000409286 SH3RF3Q8TEJ3 882 aaPredicted RBP22.46■■□□□ 1.19
LIMS2-204ENST00000409286 FAM163AQ96GL9 167 aaPredicted RBP22.46■■□□□ 1.19
LIMS2-204ENST00000409286 RBM28Q9NW13 759 aaKnown RBP22.46■■□□□ 1.19
LIMS2-204ENST00000409286 NRXN2Q9P2S2 1712 aa22.45■■□□□ 1.19
LIMS2-204ENST00000409286 FAM205AQ6ZU69 1335 aa22.45■■□□□ 1.18
LIMS2-204ENST00000409286 LRRC37AA6NMS7 1700 aa22.45■■□□□ 1.18
LIMS2-204ENST00000409286 DDAH1O94760 285 aa22.45■■□□□ 1.18
LIMS2-204ENST00000409286 CCDC73Q6ZRK6 1079 aa22.45■■□□□ 1.18
LIMS2-204ENST00000409286 PCDHA7Q9UN72 937 aa22.45■■□□□ 1.18
LIMS2-204ENST00000409286 CLIC4Q9Y696 253 aa22.45■■□□□ 1.18
LIMS2-204ENST00000409286 PARP3Q9Y6F1 533 aa22.45■■□□□ 1.18
LIMS2-204ENST00000409286 TNS1Q9HBL0 1735 aaKnown RBP22.44■■□□□ 1.18
LIMS2-204ENST00000409286 CTAGE5O15320 804 aa22.44■■□□□ 1.18
LIMS2-204ENST00000409286 CYP2D6P10635 497 aa22.44■■□□□ 1.18
LIMS2-204ENST00000409286 GNL2Q13823 731 aaKnown RBP22.44■■□□□ 1.18
LIMS2-204ENST00000409286 SF3A1Q15459 793 aaKnown RBP22.44■■□□□ 1.18
LIMS2-204ENST00000409286 DIXDC1Q155Q3 683 aa22.44■■□□□ 1.18
LIMS2-204ENST00000409286 CAMK4Q16566 473 aa22.44■■□□□ 1.18
LIMS2-204ENST00000409286 ANO1Q5XXA6 986 aa22.44■■□□□ 1.18
LIMS2-204ENST00000409286 AMOTL1Q8IY63 956 aa22.44■■□□□ 1.18
LIMS2-204ENST00000409286 RTFDC1Q9BY42 306 aaPredicted RBP22.44■■□□□ 1.18
LIMS2-204ENST00000409286 GPR75-ASB3A0A0A6YYF3 556 aa22.43■■□□□ 1.18
LIMS2-204ENST00000409286 SPTLC2O15270 562 aa22.43■■□□□ 1.18
LIMS2-204ENST00000409286 USP17L8P0C7I0 530 aa22.43■■□□□ 1.18
LIMS2-204ENST00000409286 HS1BP3Q53T59 392 aa22.43■■□□□ 1.18
LIMS2-204ENST00000409286 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.43■■□□□ 1.18
LIMS2-204ENST00000409286 RNF26Q9BY78 433 aaPredicted RBP22.43■■□□□ 1.18
LIMS2-204ENST00000409286 COA1Q9GZY4 146 aa22.43■■□□□ 1.18
LIMS2-204ENST00000409286 LAMB1P07942 1786 aa22.43■■□□□ 1.18
LIMS2-204ENST00000409286 PLCG2P16885 1265 aa22.42■■□□□ 1.18
LIMS2-204ENST00000409286 FAM160A1Q05DH4 1040 aa22.42■■□□□ 1.18
LIMS2-204ENST00000409286 SAFBQ15424 915 aaKnown RBP eCLIP22.42■■□□□ 1.18
LIMS2-204ENST00000409286 ENGASEQ8NFI3 743 aa22.42■■□□□ 1.18
LIMS2-204ENST00000409286 ROBO3Q96MS0 1386 aa22.42■■□□□ 1.18
LIMS2-204ENST00000409286 MMP10P09238 476 aa22.42■■□□□ 1.18
LIMS2-204ENST00000409286 TROAPQ12815 778 aa22.42■■□□□ 1.18
LIMS2-204ENST00000409286 SNW1Q13573 536 aaKnown RBP22.42■■□□□ 1.18
LIMS2-204ENST00000409286 SLC39A14Q15043 492 aa22.42■■□□□ 1.18
LIMS2-204ENST00000409286 CCDC178Q5BJE1 867 aa22.42■■□□□ 1.18
LIMS2-204ENST00000409286 FSIP1Q8NA03 581 aa22.42■■□□□ 1.18
LIMS2-204ENST00000409286 MRPS27Q92552 414 aaKnown RBP22.42■■□□□ 1.18
LIMS2-204ENST00000409286 GOLPH3LQ9H4A5 285 aa22.42■■□□□ 1.18
LIMS2-204ENST00000409286 LTBP1Q14766 1721 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms