RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 ZSCAN12O43309 604 aa5.66□□□□□ -1.5
SCN3A-203ENST00000409101 RPL13P26373 211 aaKnown RBP5.66□□□□□ -1.5
SCN3A-203ENST00000409101 PIK3AP1Q6ZUJ8 805 aa5.66□□□□□ -1.5
SCN3A-203ENST00000409101 MIER3Q7Z3K6 550 aa5.66□□□□□ -1.5
SCN3A-203ENST00000409101 SPAG5Q96R06 1193 aa5.66□□□□□ -1.5
SCN3A-203ENST00000409101 CENPHQ9H3R5 247 aa5.66□□□□□ -1.5
SCN3A-203ENST00000409101 CCPG1Q9ULG6 757 aa5.66□□□□□ -1.5
SCN3A-203ENST00000409101 HEG1Q9ULI3 1381 aa5.66□□□□□ -1.5
SCN3A-203ENST00000409101 PTPRMP28827 1452 aa5.66□□□□□ -1.5
SCN3A-203ENST00000409101 FRMPD2Q68DX3 1309 aaPredicted RBP5.66□□□□□ -1.5
SCN3A-203ENST00000409101 SMC1AQ14683 1233 aaKnown RBP5.66□□□□□ -1.5
SCN3A-203ENST00000409101 ZNF174Q15697 407 aa5.66□□□□□ -1.5
SCN3A-203ENST00000409101 MCTP2Q6DN12 878 aa5.66□□□□□ -1.5
SCN3A-203ENST00000409101 OTUD6BQ8N6M0 293 aa5.66□□□□□ -1.5
SCN3A-203ENST00000409101 TMEM106CQ9BVX2 250 aa5.66□□□□□ -1.5
SCN3A-203ENST00000409101 COA1Q9GZY4 146 aa5.66□□□□□ -1.5
SCN3A-203ENST00000409101 V9GY48 417 aaPredicted RBP5.66□□□□□ -1.5
SCN3A-203ENST00000409101 ADCY10Q96PN6 1610 aa5.66□□□□□ -1.5
SCN3A-203ENST00000409101 CLASP1Q7Z460 1538 aa5.66□□□□□ -1.5
SCN3A-203ENST00000409101 CALUO43852 315 aaPredicted RBP5.66□□□□□ -1.5
SCN3A-203ENST00000409101 KIF5CO60282 957 aa5.66□□□□□ -1.5
SCN3A-203ENST00000409101 ERLIN1O75477 346 aa5.66□□□□□ -1.5
SCN3A-203ENST00000409101 MARCKSP29966 332 aaPredicted RBP5.66□□□□□ -1.5
SCN3A-203ENST00000409101 PLCD1P51178 756 aa5.66□□□□□ -1.5
SCN3A-203ENST00000409101 DNA2P51530 1060 aa5.66□□□□□ -1.5
SCN3A-203ENST00000409101 SNX16P57768 344 aa5.66□□□□□ -1.5
SCN3A-203ENST00000409101 NONOQ15233 471 aaKnown RBP eCLIP5.66□□□□□ -1.5
SCN3A-203ENST00000409101 PLIN2Q99541 437 aa5.66□□□□□ -1.5
SCN3A-203ENST00000409101 NARFQ9UHQ1 456 aa5.66□□□□□ -1.5
SCN3A-203ENST00000409101 KCNG1Q9UIX4 513 aa5.66□□□□□ -1.5
SCN3A-203ENST00000409101 ANGEL1Q9UNK9 670 aaKnown RBP5.66□□□□□ -1.5
SCN3A-203ENST00000409101 TRIM35Q9UPQ4 493 aa5.66□□□□□ -1.5
SCN3A-203ENST00000409101 ARHGAP31Q2M1Z3 1444 aa5.66□□□□□ -1.5
SCN3A-203ENST00000409101 AOX1Q06278 1338 aa5.66□□□□□ -1.5
SCN3A-203ENST00000409101 IGSF1Q8N6C5 1336 aa5.66□□□□□ -1.5
SCN3A-203ENST00000409101 USP17L8P0C7I0 530 aa5.66□□□□□ -1.5
SCN3A-203ENST00000409101 CLEC4GQ6UXB4 293 aa5.66□□□□□ -1.5
SCN3A-203ENST00000409101 APOBEC3FQ8IUX4 373 aaKnown RBP5.66□□□□□ -1.5
SCN3A-203ENST00000409101 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.66□□□□□ -1.5
SCN3A-203ENST00000409101 TET3O43151 1660 aa5.65□□□□□ -1.5
SCN3A-203ENST00000409101 TMEM232C9JQI7 657 aa5.65□□□□□ -1.5
SCN3A-203ENST00000409101 EPB41P11171 864 aaKnown RBP5.65□□□□□ -1.5
SCN3A-203ENST00000409101 SFPQP23246 707 aaKnown RBP eCLIP5.65□□□□□ -1.5
SCN3A-203ENST00000409101 TBC1D10BQ4KMP7 808 aaPredicted RBP5.65□□□□□ -1.5
SCN3A-203ENST00000409101 KBTBD3Q8NAB2 608 aa5.65□□□□□ -1.5
SCN3A-203ENST00000409101 CTAGE1Q96RT6 745 aa5.65□□□□□ -1.5
SCN3A-203ENST00000409101 PRR36Q9H6K5 1346 aa5.65□□□□□ -1.5
SCN3A-203ENST00000409101 COL15A1P39059 1388 aa5.65□□□□□ -1.5
SCN3A-203ENST00000409101 ECE2O60344 883 aa5.65□□□□□ -1.5
SCN3A-203ENST00000409101 ZSCAN22P10073 491 aaPredicted RBP5.65□□□□□ -1.5
SCN3A-203ENST00000409101 PPP2R5BQ15173 497 aa5.65□□□□□ -1.5
SCN3A-203ENST00000409101 SLFN13Q68D06 897 aa5.65□□□□□ -1.5
SCN3A-203ENST00000409101 ISM2Q6H9L7 571 aa5.65□□□□□ -1.5
SCN3A-203ENST00000409101 LUZP1Q86V48 1076 aa5.65□□□□□ -1.5
SCN3A-203ENST00000409101 LRRC47Q8N1G4 583 aaKnown RBP5.65□□□□□ -1.5
SCN3A-203ENST00000409101 PROCA1Q8NCQ7 364 aaPredicted RBP5.65□□□□□ -1.5
SCN3A-203ENST00000409101 PRPF4BQ13523 1007 aaKnown RBP5.65□□□□□ -1.5
SCN3A-203ENST00000409101 MAEAQ7L5Y9 396 aa5.65□□□□□ -1.5
SCN3A-203ENST00000409101 BRAPQ7Z569 592 aa5.65□□□□□ -1.5
SCN3A-203ENST00000409101 ADD3Q9UEY8 706 aaKnown RBP5.65□□□□□ -1.5
SCN3A-203ENST00000409101 SYCE3A1L190 88 aa5.65□□□□□ -1.51
SCN3A-203ENST00000409101 CIAO1O76071 339 aa5.65□□□□□ -1.51
SCN3A-203ENST00000409101 EEF2P13639 858 aaKnown RBP5.65□□□□□ -1.51
SCN3A-203ENST00000409101 KRT5P13647 590 aa5.65□□□□□ -1.51
SCN3A-203ENST00000409101 CASQ1P31415 396 aa5.65□□□□□ -1.51
SCN3A-203ENST00000409101 TXKP42681 527 aa5.65□□□□□ -1.51
SCN3A-203ENST00000409101 BIRC2Q13490 618 aa5.65□□□□□ -1.51
SCN3A-203ENST00000409101 FBXO11Q86XK2 927 aa5.65□□□□□ -1.51
SCN3A-203ENST00000409101 COA7Q96BR5 231 aa5.65□□□□□ -1.51
SCN3A-203ENST00000409101 ZNF277Q9NRM2 450 aaPredicted RBP5.65□□□□□ -1.51
SCN3A-203ENST00000409101 N4BP3O15049 544 aa5.65□□□□□ -1.51
SCN3A-203ENST00000409101 PRPF6O94906 941 aaKnown RBP5.65□□□□□ -1.51
SCN3A-203ENST00000409101 ZBTB8OSQ8IWT0 167 aa5.65□□□□□ -1.51
SCN3A-203ENST00000409101 ABI1Q8IZP0 508 aa5.65□□□□□ -1.51
SCN3A-203ENST00000409101 DEPTORQ8TB45 409 aa5.65□□□□□ -1.51
SCN3A-203ENST00000409101 MRPS27Q92552 414 aaKnown RBP5.65□□□□□ -1.51
SCN3A-203ENST00000409101 TMX3Q96JJ7 454 aa5.65□□□□□ -1.51
SCN3A-203ENST00000409101 ZSCAN10Q96SZ4 725 aaPredicted RBP5.65□□□□□ -1.51
SCN3A-203ENST00000409101 PLVAPQ9BX97 442 aa5.65□□□□□ -1.51
SCN3A-203ENST00000409101 SEC31BQ9NQW1 1179 aa5.65□□□□□ -1.51
SCN3A-203ENST00000409101 NRBP2Q9NSY0 501 aa5.65□□□□□ -1.51
SCN3A-203ENST00000409101 ATP8A2Q9NTI2 1148 aa5.65□□□□□ -1.51
SCN3A-203ENST00000409101 HACL1Q9UJ83 578 aa5.65□□□□□ -1.51
SCN3A-203ENST00000409101 ZHX1Q9UKY1 873 aaPredicted RBP5.65□□□□□ -1.51
SCN3A-203ENST00000409101 USP17L12C9JPN9 530 aa5.64□□□□□ -1.51
SCN3A-203ENST00000409101 USP17L21D6R901 530 aa5.64□□□□□ -1.51
SCN3A-203ENST00000409101 GAS7O60861 476 aa5.64□□□□□ -1.51
SCN3A-203ENST00000409101 CHMLP26374 656 aa5.64□□□□□ -1.51
SCN3A-203ENST00000409101 TMOD1P28289 359 aa5.64□□□□□ -1.51
SCN3A-203ENST00000409101 YARSP54577 528 aaKnown RBP5.64□□□□□ -1.51
SCN3A-203ENST00000409101 AOC3Q16853 763 aa5.64□□□□□ -1.51
SCN3A-203ENST00000409101 ELMSAN1Q6PJG2 1045 aa5.64□□□□□ -1.51
SCN3A-203ENST00000409101 CCDC125Q86Z20 511 aa5.64□□□□□ -1.51
SCN3A-203ENST00000409101 CCDC17Q96LX7 622 aa5.64□□□□□ -1.51
SCN3A-203ENST00000409101 DHX36Q9H2U1 1008 aaKnown RBP5.64□□□□□ -1.51
SCN3A-203ENST00000409101 CD2APQ9Y5K6 639 aa5.64□□□□□ -1.51
SCN3A-203ENST00000409101 CAMSAP1Q5T5Y3 1602 aa5.64□□□□□ -1.51
SCN3A-203ENST00000409101 GJC1P36383 396 aa5.64□□□□□ -1.51
SCN3A-203ENST00000409101 CALCRLQ16602 461 aa5.64□□□□□ -1.51
SCN3A-203ENST00000409101 RETREG2Q8NC44 543 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms