RNA–Protein interactions for RNA: ENST00000404040.5

HDAC11-204, Transcript of histone deacetylase 11, humanhuman

TSL 3 BASIC

Gene HDAC11, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-204ENST00000404040 DEFB118Q96PH6 123 aa22.11■■□□□ 1.13
HDAC11-204ENST00000404040 CUL9Q8IWT3 2517 aa22.11■■□□□ 1.13
HDAC11-204ENST00000404040 COL6A3P12111 3177 aa22.11■■□□□ 1.13
HDAC11-204ENST00000404040 RHBDL3P58872 404 aa22.1■■□□□ 1.13
HDAC11-204ENST00000404040 FAM110CQ1W6H9 321 aa22.1■■□□□ 1.13
HDAC11-204ENST00000404040 TREML2Q5T2D2 321 aa22.1■■□□□ 1.13
HDAC11-204ENST00000404040 SPTY2D1Q68D10 685 aaPredicted RBP22.1■■□□□ 1.13
HDAC11-204ENST00000404040 ANKRD13CQ8N6S4 541 aa22.1■■□□□ 1.13
HDAC11-204ENST00000404040 PNMA3Q9UL41 463 aa22.1■■□□□ 1.13
HDAC11-204ENST00000404040 MYO5AQ9Y4I1 1855 aaKnown RBP22.1■■□□□ 1.13
HDAC11-204ENST00000404040 A0A1W2PPC1 479 aa22.09■■□□□ 1.13
HDAC11-204ENST00000404040 TBC1D12O60347 775 aa22.09■■□□□ 1.13
HDAC11-204ENST00000404040 EVI5O60447 810 aa22.09■■□□□ 1.13
HDAC11-204ENST00000404040 ZNF384Q8TF68 577 aa22.09■■□□□ 1.13
HDAC11-204ENST00000404040 COA7Q96BR5 231 aa22.09■■□□□ 1.13
HDAC11-204ENST00000404040 CRISPLD2Q9H0B8 497 aa22.09■■□□□ 1.13
HDAC11-204ENST00000404040 GPR75-ASB3A0A0A6YYF3 556 aa22.08■■□□□ 1.13
HDAC11-204ENST00000404040 A0A1B0GUL7 405 aa22.08■■□□□ 1.13
HDAC11-204ENST00000404040 NPM3O75607 178 aaKnown RBP22.08■■□□□ 1.13
HDAC11-204ENST00000404040 TFRCP02786 760 aaKnown RBP22.08■■□□□ 1.13
HDAC11-204ENST00000404040 TIMM10P62072 90 aa22.08■■□□□ 1.13
HDAC11-204ENST00000404040 MECOMQ03112 1051 aa22.08■■□□□ 1.13
HDAC11-204ENST00000404040 PROCA1Q8NCQ7 364 aaPredicted RBP22.08■■□□□ 1.13
HDAC11-204ENST00000404040 CLUAP1Q96AJ1 413 aa22.08■■□□□ 1.13
HDAC11-204ENST00000404040 TAOK2Q9UL54 1235 aa22.08■■□□□ 1.13
HDAC11-204ENST00000404040 FAM196BA6NMK8 535 aa22.07■■□□□ 1.12
HDAC11-204ENST00000404040 PDE3AQ14432 1141 aa22.07■■□□□ 1.12
HDAC11-204ENST00000404040 MVPQ14764 893 aaKnown RBP22.07■■□□□ 1.12
HDAC11-204ENST00000404040 XAGE2Q96GT9 111 aa22.07■■□□□ 1.12
HDAC11-204ENST00000404040 MEIS3Q99687 375 aa22.07■■□□□ 1.12
HDAC11-204ENST00000404040 FRMPD3Q5JV73 1810 aa22.06■■□□□ 1.12
HDAC11-204ENST00000404040 ERICH6Q7L0X2 663 aa22.06■■□□□ 1.12
HDAC11-204ENST00000404040 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.06■■□□□ 1.12
HDAC11-204ENST00000404040 OSBPL5Q9H0X9 879 aaPredicted RBP22.06■■□□□ 1.12
HDAC11-204ENST00000404040 CHMP4BQ9H444 224 aaKnown RBP22.06■■□□□ 1.12
HDAC11-204ENST00000404040 PAWRQ96IZ0 340 aaKnown RBP22.05■■□□□ 1.12
HDAC11-204ENST00000404040 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.05■■□□□ 1.12
HDAC11-204ENST00000404040 AKAP2Q9Y2D5 859 aa22.05■■□□□ 1.12
HDAC11-204ENST00000404040 MAP4K4O95819 1239 aaPredicted RBP22.04■■□□□ 1.12
HDAC11-204ENST00000404040 HMGCRP04035 888 aa22.04■■□□□ 1.12
HDAC11-204ENST00000404040 GNAI3P08754 354 aa22.04■■□□□ 1.12
HDAC11-204ENST00000404040 GCLCP48506 637 aaPredicted RBP22.04■■□□□ 1.12
HDAC11-204ENST00000404040 RRP1P56182 461 aaKnown RBP22.04■■□□□ 1.12
HDAC11-204ENST00000404040 TFCP2Q12800 502 aa22.04■■□□□ 1.12
HDAC11-204ENST00000404040 SPP2Q13103 211 aa22.04■■□□□ 1.12
HDAC11-204ENST00000404040 TMEM57Q8N5G2 664 aa22.04■■□□□ 1.12
HDAC11-204ENST00000404040 ZNF280CQ8ND82 737 aa22.04■■□□□ 1.12
HDAC11-204ENST00000404040 DIS3LQ8TF46 1054 aaKnown RBP22.04■■□□□ 1.12
HDAC11-204ENST00000404040 TBC1D2Q9BYX2 928 aa22.04■■□□□ 1.12
HDAC11-204ENST00000404040 SOX1O00570 391 aaPredicted RBP22.03■■□□□ 1.12
HDAC11-204ENST00000404040 HMGCS2P54868 508 aa22.03■■□□□ 1.12
HDAC11-204ENST00000404040 ITPRIPQ8IWB1 547 aa22.03■■□□□ 1.12
HDAC11-204ENST00000404040 NSUN4Q96CB9 384 aaKnown RBP22.03■■□□□ 1.12
HDAC11-204ENST00000404040 HMG20BQ9P0W2 317 aa22.03■■□□□ 1.12
HDAC11-204ENST00000404040 SRGAP3O43295 1099 aa22.02■■□□□ 1.12
HDAC11-204ENST00000404040 GSTO1P78417 241 aa22.02■■□□□ 1.12
HDAC11-204ENST00000404040 PABPC4Q13310 644 aaKnown RBP eCLIP22.02■■□□□ 1.12
HDAC11-204ENST00000404040 MTX1Q13505 466 aa22.02■■□□□ 1.12
HDAC11-204ENST00000404040 PI16Q6UXB8 463 aa22.02■■□□□ 1.12
HDAC11-204ENST00000404040 NECAB2Q7Z6G3 386 aa22.02■■□□□ 1.12
HDAC11-204ENST00000404040 ANKLE1Q8NAG6 615 aa22.02■■□□□ 1.12
HDAC11-204ENST00000404040 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.02■■□□□ 1.12
HDAC11-204ENST00000404040 MYH1P12882 1939 aa22.02■■□□□ 1.11
HDAC11-204ENST00000404040 CENPBP07199 599 aaPredicted RBP22.01■■□□□ 1.11
HDAC11-204ENST00000404040 LDHCP07864 332 aa22.01■■□□□ 1.11
HDAC11-204ENST00000404040 CAP2P40123 477 aa22.01■■□□□ 1.11
HDAC11-204ENST00000404040 RRP1BQ14684 758 aaKnown RBP22.01■■□□□ 1.11
HDAC11-204ENST00000404040 SPATA5Q8NB90 893 aa22.01■■□□□ 1.11
HDAC11-204ENST00000404040 ASCC2Q9H1I8 757 aaPredicted RBP22.01■■□□□ 1.11
HDAC11-204ENST00000404040 STAP2Q9UGK3 403 aa22.01■■□□□ 1.11
HDAC11-204ENST00000404040 TNNQ9UQP3 1299 aa22.01■■□□□ 1.11
HDAC11-204ENST00000404040 TBC1D9Q6ZT07 1266 aa22■■□□□ 1.11
HDAC11-204ENST00000404040 LRCH3Q96II8 777 aa22■■□□□ 1.11
HDAC11-204ENST00000404040 GJD2Q9UKL4 321 aa22■■□□□ 1.11
HDAC11-204ENST00000404040 DDX19BQ9UMR2 479 aa22■■□□□ 1.11
HDAC11-204ENST00000404040 USP17L5A8MUK1 530 aa21.99■■□□□ 1.11
HDAC11-204ENST00000404040 RLBP1P12271 317 aa21.99■■□□□ 1.11
HDAC11-204ENST00000404040 ARID4AP29374 1257 aaPredicted RBP21.99■■□□□ 1.11
HDAC11-204ENST00000404040 SH3D19Q5HYK7 790 aa21.99■■□□□ 1.11
HDAC11-204ENST00000404040 PANK1Q8TE04 598 aa21.99■■□□□ 1.11
HDAC11-204ENST00000404040 NEUROD6Q96NK8 337 aa21.99■■□□□ 1.11
HDAC11-204ENST00000404040 MORF4L1Q9UBU8 362 aa21.99■■□□□ 1.11
HDAC11-204ENST00000404040 HERC5Q9UII4 1024 aaKnown RBP21.99■■□□□ 1.11
HDAC11-204ENST00000404040 RPTORQ8N122 1335 aa21.99■■□□□ 1.11
HDAC11-204ENST00000404040 TRIM32Q13049 653 aa21.98■■□□□ 1.11
HDAC11-204ENST00000404040 TEX11Q8IYF3 940 aa21.98■■□□□ 1.11
HDAC11-204ENST00000404040 C7orf61Q8IZ16 206 aa21.98■■□□□ 1.11
HDAC11-204ENST00000404040 GDF15Q99988 308 aa21.98■■□□□ 1.11
HDAC11-204ENST00000404040 AS3MTQ9HBK9 375 aa21.98■■□□□ 1.11
HDAC11-204ENST00000404040 RAI14Q9P0K7 980 aa21.98■■□□□ 1.11
HDAC11-204ENST00000404040 A0A0C4DFX4 3053 aa21.98■■□□□ 1.11
HDAC11-204ENST00000404040 GORABQ5T7V8 394 aa21.97■■□□□ 1.11
HDAC11-204ENST00000404040 TRIB2Q92519 343 aa21.97■■□□□ 1.11
HDAC11-204ENST00000404040 HMX1Q9NP08 348 aaPredicted RBP21.97■■□□□ 1.11
HDAC11-204ENST00000404040 BMP8BP34820 402 aa21.96■■□□□ 1.11
HDAC11-204ENST00000404040 MCAMP43121 646 aa21.96■■□□□ 1.11
HDAC11-204ENST00000404040 MNX1P50219 401 aaPredicted RBP21.96■■□□□ 1.11
HDAC11-204ENST00000404040 MTMR2Q13614 643 aa21.96■■□□□ 1.11
HDAC11-204ENST00000404040 SH3RF3Q8TEJ3 882 aaPredicted RBP21.96■■□□□ 1.11
HDAC11-204ENST00000404040 NBPF3Q9H094 633 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms