RNA–Protein interactions for RNA: ENST00000402583.5

CBX1-203, Transcript of chromobox 1, humanhuman

TSL 4

Gene CBX1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-203ENST00000402583 CCNL1Q9UK58 526 aaPredicted RBP10.78□□□□□ -0.68
CBX1-203ENST00000402583 USP21Q9UK80 565 aa10.78□□□□□ -0.68
CBX1-203ENST00000402583 BECN2A8MW95 431 aa10.77□□□□□ -0.69
CBX1-203ENST00000402583 GNPATO15228 680 aa10.77□□□□□ -0.69
CBX1-203ENST00000402583 PRKAB2O43741 272 aa10.77□□□□□ -0.69
CBX1-203ENST00000402583 PPFIA3O75145 1194 aa10.77□□□□□ -0.69
CBX1-203ENST00000402583 DEXIO95424 95 aa10.77□□□□□ -0.69
CBX1-203ENST00000402583 CALM1P0DP23 149 aa10.77□□□□□ -0.69
CBX1-203ENST00000402583 CALM2P0DP24 149 aa10.77□□□□□ -0.69
CBX1-203ENST00000402583 CALM3P0DP25 149 aa10.77□□□□□ -0.69
CBX1-203ENST00000402583 XBP1P17861 261 aa10.77□□□□□ -0.69
CBX1-203ENST00000402583 CMA1P23946 247 aa10.77□□□□□ -0.69
CBX1-203ENST00000402583 CDC27P30260 824 aa10.77□□□□□ -0.69
CBX1-203ENST00000402583 CDC25BP30305 580 aa10.77□□□□□ -0.69
CBX1-203ENST00000402583 HIBADHP31937 336 aaKnown RBP10.77□□□□□ -0.69
CBX1-203ENST00000402583 TPM4P67936 248 aa10.77□□□□□ -0.69
CBX1-203ENST00000402583 SNW1Q13573 536 aaKnown RBP10.77□□□□□ -0.69
CBX1-203ENST00000402583 SLC39A14Q15043 492 aa10.77□□□□□ -0.69
CBX1-203ENST00000402583 LUZP1Q86V48 1076 aa10.77□□□□□ -0.69
CBX1-203ENST00000402583 FMR1NBQ8N0W7 255 aaPredicted RBP10.77□□□□□ -0.69
CBX1-203ENST00000402583 MIGA1Q8NAN2 632 aa10.77□□□□□ -0.69
CBX1-203ENST00000402583 PIBF1Q8WXW3 757 aa10.77□□□□□ -0.69
CBX1-203ENST00000402583 SLC26A6Q9BXS9 759 aa10.77□□□□□ -0.69
CBX1-203ENST00000402583 FTOQ9C0B1 505 aaKnown RBP eCLIP10.77□□□□□ -0.69
CBX1-203ENST00000402583 DNAJC25Q9H1X3 360 aa10.77□□□□□ -0.69
CBX1-203ENST00000402583 CLIC4Q9Y696 253 aa10.77□□□□□ -0.69
CBX1-203ENST00000402583 C4AP0C0L4 1744 aa10.77□□□□□ -0.69
CBX1-203ENST00000402583 C4BP0C0L5 1744 aa10.77□□□□□ -0.69
CBX1-203ENST00000402583 MINDY4BA8MYZ0 360 aa10.76□□□□□ -0.69
CBX1-203ENST00000402583 NPHP1O15259 732 aa10.76□□□□□ -0.69
CBX1-203ENST00000402583 U2AF2P26368 475 aaKnown RBP eCLIP10.76□□□□□ -0.693e-7■■■■■ 27.8
CBX1-203ENST00000402583 HMGB2P26583 209 aaKnown RBP10.76□□□□□ -0.69
CBX1-203ENST00000402583 ZNF75DP51815 510 aa10.76□□□□□ -0.69
CBX1-203ENST00000402583 AKAP17AQ02040 695 aaKnown RBP10.76□□□□□ -0.69
CBX1-203ENST00000402583 NTRK3Q16288 839 aa10.76□□□□□ -0.69
CBX1-203ENST00000402583 ASTLQ6HA08 431 aaPredicted RBP10.76□□□□□ -0.69
CBX1-203ENST00000402583 SARM1Q6SZW1 724 aa10.76□□□□□ -0.69
CBX1-203ENST00000402583 C3orf67Q6ZVT6 689 aa10.76□□□□□ -0.69
CBX1-203ENST00000402583 DRC7Q8IY82 874 aa10.76□□□□□ -0.69
CBX1-203ENST00000402583 CELF1Q92879 486 aaKnown RBP10.76□□□□□ -0.69
CBX1-203ENST00000402583 PHKBQ93100 1093 aa10.76□□□□□ -0.69
CBX1-203ENST00000402583 FAM84BQ96KN1 310 aaPredicted RBP10.76□□□□□ -0.69
CBX1-203ENST00000402583 TIGD1Q96MW7 591 aa10.76□□□□□ -0.69
CBX1-203ENST00000402583 RIOK1Q9BRS2 568 aaKnown RBP10.76□□□□□ -0.69
CBX1-203ENST00000402583 NOL10Q9BSC4 688 aaKnown RBP10.76□□□□□ -0.69
CBX1-203ENST00000402583 CRNKL1Q9BZJ0 848 aaKnown RBP10.76□□□□□ -0.69
CBX1-203ENST00000402583 TRIM5Q9C035 493 aa10.76□□□□□ -0.69
CBX1-203ENST00000402583 BCL2L12Q9HB09 334 aa10.76□□□□□ -0.69
CBX1-203ENST00000402583 RBM28Q9NW13 759 aaKnown RBP10.76□□□□□ -0.69
CBX1-203ENST00000402583 TCHHQ07283 1943 aa10.76□□□□□ -0.69
CBX1-203ENST00000402583 NHSQ6T4R5 1651 aa10.76□□□□□ -0.69
CBX1-203ENST00000402583 KIF28PB7ZC32 967 aa10.75□□□□□ -0.69
CBX1-203ENST00000402583 ATMINO43313 823 aaPredicted RBP10.75□□□□□ -0.69
CBX1-203ENST00000402583 CUTAO60888 179 aa10.75□□□□□ -0.69
CBX1-203ENST00000402583 RFC4P35249 363 aa10.75□□□□□ -0.69
CBX1-203ENST00000402583 DHX8Q14562 1220 aaKnown RBP10.75□□□□□ -0.69
CBX1-203ENST00000402583 TRAPPC3LQ5T215 181 aa10.75□□□□□ -0.69
CBX1-203ENST00000402583 CATIPQ7Z7H3 387 aa10.75□□□□□ -0.69
CBX1-203ENST00000402583 IQCA1Q86XH1 822 aa10.75□□□□□ -0.69
CBX1-203ENST00000402583 PLA2G4DQ86XP0 818 aa10.75□□□□□ -0.69
CBX1-203ENST00000402583 CCDC144CPQ8IYA2 1237 aa10.75□□□□□ -0.69
CBX1-203ENST00000402583 ZNF654Q8IZM8 581 aa10.75□□□□□ -0.69
CBX1-203ENST00000402583 FANCBQ8NB91 859 aa10.75□□□□□ -0.69
CBX1-203ENST00000402583 BPIFA3Q9BQP9 254 aa10.75□□□□□ -0.69
CBX1-203ENST00000402583 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.75□□□□□ -0.69
CBX1-203ENST00000402583 FOXP1Q9H334 677 aaPredicted RBP10.75□□□□□ -0.69
CBX1-203ENST00000402583 ATP8A2Q9NTI2 1148 aa10.75□□□□□ -0.69
CBX1-203ENST00000402583 FAM217BQ9NTX9 383 aaPredicted RBP10.75□□□□□ -0.69
CBX1-203ENST00000402583 HOOK1Q9UJC3 728 aaKnown RBP10.75□□□□□ -0.69
CBX1-203ENST00000402583 CEP131Q9UPN4 1083 aa10.75□□□□□ -0.69
CBX1-203ENST00000402583 IQSEC3Q9UPP2 1182 aaPredicted RBP10.75□□□□□ -0.69
CBX1-203ENST00000402583 MYH15Q9Y2K3 1946 aa10.75□□□□□ -0.69
CBX1-203ENST00000402583 THSD7AQ9UPZ6 1657 aa10.74□□□□□ -0.69
CBX1-203ENST00000402583 A0A1B0GVL5 298 aa10.74□□□□□ -0.69
CBX1-203ENST00000402583 RANBP6O60518 1105 aaKnown RBP10.74□□□□□ -0.69
CBX1-203ENST00000402583 NEMFO60524 1076 aa10.74□□□□□ -0.69
CBX1-203ENST00000402583 MMP1P03956 469 aa10.74□□□□□ -0.69
CBX1-203ENST00000402583 RXRAP19793 462 aa10.74□□□□□ -0.69
CBX1-203ENST00000402583 NDUFA8P51970 172 aa10.74□□□□□ -0.69
CBX1-203ENST00000402583 RBM6P78332 1123 aaKnown RBP10.74□□□□□ -0.69
CBX1-203ENST00000402583 GSTO1P78417 241 aa10.74□□□□□ -0.69
CBX1-203ENST00000402583 NOLC1Q14978 699 aaKnown RBP eCLIP10.74□□□□□ -0.69
CBX1-203ENST00000402583 IQCB1Q15051 598 aa10.74□□□□□ -0.69
CBX1-203ENST00000402583 RILPL1Q5EBL4 403 aa10.74□□□□□ -0.69
CBX1-203ENST00000402583 NOSTRINQ8IVI9 506 aa10.74□□□□□ -0.69
CBX1-203ENST00000402583 CRACR2BQ8N4Y2 399 aaPredicted RBP10.74□□□□□ -0.69
CBX1-203ENST00000402583 SDR42E1Q8WUS8 393 aa10.74□□□□□ -0.69
CBX1-203ENST00000402583 ZSCAN10Q96SZ4 725 aaPredicted RBP10.74□□□□□ -0.69
CBX1-203ENST00000402583 MYL10Q9BUA6 226 aa10.74□□□□□ -0.69
CBX1-203ENST00000402583 RNF26Q9BY78 433 aaPredicted RBP10.74□□□□□ -0.69
CBX1-203ENST00000402583 SENP2Q9HC62 589 aa10.74□□□□□ -0.69
CBX1-203ENST00000402583 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.74□□□□□ -0.69
CBX1-203ENST00000402583 KIAA1468Q9P260 1216 aa10.74□□□□□ -0.69
CBX1-203ENST00000402583 ARPP21Q9UBL0 812 aaPredicted RBP10.74□□□□□ -0.69
CBX1-203ENST00000402583 LEMD3Q9Y2U8 911 aa10.74□□□□□ -0.69
CBX1-203ENST00000402583 COL24A1Q17RW2 1714 aa10.74□□□□□ -0.69
CBX1-203ENST00000402583 TNKSO95271 1327 aa10.74□□□□□ -0.69
CBX1-203ENST00000402583 MYH14Q7Z406 1995 aaKnown RBP10.74□□□□□ -0.69
CBX1-203ENST00000402583 FAM237AA0A1B0GTK4 181 aa10.73□□□□□ -0.69
CBX1-203ENST00000402583 SMTNL1A8MU46 457 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms