RNA–Protein interactions for RNA: ENST00000400259.5

CDC42-203, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CDC42, Length 2,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-203ENST00000400259 ZNF165P49910 485 aa18.24■□□□□ 0.51
CDC42-203ENST00000400259 STX1AQ16623 288 aa18.24■□□□□ 0.51
CDC42-203ENST00000400259 CTR9Q6PD62 1173 aa18.24■□□□□ 0.51
CDC42-203ENST00000400259 C15orf52Q6ZUT6 534 aaKnown RBP18.24■□□□□ 0.51
CDC42-203ENST00000400259 TRIM22Q8IYM9 498 aa18.24■□□□□ 0.51
CDC42-203ENST00000400259 FANCBQ8NB91 859 aa18.24■□□□□ 0.51
CDC42-203ENST00000400259 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.24■□□□□ 0.514e-7■■□□□ 12.1
CDC42-203ENST00000400259 PPP6R2O75170 966 aa18.23■□□□□ 0.51
CDC42-203ENST00000400259 SPTY2D1Q68D10 685 aaPredicted RBP18.23■□□□□ 0.51
CDC42-203ENST00000400259 TXNRD3Q86VQ6 643 aa18.23■□□□□ 0.51
CDC42-203ENST00000400259 CRACR2BQ8N4Y2 399 aaPredicted RBP18.23■□□□□ 0.51
CDC42-203ENST00000400259 CRNKL1Q9BZJ0 848 aaKnown RBP18.23■□□□□ 0.51
CDC42-203ENST00000400259 ATP8A2Q9NTI2 1148 aa18.23■□□□□ 0.51
CDC42-203ENST00000400259 NPHP1O15259 732 aa18.23■□□□□ 0.51
CDC42-203ENST00000400259 OFD1O75665 1012 aa18.23■□□□□ 0.51
CDC42-203ENST00000400259 DEXIO95424 95 aa18.23■□□□□ 0.51
CDC42-203ENST00000400259 CMA1P23946 247 aa18.23■□□□□ 0.51
CDC42-203ENST00000400259 CERKQ8TCT0 537 aa18.23■□□□□ 0.51
CDC42-203ENST00000400259 ZSCAN10Q96SZ4 725 aaPredicted RBP18.23■□□□□ 0.51
CDC42-203ENST00000400259 MAP3K14Q99558 947 aa18.23■□□□□ 0.51
CDC42-203ENST00000400259 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.23■□□□□ 0.51
CDC42-203ENST00000400259 DNAJC25Q9H1X3 360 aa18.23■□□□□ 0.51
CDC42-203ENST00000400259 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.23■□□□□ 0.513e-6■■■□□ 16.2
CDC42-203ENST00000400259 CDK5RAP2Q96SN8 1893 aa18.22■□□□□ 0.51
CDC42-203ENST00000400259 ORC4O43929 436 aa18.22■□□□□ 0.51
CDC42-203ENST00000400259 PRDX5P30044 214 aa18.22■□□□□ 0.51
CDC42-203ENST00000400259 NDUFA8P51970 172 aa18.22■□□□□ 0.51
CDC42-203ENST00000400259 PTPAQ15257 358 aa18.22■□□□□ 0.51
CDC42-203ENST00000400259 SBK1Q52WX2 424 aa18.22■□□□□ 0.51
CDC42-203ENST00000400259 A0A1B0GVL5 298 aa18.21■□□□□ 0.51
CDC42-203ENST00000400259 MMP1P03956 469 aa18.21■□□□□ 0.51
CDC42-203ENST00000400259 ENAHQ8N8S7 591 aaPredicted RBP18.21■□□□□ 0.51
CDC42-203ENST00000400259 DCP1AQ9NPI6 582 aaPredicted RBP18.21■□□□□ 0.51
CDC42-203ENST00000400259 NAV1Q8NEY1 1877 aa18.21■□□□□ 0.51
CDC42-203ENST00000400259 XDHP47989 1333 aa18.21■□□□□ 0.51
CDC42-203ENST00000400259 LRRC37AA6NMS7 1700 aa18.21■□□□□ 0.51
CDC42-203ENST00000400259 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.21■□□□□ 0.51
CDC42-203ENST00000400259 SMIM22K7EJ46 135 aa18.21■□□□□ 0.51
CDC42-203ENST00000400259 TPM3P06753 285 aa18.21■□□□□ 0.51
CDC42-203ENST00000400259 CHAF1AQ13111 956 aaPredicted RBP18.21■□□□□ 0.51
CDC42-203ENST00000400259 GNL2Q13823 731 aaKnown RBP18.21■□□□□ 0.51
CDC42-203ENST00000400259 CRY2Q49AN0 593 aa18.21■□□□□ 0.51
CDC42-203ENST00000400259 SLC27A3Q5K4L6 730 aa18.21■□□□□ 0.51
CDC42-203ENST00000400259 PRR5LQ6MZQ0 368 aa18.21■□□□□ 0.51
CDC42-203ENST00000400259 STK11IPQ8N1F8 1099 aa18.21■□□□□ 0.51
CDC42-203ENST00000400259 JMYQ8N9B5 988 aa18.21■□□□□ 0.51
CDC42-203ENST00000400259 RNF26Q9BY78 433 aaPredicted RBP18.21■□□□□ 0.51
CDC42-203ENST00000400259 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.21■□□□□ 0.51
CDC42-203ENST00000400259 FAM237AA0A1B0GTK4 181 aa18.2■□□□□ 0.5
CDC42-203ENST00000400259 USP17L12C9JPN9 530 aa18.2■□□□□ 0.5
CDC42-203ENST00000400259 USP17L21D6R901 530 aa18.2■□□□□ 0.5
CDC42-203ENST00000400259 GUCY1A2P33402 732 aa18.2■□□□□ 0.5
CDC42-203ENST00000400259 IQCB1Q15051 598 aa18.2■□□□□ 0.5
CDC42-203ENST00000400259 WDR66Q8TBY9 1149 aa18.2■□□□□ 0.5
CDC42-203ENST00000400259 ZNF830Q96NB3 372 aaPredicted RBP18.2■□□□□ 0.5
CDC42-203ENST00000400259 ARPP21Q9UBL0 812 aaPredicted RBP18.2■□□□□ 0.5
CDC42-203ENST00000400259 CYP2D7A0A087X1C5 515 aa18.2■□□□□ 0.5
CDC42-203ENST00000400259 UBE2Q2LH0YL09 131 aa18.2■□□□□ 0.5
CDC42-203ENST00000400259 HSPA1LP34931 641 aa18.2■□□□□ 0.5
CDC42-203ENST00000400259 NT5C2P49902 561 aa18.2■□□□□ 0.5
CDC42-203ENST00000400259 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.2■□□□□ 0.5
CDC42-203ENST00000400259 IQCA1Q86XH1 822 aa18.2■□□□□ 0.5
CDC42-203ENST00000400259 NOSTRINQ8IVI9 506 aa18.2■□□□□ 0.5
CDC42-203ENST00000400259 FOXP1Q9H334 677 aaPredicted RBP18.2■□□□□ 0.5
CDC42-203ENST00000400259 ANO10Q9NW15 660 aa18.2■□□□□ 0.5
CDC42-203ENST00000400259 AATFQ9NY61 560 aaKnown RBP eCLIP18.2■□□□□ 0.52e-6■■■□□ 17.9
CDC42-203ENST00000400259 LTBP1Q14766 1721 aa18.19■□□□□ 0.5
CDC42-203ENST00000400259 WDHD1O75717 1129 aaPredicted RBP18.19■□□□□ 0.5
CDC42-203ENST00000400259 GYS1P13807 737 aa18.19■□□□□ 0.5
CDC42-203ENST00000400259 PLCB2Q00722 1185 aa18.19■□□□□ 0.5
CDC42-203ENST00000400259 TIGD1Q96MW7 591 aa18.19■□□□□ 0.5
CDC42-203ENST00000400259 ANKIB1Q9P2G1 1089 aa18.19■□□□□ 0.5
CDC42-203ENST00000400259 CALM1P0DP23 149 aa18.19■□□□□ 0.5
CDC42-203ENST00000400259 CALM2P0DP24 149 aa18.19■□□□□ 0.5
CDC42-203ENST00000400259 CALM3P0DP25 149 aa18.19■□□□□ 0.5
CDC42-203ENST00000400259 SAFBQ15424 915 aaKnown RBP eCLIP18.19■□□□□ 0.5
CDC42-203ENST00000400259 C11orf57Q6ZUT1 292 aaPredicted RBP18.19■□□□□ 0.5
CDC42-203ENST00000400259 NUP133Q8WUM0 1156 aa18.19■□□□□ 0.5
CDC42-203ENST00000400259 RBM28Q9NW13 759 aaKnown RBP18.19■□□□□ 0.5
CDC42-203ENST00000400259 HPSEQ9Y251 543 aa18.19■□□□□ 0.5
CDC42-203ENST00000400259 MROH7-TTC4A0A0A0MT08 1334 aa18.18■□□□□ 0.5
CDC42-203ENST00000400259 DDAH1O94760 285 aa18.18■□□□□ 0.5
CDC42-203ENST00000400259 PFKFB1P16118 471 aa18.18■□□□□ 0.5
CDC42-203ENST00000400259 IFIT1BQ5T764 474 aaKnown RBP18.18■□□□□ 0.5
CDC42-203ENST00000400259 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.18■□□□□ 0.5
CDC42-203ENST00000400259 PLA2G4DQ86XP0 818 aa18.18■□□□□ 0.5
CDC42-203ENST00000400259 DZIP1Q86YF9 867 aaKnown RBP18.18■□□□□ 0.5
CDC42-203ENST00000400259 SDF4Q9BRK5 362 aa18.18■□□□□ 0.5
CDC42-203ENST00000400259 GOLGA6L6A8MZA4 724 aa18.18■□□□□ 0.5
CDC42-203ENST00000400259 ZNF202O95125 648 aa18.18■□□□□ 0.5
CDC42-203ENST00000400259 SLC3A2P08195 630 aaKnown RBP18.18■□□□□ 0.5
CDC42-203ENST00000400259 KIAA2012Q0VF49 1180 aa18.18■□□□□ 0.5
CDC42-203ENST00000400259 FUT2Q10981 343 aa18.18■□□□□ 0.5
CDC42-203ENST00000400259 SARM1Q6SZW1 724 aa18.18■□□□□ 0.5
CDC42-203ENST00000400259 CATIPQ7Z7H3 387 aa18.18■□□□□ 0.5
CDC42-203ENST00000400259 KIAA1468Q9P260 1216 aa18.18■□□□□ 0.5
CDC42-203ENST00000400259 TROAPQ12815 778 aa18.17■□□□□ 0.5
CDC42-203ENST00000400259 ZNF804AQ7Z570 1209 aa18.17■□□□□ 0.5
CDC42-203ENST00000400259 DIS3L2Q8IYB7 885 aaKnown RBP18.17■□□□□ 0.5
CDC42-203ENST00000400259 MKRN1Q9UHC7 482 aaKnown RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms