RNA–Protein interactions for RNA: ENST00000399975.7

USP16-203, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene USP16, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-203ENST00000399975 JAKMIP1Q96N16 626 aaKnown RBP8.11□□□□□ -1.11
USP16-203ENST00000399975 CYP46A1Q9Y6A2 500 aa8.11□□□□□ -1.11
USP16-203ENST00000399975 NOVP48745 357 aa8.1□□□□□ -1.11
USP16-203ENST00000399975 EVCP57679 992 aa8.1□□□□□ -1.11
USP16-203ENST00000399975 PDE4BQ07343 736 aa8.1□□□□□ -1.11
USP16-203ENST00000399975 NFIAQ12857 509 aa8.1□□□□□ -1.11
USP16-203ENST00000399975 CCDC178Q5BJE1 867 aa8.1□□□□□ -1.11
USP16-203ENST00000399975 MFSD6Q6ZSS7 791 aa8.1□□□□□ -1.11
USP16-203ENST00000399975 SH3BP5LQ7L8J4 393 aa8.1□□□□□ -1.11
USP16-203ENST00000399975 ANKS1AQ92625 1134 aa8.1□□□□□ -1.11
USP16-203ENST00000399975 HACL1Q9UJ83 578 aa8.1□□□□□ -1.11
USP16-203ENST00000399975 IQCA1LA6NCM1 817 aa8.1□□□□□ -1.11
USP16-203ENST00000399975 POLR3DP05423 398 aaPredicted RBP8.1□□□□□ -1.11
USP16-203ENST00000399975 HLA-DOAP06340 250 aa8.1□□□□□ -1.11
USP16-203ENST00000399975 ANKRD1Q15327 319 aa8.1□□□□□ -1.11
USP16-203ENST00000399975 NBPF9Q3BBW0 867 aa8.1□□□□□ -1.11
USP16-203ENST00000399975 BLOC1S2Q6QNY1 142 aa8.1□□□□□ -1.11
USP16-203ENST00000399975 PI4KBQ9UBF8 816 aa8.1□□□□□ -1.11
USP16-203ENST00000399975 NEDD4P46934 1319 aa8.1□□□□□ -1.11
USP16-203ENST00000399975 NID2Q14112 1375 aa8.1□□□□□ -1.11
USP16-203ENST00000399975 POTECB2RU33 542 aa8.1□□□□□ -1.11
USP16-203ENST00000399975 ST18O60284 1047 aa8.1□□□□□ -1.11
USP16-203ENST00000399975 CYP2D6P10635 497 aa8.1□□□□□ -1.11
USP16-203ENST00000399975 MCM5P33992 734 aa8.1□□□□□ -1.11
USP16-203ENST00000399975 EPS15P42566 896 aa8.1□□□□□ -1.11
USP16-203ENST00000399975 PLCD1P51178 756 aa8.1□□□□□ -1.11
USP16-203ENST00000399975 HIRAP54198 1017 aaPredicted RBP8.1□□□□□ -1.11
USP16-203ENST00000399975 CTDSPL2Q05D32 466 aa8.1□□□□□ -1.11
USP16-203ENST00000399975 TATDN1Q6P1N9 297 aa8.1□□□□□ -1.11
USP16-203ENST00000399975 TRPM4Q8TD43 1214 aa8.1□□□□□ -1.11
USP16-203ENST00000399975 TMEM87BQ96K49 555 aa8.1□□□□□ -1.11
USP16-203ENST00000399975 GINM1Q9NU53 330 aa8.1□□□□□ -1.11
USP16-203ENST00000399975 HERC5Q9UII4 1024 aaKnown RBP8.1□□□□□ -1.11
USP16-203ENST00000399975 ATAD5Q96QE3 1844 aa8.09□□□□□ -1.11
USP16-203ENST00000399975 CASTP20810 708 aaKnown RBP8.09□□□□□ -1.11
USP16-203ENST00000399975 TRDNQ13061 729 aa8.09□□□□□ -1.11
USP16-203ENST00000399975 SAMD7Q7Z3H4 446 aa8.09□□□□□ -1.11
USP16-203ENST00000399975 ESR2Q92731 530 aa8.09□□□□□ -1.11
USP16-203ENST00000399975 HOOK2Q96ED9 719 aa8.09□□□□□ -1.11
USP16-203ENST00000399975 PDRG1Q9NUG6 133 aa8.09□□□□□ -1.11
USP16-203ENST00000399975 MINDY4BA8MYZ0 360 aa8.09□□□□□ -1.11
USP16-203ENST00000399975 EGFRP00533 1210 aa8.09□□□□□ -1.11
USP16-203ENST00000399975 CDK8P49336 464 aa8.09□□□□□ -1.11
USP16-203ENST00000399975 RCAN1P53805 252 aa8.09□□□□□ -1.11
USP16-203ENST00000399975 ANTXR2P58335 489 aa8.09□□□□□ -1.11
USP16-203ENST00000399975 HAND2P61296 217 aa8.09□□□□□ -1.11
USP16-203ENST00000399975 ZFPM1Q8IX07 1006 aa8.09□□□□□ -1.11
USP16-203ENST00000399975 TEPSINQ96N21 525 aa8.09□□□□□ -1.11
USP16-203ENST00000399975 SERPINB13Q9UIV8 391 aa8.09□□□□□ -1.11
USP16-203ENST00000399975 CYP2D7A0A087X1C5 515 aa8.08□□□□□ -1.12
USP16-203ENST00000399975 IGKV6D-41A0A0C4DH26 115 aa8.08□□□□□ -1.12
USP16-203ENST00000399975 DDTLA6NHG4 134 aaPredicted RBP8.08□□□□□ -1.12
USP16-203ENST00000399975 RASA1P20936 1047 aa8.08□□□□□ -1.12
USP16-203ENST00000399975 LIFRP42702 1097 aa8.08□□□□□ -1.12
USP16-203ENST00000399975 PICALMQ13492 652 aa8.08□□□□□ -1.12
USP16-203ENST00000399975 TBC1D10BQ4KMP7 808 aaPredicted RBP8.08□□□□□ -1.12
USP16-203ENST00000399975 PPP4R3BQ5MIZ7 849 aa8.08□□□□□ -1.12
USP16-203ENST00000399975 RALYLQ86SE5 291 aaKnown RBP8.08□□□□□ -1.12
USP16-203ENST00000399975 PNMA8AQ86V59 439 aaPredicted RBP8.08□□□□□ -1.12
USP16-203ENST00000399975 CCDC17Q96LX7 622 aa8.08□□□□□ -1.12
USP16-203ENST00000399975 TAF1DQ9H5J8 278 aaPredicted RBP8.08□□□□□ -1.12
USP16-203ENST00000399975 SAP30BPQ9UHR5 308 aaKnown RBP8.08□□□□□ -1.12
USP16-203ENST00000399975 DOCK1Q14185 1865 aa8.08□□□□□ -1.12
USP16-203ENST00000399975 SHMT1P34896 483 aa8.08□□□□□ -1.12
USP16-203ENST00000399975 EPHX2P34913 555 aa8.08□□□□□ -1.12
USP16-203ENST00000399975 NEK4P51957 841 aa8.08□□□□□ -1.12
USP16-203ENST00000399975 TOB2Q14106 344 aaPredicted RBP8.08□□□□□ -1.12
USP16-203ENST00000399975 CYB5R4Q7L1T6 521 aa8.08□□□□□ -1.12
USP16-203ENST00000399975 NEDD1Q8NHV4 660 aa8.08□□□□□ -1.12
USP16-203ENST00000399975 IGDCC4Q8TDY8 1250 aa8.08□□□□□ -1.12
USP16-203ENST00000399975 ZSCAN31Q96LW9 406 aaPredicted RBP8.08□□□□□ -1.12
USP16-203ENST00000399975 ZSWIM5Q9P217 1185 aa8.08□□□□□ -1.12
USP16-203ENST00000399975 SYNPO2Q9UMS6 1093 aa8.08□□□□□ -1.12
USP16-203ENST00000399975 CLRN2A0PK11 232 aa8.07□□□□□ -1.12
USP16-203ENST00000399975 SH2B2O14492 632 aaPredicted RBP8.07□□□□□ -1.12
USP16-203ENST00000399975 SEC23AQ15436 765 aa8.07□□□□□ -1.12
USP16-203ENST00000399975 SGMS1Q86VZ5 419 aa8.07□□□□□ -1.12
USP16-203ENST00000399975 TMTC2Q8N394 836 aa8.07□□□□□ -1.12
USP16-203ENST00000399975 TCP10L2B9ZVM9 353 aa8.07□□□□□ -1.12
USP16-203ENST00000399975 PRC1O43663 620 aa8.07□□□□□ -1.12
USP16-203ENST00000399975 BECN1Q14457 450 aa8.07□□□□□ -1.12
USP16-203ENST00000399975 ZNF274Q96GC6 653 aaPredicted RBP8.07□□□□□ -1.12
USP16-203ENST00000399975 DNAJC18Q9H819 358 aa8.07□□□□□ -1.12
USP16-203ENST00000399975 ZNF112Q9UJU3 913 aa8.07□□□□□ -1.12
USP16-203ENST00000399975 POLR2AP24928 1970 aaKnown RBP8.07□□□□□ -1.12
USP16-203ENST00000399975 B4E1Z4 1266 aa8.07□□□□□ -1.12
USP16-203ENST00000399975 SMIM22K7EJ46 135 aa8.07□□□□□ -1.12
USP16-203ENST00000399975 CACNB3P54284 484 aa8.07□□□□□ -1.12
USP16-203ENST00000399975 AK2P54819 239 aa8.07□□□□□ -1.12
USP16-203ENST00000399975 EVX2Q03828 476 aa8.07□□□□□ -1.12
USP16-203ENST00000399975 CUL4AQ13619 759 aa8.07□□□□□ -1.12
USP16-203ENST00000399975 RASA3Q14644 834 aa8.07□□□□□ -1.12
USP16-203ENST00000399975 ANGEL2Q5VTE6 544 aaKnown RBP8.07□□□□□ -1.12
USP16-203ENST00000399975 DGKHQ86XP1 1220 aa8.07□□□□□ -1.12
USP16-203ENST00000399975 NKX2-3Q8TAU0 364 aa8.07□□□□□ -1.12
USP16-203ENST00000399975 CHMP4CQ96CF2 233 aa8.07□□□□□ -1.12
USP16-203ENST00000399975 DYNLL2Q96FJ2 89 aa8.07□□□□□ -1.12
USP16-203ENST00000399975 MAP3K14Q99558 947 aa8.07□□□□□ -1.12
USP16-203ENST00000399975 SH2B1Q9NRF2 756 aaPredicted RBP8.07□□□□□ -1.12
USP16-203ENST00000399975 LIMCH1Q9UPQ0 1083 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms