RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 PTF1AQ7RTS3 328 aa20.49■□□□□ 0.87
HLA-DQB1-204ENST00000399084 CEP57L1Q8IYX8 460 aa20.49■□□□□ 0.87
HLA-DQB1-204ENST00000399084 NKX2-3Q8TAU0 364 aa20.49■□□□□ 0.87
HLA-DQB1-204ENST00000399084 PHKBQ93100 1093 aa20.49■□□□□ 0.87
HLA-DQB1-204ENST00000399084 ARPP21Q9UBL0 812 aaPredicted RBP20.49■□□□□ 0.87
HLA-DQB1-204ENST00000399084 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.49■□□□□ 0.87
HLA-DQB1-204ENST00000399084 CUTAO60888 179 aa20.48■□□□□ 0.87
HLA-DQB1-204ENST00000399084 MMP1P03956 469 aa20.48■□□□□ 0.87
HLA-DQB1-204ENST00000399084 GSTO1P78417 241 aa20.48■□□□□ 0.87
HLA-DQB1-204ENST00000399084 MECOMQ03112 1051 aa20.48■□□□□ 0.87
HLA-DQB1-204ENST00000399084 SLC27A3Q5K4L6 730 aa20.48■□□□□ 0.87
HLA-DQB1-204ENST00000399084 CATIPQ7Z7H3 387 aa20.48■□□□□ 0.87
HLA-DQB1-204ENST00000399084 LUZP1Q86V48 1076 aa20.48■□□□□ 0.87
HLA-DQB1-204ENST00000399084 NOSTRINQ8IVI9 506 aa20.48■□□□□ 0.87
HLA-DQB1-204ENST00000399084 BPIFA3Q9BQP9 254 aa20.48■□□□□ 0.87
HLA-DQB1-204ENST00000399084 INCENPQ9NQS7 918 aa20.48■□□□□ 0.87
HLA-DQB1-204ENST00000399084 SBF2Q86WG5 1849 aa20.48■□□□□ 0.87
HLA-DQB1-204ENST00000399084 IRS2Q9Y4H2 1338 aa20.48■□□□□ 0.87
HLA-DQB1-204ENST00000399084 PPFIA3O75145 1194 aa20.47■□□□□ 0.87
HLA-DQB1-204ENST00000399084 DDAH1O94760 285 aa20.47■□□□□ 0.87
HLA-DQB1-204ENST00000399084 AKAP17AQ02040 695 aaKnown RBP20.47■□□□□ 0.87
HLA-DQB1-204ENST00000399084 CCDC178Q5BJE1 867 aa20.47■□□□□ 0.87
HLA-DQB1-204ENST00000399084 MEX3CQ5U5Q3 659 aaKnown RBP20.47■□□□□ 0.87
HLA-DQB1-204ENST00000399084 NBPF11Q86T75 865 aa20.47■□□□□ 0.87
HLA-DQB1-204ENST00000399084 RAB11FIP4Q86YS3 637 aa20.47■□□□□ 0.87
HLA-DQB1-204ENST00000399084 SDR42E1Q8WUS8 393 aa20.47■□□□□ 0.87
HLA-DQB1-204ENST00000399084 PIBF1Q8WXW3 757 aa20.47■□□□□ 0.87
HLA-DQB1-204ENST00000399084 KIAA1468Q9P260 1216 aa20.47■□□□□ 0.87
HLA-DQB1-204ENST00000399084 MAST2Q6P0Q8 1798 aa20.47■□□□□ 0.87
HLA-DQB1-204ENST00000399084 TNKSO95271 1327 aa20.47■□□□□ 0.87
HLA-DQB1-204ENST00000399084 XDHP47989 1333 aa20.47■□□□□ 0.87
HLA-DQB1-204ENST00000399084 PLCB2Q00722 1185 aa20.47■□□□□ 0.87
HLA-DQB1-204ENST00000399084 IQCB1Q15051 598 aa20.47■□□□□ 0.87
HLA-DQB1-204ENST00000399084 PTPAQ15257 358 aa20.47■□□□□ 0.87
HLA-DQB1-204ENST00000399084 CTR9Q6PD62 1173 aa20.47■□□□□ 0.87
HLA-DQB1-204ENST00000399084 CNBD1Q8NA66 436 aa20.47■□□□□ 0.87
HLA-DQB1-204ENST00000399084 MAP3K14Q99558 947 aa20.47■□□□□ 0.87
HLA-DQB1-204ENST00000399084 DNAJC25Q9H1X3 360 aa20.47■□□□□ 0.87
HLA-DQB1-204ENST00000399084 CEP131Q9UPN4 1083 aa20.47■□□□□ 0.87
HLA-DQB1-204ENST00000399084 MYH13Q9UKX3 1938 aa20.46■□□□□ 0.87
HLA-DQB1-204ENST00000399084 KIAA1551Q9HCM1 1747 aa20.46■□□□□ 0.87
HLA-DQB1-204ENST00000399084 ZNF202O95125 648 aa20.46■□□□□ 0.87
HLA-DQB1-204ENST00000399084 LDHCP07864 332 aa20.46■□□□□ 0.87
HLA-DQB1-204ENST00000399084 RXRAP19793 462 aa20.46■□□□□ 0.87
HLA-DQB1-204ENST00000399084 NDUFA8P51970 172 aa20.46■□□□□ 0.87
HLA-DQB1-204ENST00000399084 PDE4BQ07343 736 aa20.46■□□□□ 0.87
HLA-DQB1-204ENST00000399084 PLA2G4DQ86XP0 818 aa20.46■□□□□ 0.87
HLA-DQB1-204ENST00000399084 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.46■□□□□ 0.87
HLA-DQB1-204ENST00000399084 BECN2A8MW95 431 aa20.45■□□□□ 0.86
HLA-DQB1-204ENST00000399084 PRPF3O43395 683 aaKnown RBP20.45■□□□□ 0.86
HLA-DQB1-204ENST00000399084 TPM2P07951 284 aa20.45■□□□□ 0.86
HLA-DQB1-204ENST00000399084 DHX8Q14562 1220 aaKnown RBP20.45■□□□□ 0.86
HLA-DQB1-204ENST00000399084 NFIXQ14938 502 aa20.45■□□□□ 0.86
HLA-DQB1-204ENST00000399084 IFIT1BQ5T764 474 aaKnown RBP20.45■□□□□ 0.86
HLA-DQB1-204ENST00000399084 ZNF384Q8TF68 577 aa20.45■□□□□ 0.86
HLA-DQB1-204ENST00000399084 NAP1L5Q96NT1 182 aaPredicted RBP20.45■□□□□ 0.86
HLA-DQB1-204ENST00000399084 HPSEQ9Y251 543 aa20.45■□□□□ 0.86
HLA-DQB1-204ENST00000399084 DUOX1Q9NRD9 1551 aa20.45■□□□□ 0.86
HLA-DQB1-204ENST00000399084 CCDC88AQ3V6T2 1871 aa20.45■□□□□ 0.86
HLA-DQB1-204ENST00000399084 TAF1P21675 1872 aa20.45■□□□□ 0.86
HLA-DQB1-204ENST00000399084 A0A1B0GVL5 298 aa20.44■□□□□ 0.86
HLA-DQB1-204ENST00000399084 ZNF75DP51815 510 aa20.44■□□□□ 0.86
HLA-DQB1-204ENST00000399084 FAM196AQ6ZSG2 479 aa20.44■□□□□ 0.86
HLA-DQB1-204ENST00000399084 ZNF804AQ7Z570 1209 aa20.44■□□□□ 0.86
HLA-DQB1-204ENST00000399084 CCDC144CPQ8IYA2 1237 aa20.44■□□□□ 0.86
HLA-DQB1-204ENST00000399084 MRFAP1L1Q96HT8 127 aa20.44■□□□□ 0.86
HLA-DQB1-204ENST00000399084 AIFM3Q96NN9 605 aa20.44■□□□□ 0.86
HLA-DQB1-204ENST00000399084 TRIM5Q9C035 493 aa20.44■□□□□ 0.86
HLA-DQB1-204ENST00000399084 DCP1AQ9NPI6 582 aaPredicted RBP20.44■□□□□ 0.86
HLA-DQB1-204ENST00000399084 USP17L12C9JPN9 530 aa20.44■□□□□ 0.86
HLA-DQB1-204ENST00000399084 USP17L21D6R901 530 aa20.44■□□□□ 0.86
HLA-DQB1-204ENST00000399084 AP5Z1O43299 807 aa20.44■□□□□ 0.86
HLA-DQB1-204ENST00000399084 BMP15O95972 392 aa20.44■□□□□ 0.86
HLA-DQB1-204ENST00000399084 PPP4CP60510 307 aa20.44■□□□□ 0.86
HLA-DQB1-204ENST00000399084 TMC4Q7Z404 712 aa20.44■□□□□ 0.86
HLA-DQB1-204ENST00000399084 ENAHQ8N8S7 591 aaPredicted RBP20.44■□□□□ 0.86
HLA-DQB1-204ENST00000399084 ZNF579Q8NAF0 562 aaKnown RBP20.44■□□□□ 0.86
HLA-DQB1-204ENST00000399084 MYL10Q9BUA6 226 aa20.44■□□□□ 0.86
HLA-DQB1-204ENST00000399084 GJB4Q9NTQ9 266 aa20.44■□□□□ 0.86
HLA-DQB1-204ENST00000399084 RGS17Q9UGC6 210 aaPredicted RBP20.44■□□□□ 0.86
HLA-DQB1-204ENST00000399084 HOOK1Q9UJC3 728 aaKnown RBP20.44■□□□□ 0.86
HLA-DQB1-204ENST00000399084 BAG3O95817 575 aa20.43■□□□□ 0.86
HLA-DQB1-204ENST00000399084 DYNLL1P63167 89 aaKnown RBP20.43■□□□□ 0.86
HLA-DQB1-204ENST00000399084 CRY2Q49AN0 593 aa20.43■□□□□ 0.86
HLA-DQB1-204ENST00000399084 RESP18Q5W5W9 173 aa20.43■□□□□ 0.86
HLA-DQB1-204ENST00000399084 DZIP1Q86YF9 867 aaKnown RBP20.43■□□□□ 0.86
HLA-DQB1-204ENST00000399084 ANKIB1Q9P2G1 1089 aa20.43■□□□□ 0.86
HLA-DQB1-204ENST00000399084 AFF2P51816 1311 aa20.43■□□□□ 0.86
HLA-DQB1-204ENST00000399084 BBOX1O75936 387 aa20.42■□□□□ 0.86
HLA-DQB1-204ENST00000399084 PFKFB1P16118 471 aa20.42■□□□□ 0.86
HLA-DQB1-204ENST00000399084 ATP2B4P23634 1241 aa20.42■□□□□ 0.86
HLA-DQB1-204ENST00000399084 SYKP43405 635 aa20.42■□□□□ 0.86
HLA-DQB1-204ENST00000399084 ST5P78524 1137 aa20.42■□□□□ 0.86
HLA-DQB1-204ENST00000399084 AMOTL1Q8IY63 956 aa20.42■□□□□ 0.86
HLA-DQB1-204ENST00000399084 DIS3L2Q8IYB7 885 aaKnown RBP20.42■□□□□ 0.86
HLA-DQB1-204ENST00000399084 SEPT12Q8IYM1 358 aa20.42■□□□□ 0.86
HLA-DQB1-204ENST00000399084 KRI1Q8N9T8 703 aaKnown RBP20.42■□□□□ 0.86
HLA-DQB1-204ENST00000399084 ZKSCAN3Q9BRR0 538 aa20.42■□□□□ 0.86
HLA-DQB1-204ENST00000399084 WTIPA6NIX2 430 aaPredicted RBP20.41■□□□□ 0.86
HLA-DQB1-204ENST00000399084 NEMFO60524 1076 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms