RNA–Protein interactions for RNA: ENST00000397885.2

PUM3-202, Transcript of pumilio RNA binding family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUM3, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM3-202ENST00000397885 MEGF6O75095 1541 aa13.08□□□□□ -0.32
PUM3-202ENST00000397885 SHANK3Q9BYB0 1731 aa13.08□□□□□ -0.32
PUM3-202ENST00000397885 A0A087WWV3 80 aa13.07□□□□□ -0.32
PUM3-202ENST00000397885 LMOD1P29536 600 aaPredicted RBP13.07□□□□□ -0.32
PUM3-202ENST00000397885 ME1P48163 572 aa13.07□□□□□ -0.32
PUM3-202ENST00000397885 BIRC2Q13490 618 aa13.07□□□□□ -0.32
PUM3-202ENST00000397885 KRT32Q14532 448 aa13.07□□□□□ -0.32
PUM3-202ENST00000397885 TAF7Q15545 349 aaPredicted RBP13.07□□□□□ -0.32
PUM3-202ENST00000397885 ANKRD18AQ8IVF6 992 aa13.07□□□□□ -0.32
PUM3-202ENST00000397885 USP28Q96RU2 1077 aa13.07□□□□□ -0.32
PUM3-202ENST00000397885 PAGR1Q9BTK6 254 aa13.07□□□□□ -0.32
PUM3-202ENST00000397885 ODF2LQ9ULJ1 636 aa13.07□□□□□ -0.32
PUM3-202ENST00000397885 A0A1B0GUA9 196 aa13.07□□□□□ -0.32
PUM3-202ENST00000397885 IRF6O14896 467 aa13.07□□□□□ -0.32
PUM3-202ENST00000397885 EIF3HO15372 352 aaKnown RBP eCLIP13.07□□□□□ -0.32
PUM3-202ENST00000397885 SURF6O75683 361 aaKnown RBP13.07□□□□□ -0.32
PUM3-202ENST00000397885 NEBLO76041 1014 aa13.07□□□□□ -0.32
PUM3-202ENST00000397885 HDGFL1Q5TGJ6 251 aa13.07□□□□□ -0.32
PUM3-202ENST00000397885 WWC2Q6AWC2 1192 aa13.07□□□□□ -0.32
PUM3-202ENST00000397885 CCDC50Q8IVM0 306 aa13.07□□□□□ -0.32
PUM3-202ENST00000397885 USHBP1Q8N6Y0 703 aa13.07□□□□□ -0.32
PUM3-202ENST00000397885 NECTIN2Q92692 538 aa13.07□□□□□ -0.32
PUM3-202ENST00000397885 EVI5LQ96CN4 794 aa13.07□□□□□ -0.32
PUM3-202ENST00000397885 PUF60Q9UHX1 559 aaKnown RBP13.07□□□□□ -0.32
PUM3-202ENST00000397885 CAPN7Q9Y6W3 813 aa13.07□□□□□ -0.32
PUM3-202ENST00000397885 NEDD4P46934 1319 aa13.07□□□□□ -0.32
PUM3-202ENST00000397885 KIAA0754O94854 1291 aa13.06□□□□□ -0.32
PUM3-202ENST00000397885 ICA1Q05084 483 aa13.06□□□□□ -0.32
PUM3-202ENST00000397885 TOGARAM2Q6ZUX3 1019 aa13.06□□□□□ -0.32
PUM3-202ENST00000397885 NAA15Q9BXJ9 866 aaKnown RBP13.06□□□□□ -0.32
PUM3-202ENST00000397885 RTEL1Q9NZ71 1219 aa13.06□□□□□ -0.32
PUM3-202ENST00000397885 HPCAL4Q9UM19 191 aa13.06□□□□□ -0.32
PUM3-202ENST00000397885 KAT6BQ8WYB5 2073 aa13.06□□□□□ -0.32
PUM3-202ENST00000397885 CTAGE9A4FU28 777 aa13.06□□□□□ -0.32
PUM3-202ENST00000397885 SMTNP53814 917 aa13.06□□□□□ -0.32
PUM3-202ENST00000397885 MICALCLQ6ZW33 695 aa13.06□□□□□ -0.32
PUM3-202ENST00000397885 IQCA1Q86XH1 822 aa13.06□□□□□ -0.32
PUM3-202ENST00000397885 BCAS4Q8TDM0 211 aa13.06□□□□□ -0.32
PUM3-202ENST00000397885 KAT14Q9H8E8 782 aa13.06□□□□□ -0.32
PUM3-202ENST00000397885 STK32BQ9NY57 414 aa13.06□□□□□ -0.32
PUM3-202ENST00000397885 JAK2O60674 1132 aa13.05□□□□□ -0.32
PUM3-202ENST00000397885 RTN2O75298 545 aa13.05□□□□□ -0.32
PUM3-202ENST00000397885 ATP1A3P13637 1013 aa13.05□□□□□ -0.32
PUM3-202ENST00000397885 CEBPZQ03701 1054 aaKnown RBP13.05□□□□□ -0.32
PUM3-202ENST00000397885 GRIK3Q13003 919 aa13.05□□□□□ -0.32
PUM3-202ENST00000397885 ISM2Q6H9L7 571 aa13.05□□□□□ -0.32
PUM3-202ENST00000397885 PPP1R42Q7Z4L9 355 aa13.05□□□□□ -0.32
PUM3-202ENST00000397885 OTUD6BQ8N6M0 293 aa13.05□□□□□ -0.32
PUM3-202ENST00000397885 TC2NQ8N9U0 490 aa13.05□□□□□ -0.32
PUM3-202ENST00000397885 COG1Q8WTW3 980 aa13.05□□□□□ -0.32
PUM3-202ENST00000397885 ZSWIM4Q9H7M6 989 aa13.05□□□□□ -0.32
PUM3-202ENST00000397885 MYO1AQ9UBC5 1043 aa13.05□□□□□ -0.32
PUM3-202ENST00000397885 PCDHA7Q9UN72 937 aa13.05□□□□□ -0.32
PUM3-202ENST00000397885 ZC3H4Q9UPT8 1303 aaKnown RBP13.05□□□□□ -0.32
PUM3-202ENST00000397885 DOT1LQ8TEK3 1739 aa13.05□□□□□ -0.32
PUM3-202ENST00000397885 MEFVO15553 781 aaPredicted RBP13.05□□□□□ -0.32
PUM3-202ENST00000397885 PFKFB2O60825 505 aa13.05□□□□□ -0.32
PUM3-202ENST00000397885 CCDC148Q8NFR7 591 aa13.05□□□□□ -0.32
PUM3-202ENST00000397885 KCNG4Q8TDN1 519 aa13.05□□□□□ -0.32
PUM3-202ENST00000397885 DPF2Q92785 391 aa13.05□□□□□ -0.32
PUM3-202ENST00000397885 GPATCH3Q96I76 525 aa13.05□□□□□ -0.32
PUM3-202ENST00000397885 FMNL2Q96PY5 1086 aa13.05□□□□□ -0.32
PUM3-202ENST00000397885 CAPS2Q9BXY5 557 aa13.05□□□□□ -0.32
PUM3-202ENST00000397885 NCAPD2Q15021 1401 aa13.04□□□□□ -0.32
PUM3-202ENST00000397885 TARSL2A2RTX5 802 aaKnown RBP13.04□□□□□ -0.32
PUM3-202ENST00000397885 ZEB2O60315 1214 aa13.04□□□□□ -0.32
PUM3-202ENST00000397885 NDUFA8P51970 172 aa13.04□□□□□ -0.32
PUM3-202ENST00000397885 STIM1Q13586 685 aa13.04□□□□□ -0.32
PUM3-202ENST00000397885 SPECC1LQ69YQ0 1117 aa13.04□□□□□ -0.32
PUM3-202ENST00000397885 PANX2Q96RD6 677 aa13.04□□□□□ -0.32
PUM3-202ENST00000397885 TUBE1Q9UJT0 475 aa13.04□□□□□ -0.32
PUM3-202ENST00000397885 GGA2Q9UJY4 613 aa13.04□□□□□ -0.32
PUM3-202ENST00000397885 PCDH11XQ9BZA7 1347 aa13.04□□□□□ -0.32
PUM3-202ENST00000397885 PCDH11YQ9BZA8 1340 aa13.04□□□□□ -0.32
PUM3-202ENST00000397885 GOLGA6CA6NDK9 693 aa13.04□□□□□ -0.32
PUM3-202ENST00000397885 RHOXF2BP0C7M4 288 aa13.04□□□□□ -0.32
PUM3-202ENST00000397885 GOLGA6DP0CG33 693 aa13.04□□□□□ -0.32
PUM3-202ENST00000397885 DRP2Q13474 957 aa13.04□□□□□ -0.32
PUM3-202ENST00000397885 FBXW7Q969H0 707 aa13.04□□□□□ -0.32
PUM3-202ENST00000397885 RHOXF2Q9BQY4 288 aa13.04□□□□□ -0.32
PUM3-202ENST00000397885 GOLGA6AQ9NYA3 693 aa13.04□□□□□ -0.32
PUM3-202ENST00000397885 YEATS4O95619 227 aa13.03□□□□□ -0.32
PUM3-202ENST00000397885 HOXB7P09629 217 aa13.03□□□□□ -0.32
PUM3-202ENST00000397885 SLC8A3P57103 927 aa13.03□□□□□ -0.32
PUM3-202ENST00000397885 ADCY2Q08462 1091 aa13.03□□□□□ -0.32
PUM3-202ENST00000397885 SLC15A2Q16348 729 aa13.03□□□□□ -0.32
PUM3-202ENST00000397885 NAIF1Q69YI7 327 aaPredicted RBP13.03□□□□□ -0.32
PUM3-202ENST00000397885 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.03□□□□□ -0.32
PUM3-202ENST00000397885 ARMC2Q8NEN0 867 aa13.03□□□□□ -0.32
PUM3-202ENST00000397885 ITFG2Q969R8 447 aa13.03□□□□□ -0.32
PUM3-202ENST00000397885 FAM210AQ96ND0 272 aa13.03□□□□□ -0.32
PUM3-202ENST00000397885 SH3GL3Q99963 347 aa13.03□□□□□ -0.32
PUM3-202ENST00000397885 NBPF3Q9H094 633 aa13.03□□□□□ -0.32
PUM3-202ENST00000397885 SPON1Q9HCB6 807 aa13.03□□□□□ -0.32
PUM3-202ENST00000397885 KLC4Q9NSK0 619 aa13.03□□□□□ -0.32
PUM3-202ENST00000397885 ECHDC1Q9NTX5 307 aa13.03□□□□□ -0.32
PUM3-202ENST00000397885 RASSF9O75901 435 aa13.02□□□□□ -0.32
PUM3-202ENST00000397885 PAX7P23759 505 aa13.02□□□□□ -0.32
PUM3-202ENST00000397885 INHBEP58166 350 aa13.02□□□□□ -0.32
PUM3-202ENST00000397885 STK3Q13188 491 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms