RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 DPF2Q92785 391 aa22.97■■□□□ 1.27
PDLIM2-205ENST00000397761 OSBPL5Q9H0X9 879 aaPredicted RBP22.97■■□□□ 1.27
PDLIM2-205ENST00000397761 SH2B2O14492 632 aaPredicted RBP22.96■■□□□ 1.27
PDLIM2-205ENST00000397761 POLR3DP05423 398 aaPredicted RBP22.96■■□□□ 1.27
PDLIM2-205ENST00000397761 HSP90AA1P07900 732 aaKnown RBP22.96■■□□□ 1.27
PDLIM2-205ENST00000397761 NFIAQ12857 509 aa22.96■■□□□ 1.27
PDLIM2-205ENST00000397761 SPRYD3Q8NCJ5 442 aa22.96■■□□□ 1.27
PDLIM2-205ENST00000397761 IGDCC4Q8TDY8 1250 aa22.96■■□□□ 1.27
PDLIM2-205ENST00000397761 SAP30BPQ9UHR5 308 aaKnown RBP22.96■■□□□ 1.27
PDLIM2-205ENST00000397761 ANGEL1Q9UNK9 670 aaKnown RBP22.96■■□□□ 1.27
PDLIM2-205ENST00000397761 GREB1LQ9C091 1923 aaPredicted RBP22.96■■□□□ 1.27
PDLIM2-205ENST00000397761 FGD1P98174 961 aa22.95■■□□□ 1.26
PDLIM2-205ENST00000397761 ST3GAL1Q11201 340 aa22.95■■□□□ 1.26
PDLIM2-205ENST00000397761 ZNF274Q96GC6 653 aaPredicted RBP22.95■■□□□ 1.26
PDLIM2-205ENST00000397761 FAM198AQ9UFP1 575 aa22.95■■□□□ 1.26
PDLIM2-205ENST00000397761 TAOK2Q9UL54 1235 aa22.95■■□□□ 1.26
PDLIM2-205ENST00000397761 ZNF541Q9H0D2 1346 aa22.95■■□□□ 1.26
PDLIM2-205ENST00000397761 LIFRP42702 1097 aa22.94■■□□□ 1.26
PDLIM2-205ENST00000397761 PICALMQ13492 652 aa22.94■■□□□ 1.26
PDLIM2-205ENST00000397761 DLGAP5Q15398 846 aa22.94■■□□□ 1.26
PDLIM2-205ENST00000397761 C16orf86Q6ZW13 317 aa22.94■■□□□ 1.26
PDLIM2-205ENST00000397761 TTC6Q86TZ1 520 aa22.94■■□□□ 1.26
PDLIM2-205ENST00000397761 SGMS1Q86VZ5 419 aa22.94■■□□□ 1.26
PDLIM2-205ENST00000397761 SLKQ9H2G2 1235 aaPredicted RBP22.94■■□□□ 1.26
PDLIM2-205ENST00000397761 GPHNQ9NQX3 736 aaPredicted RBP22.94■■□□□ 1.26
PDLIM2-205ENST00000397761 ATRNL1Q5VV63 1379 aa22.94■■□□□ 1.26
PDLIM2-205ENST00000397761 GRIN3BO60391 1043 aa22.93■■□□□ 1.26
PDLIM2-205ENST00000397761 PFKFB2O60825 505 aa22.93■■□□□ 1.26
PDLIM2-205ENST00000397761 ENTPD3O75355 529 aa22.93■■□□□ 1.26
PDLIM2-205ENST00000397761 GABPAQ06546 454 aa22.93■■□□□ 1.26
PDLIM2-205ENST00000397761 APOBRQ0VD83 1088 aa22.93■■□□□ 1.26
PDLIM2-205ENST00000397761 SPDYE2Q495Y8 402 aa22.93■■□□□ 1.26
PDLIM2-205ENST00000397761 RRP12Q5JTH9 1297 aaKnown RBP22.93■■□□□ 1.26
PDLIM2-205ENST00000397761 FKBP1CQ5VVH2 108 aa22.93■■□□□ 1.26
PDLIM2-205ENST00000397761 TDRD3Q9H7E2 651 aaKnown RBP22.93■■□□□ 1.26
PDLIM2-205ENST00000397761 CWC22Q9HCG8 908 aaKnown RBP22.93■■□□□ 1.26
PDLIM2-205ENST00000397761 CIZ1Q9ULV3 898 aaPredicted RBP22.93■■□□□ 1.26
PDLIM2-205ENST00000397761 STK11IPQ8N1F8 1099 aa22.92■■□□□ 1.26
PDLIM2-205ENST00000397761 GTF3C6Q969F1 213 aa22.92■■□□□ 1.26
PDLIM2-205ENST00000397761 DYNLL2Q96FJ2 89 aa22.92■■□□□ 1.26
PDLIM2-205ENST00000397761 EHD4Q9H223 541 aa22.92■■□□□ 1.26
PDLIM2-205ENST00000397761 LY9Q9HBG7 655 aa22.92■■□□□ 1.26
PDLIM2-205ENST00000397761 TOMM22Q9NS69 142 aa22.92■■□□□ 1.26
PDLIM2-205ENST00000397761 PRDM1O75626 825 aa22.92■■□□□ 1.26
PDLIM2-205ENST00000397761 GMPSP49915 693 aaPredicted RBP22.92■■□□□ 1.26
PDLIM2-205ENST00000397761 SEC23AQ15436 765 aa22.92■■□□□ 1.26
PDLIM2-205ENST00000397761 DHX36Q9H2U1 1008 aaKnown RBP22.92■■□□□ 1.26
PDLIM2-205ENST00000397761 ZNF287Q9HBT7 754 aa22.92■■□□□ 1.26
PDLIM2-205ENST00000397761 MYOZ2Q9NPC6 264 aa22.92■■□□□ 1.26
PDLIM2-205ENST00000397761 PDIA3P30101 505 aaKnown RBP22.91■■□□□ 1.26
PDLIM2-205ENST00000397761 CACNB3P54284 484 aa22.91■■□□□ 1.26
PDLIM2-205ENST00000397761 SART3Q15020 963 aaKnown RBP22.91■■□□□ 1.26
PDLIM2-205ENST00000397761 TMEM67Q5HYA8 995 aa22.91■■□□□ 1.26
PDLIM2-205ENST00000397761 GPC2Q8N158 579 aa22.91■■□□□ 1.26
PDLIM2-205ENST00000397761 ZNF70Q9UC06 446 aaPredicted RBP22.91■■□□□ 1.26
PDLIM2-205ENST00000397761 BRPF3Q9ULD4 1205 aa22.91■■□□□ 1.26
PDLIM2-205ENST00000397761 IFIT3O14879 490 aaKnown RBP22.9■■□□□ 1.26
PDLIM2-205ENST00000397761 RANBP6O60518 1105 aaKnown RBP22.9■■□□□ 1.26
PDLIM2-205ENST00000397761 RASA1P20936 1047 aa22.9■■□□□ 1.26
PDLIM2-205ENST00000397761 CDK8P49336 464 aa22.9■■□□□ 1.26
PDLIM2-205ENST00000397761 SLC4A8Q2Y0W8 1093 aa22.9■■□□□ 1.26
PDLIM2-205ENST00000397761 ZFPM1Q8IX07 1006 aa22.9■■□□□ 1.26
PDLIM2-205ENST00000397761 FOXD4L1Q9NU39 408 aa22.9■■□□□ 1.26
PDLIM2-205ENST00000397761 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.9■■□□□ 1.26
PDLIM2-205ENST00000397761 NID2Q14112 1375 aa22.89■■□□□ 1.26
PDLIM2-205ENST00000397761 SHTN1A0MZ66 631 aa22.89■■□□□ 1.25
PDLIM2-205ENST00000397761 WNT10BO00744 389 aa22.89■■□□□ 1.25
PDLIM2-205ENST00000397761 CCDC83Q8IWF9 413 aa22.89■■□□□ 1.25
PDLIM2-205ENST00000397761 TMTC2Q8N394 836 aa22.89■■□□□ 1.25
PDLIM2-205ENST00000397761 NECAB1Q8N987 351 aa22.89■■□□□ 1.25
PDLIM2-205ENST00000397761 SLC44A5Q8NCS7 719 aa22.89■■□□□ 1.25
PDLIM2-205ENST00000397761 ZSCAN10Q96SZ4 725 aaPredicted RBP22.89■■□□□ 1.25
PDLIM2-205ENST00000397761 UBAC1Q9BSL1 405 aa22.89■■□□□ 1.25
PDLIM2-205ENST00000397761 TMOD2Q9NZR1 351 aa22.89■■□□□ 1.25
PDLIM2-205ENST00000397761 CHMP5Q9NZZ3 219 aa22.89■■□□□ 1.25
PDLIM2-205ENST00000397761 SERPINB13Q9UIV8 391 aa22.89■■□□□ 1.25
PDLIM2-205ENST00000397761 HPS5Q9UPZ3 1129 aa22.89■■□□□ 1.25
PDLIM2-205ENST00000397761 KLF18A0A0U1RQI7 1052 aa22.88■■□□□ 1.25
PDLIM2-205ENST00000397761 SH3BP5LQ7L8J4 393 aa22.88■■□□□ 1.25
PDLIM2-205ENST00000397761 METTL16Q86W50 562 aaKnown RBP22.88■■□□□ 1.25
PDLIM2-205ENST00000397761 IQCA1Q86XH1 822 aa22.88■■□□□ 1.25
PDLIM2-205ENST00000397761 SENP2Q9HC62 589 aa22.88■■□□□ 1.25
PDLIM2-205ENST00000397761 TCP11L1Q9NUJ3 509 aa22.88■■□□□ 1.25
PDLIM2-205ENST00000397761 SWAP70Q9UH65 585 aa22.88■■□□□ 1.25
PDLIM2-205ENST00000397761 GJA3Q9Y6H8 435 aa22.88■■□□□ 1.25
PDLIM2-205ENST00000397761 PLIN4Q96Q06 1357 aa22.88■■□□□ 1.25
PDLIM2-205ENST00000397761 TNKSO95271 1327 aa22.87■■□□□ 1.25
PDLIM2-205ENST00000397761 HLA-DOAP06340 250 aa22.87■■□□□ 1.25
PDLIM2-205ENST00000397761 RCAN1P53805 252 aa22.87■■□□□ 1.25
PDLIM2-205ENST00000397761 SCRN1Q12765 414 aa22.87■■□□□ 1.25
PDLIM2-205ENST00000397761 WTAPQ15007 396 aa22.87■■□□□ 1.25
PDLIM2-205ENST00000397761 APOA5Q6Q788 366 aa22.87■■□□□ 1.25
PDLIM2-205ENST00000397761 MICALL2Q8IY33 904 aa22.87■■□□□ 1.25
PDLIM2-205ENST00000397761 ENAHQ8N8S7 591 aaPredicted RBP22.87■■□□□ 1.25
PDLIM2-205ENST00000397761 MKNK2Q9HBH9 465 aa22.87■■□□□ 1.25
PDLIM2-205ENST00000397761 CNOT7Q9UIV1 285 aaKnown RBP22.87■■□□□ 1.25
PDLIM2-205ENST00000397761 CNTNAP1P78357 1384 aa22.87■■□□□ 1.25
PDLIM2-205ENST00000397761 MYH6P13533 1939 aa22.87■■□□□ 1.25
PDLIM2-205ENST00000397761 MYH4Q9Y623 1939 aa22.87■■□□□ 1.25
PDLIM2-205ENST00000397761 ERICH2A1L162 156 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms