RNA–Protein interactions for RNA: ENST00000397495.8

PPM1F-202, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

TSL 2 BASIC

Gene PPM1F, Length 1,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-202ENST00000397495 APOBEC3HQ6NTF7 200 aaKnown RBP18.01■□□□□ 0.47
PPM1F-202ENST00000397495 CHST3Q7LGC8 479 aa18.01■□□□□ 0.47
PPM1F-202ENST00000397495 RALYLQ86SE5 291 aaKnown RBP18.01■□□□□ 0.47
PPM1F-202ENST00000397495 NCOA7Q8NI08 942 aa18.01■□□□□ 0.47
PPM1F-202ENST00000397495 BRF1Q92994 677 aa18.01■□□□□ 0.47
PPM1F-202ENST00000397495 SYAP1Q96A49 352 aaPredicted RBP18.01■□□□□ 0.47
PPM1F-202ENST00000397495 ZDHHC15Q96MV8 337 aa18.01■□□□□ 0.47
PPM1F-202ENST00000397495 GMLQ99445 158 aa18.01■□□□□ 0.47
PPM1F-202ENST00000397495 MRIQ9BWK5 157 aa18.01■□□□□ 0.47
PPM1F-202ENST00000397495 MKRN1Q9UHC7 482 aaKnown RBP18.01■□□□□ 0.47
PPM1F-202ENST00000397495 SERPINA10Q9UK55 444 aa18.01■□□□□ 0.47
PPM1F-202ENST00000397495 MYH1P12882 1939 aa18■□□□□ 0.47
PPM1F-202ENST00000397495 CYP2D6P10635 497 aa18■□□□□ 0.47
PPM1F-202ENST00000397495 UBE2HP62256 183 aa18■□□□□ 0.47
PPM1F-202ENST00000397495 EVX2Q03828 476 aa18■□□□□ 0.47
PPM1F-202ENST00000397495 TRDNQ13061 729 aa18■□□□□ 0.47
PPM1F-202ENST00000397495 AKNAD1Q5T1N1 836 aa18■□□□□ 0.47
PPM1F-202ENST00000397495 CDC42EP5Q6NZY7 148 aa18■□□□□ 0.47
PPM1F-202ENST00000397495 LRSAM1Q6UWE0 723 aa18■□□□□ 0.47
PPM1F-202ENST00000397495 LRRC2Q9BYS8 371 aa18■□□□□ 0.47
PPM1F-202ENST00000397495 SAP30BPQ9UHR5 308 aaKnown RBP18■□□□□ 0.47
PPM1F-202ENST00000397495 CNPY2Q9Y2B0 182 aa18■□□□□ 0.47
PPM1F-202ENST00000397495 TACC3Q9Y6A5 838 aa18■□□□□ 0.47
PPM1F-202ENST00000397495 SBF1O95248 1867 aa18■□□□□ 0.47
PPM1F-202ENST00000397495 NEDD4P46934 1319 aa18■□□□□ 0.47
PPM1F-202ENST00000397495 SCRN1Q12765 414 aa17.99■□□□□ 0.47
PPM1F-202ENST00000397495 TNIP1Q15025 636 aa17.99■□□□□ 0.47
PPM1F-202ENST00000397495 MFSD6Q6ZSS7 791 aa17.99■□□□□ 0.47
PPM1F-202ENST00000397495 PANK2Q9BZ23 570 aa17.99■□□□□ 0.47
PPM1F-202ENST00000397495 TOMM22Q9NS69 142 aa17.99■□□□□ 0.47
PPM1F-202ENST00000397495 ARPP21Q9UBL0 812 aaPredicted RBP17.99■□□□□ 0.47
PPM1F-202ENST00000397495 ELP1O95163 1332 aa17.99■□□□□ 0.47
PPM1F-202ENST00000397495 DICER1Q9UPY3 1922 aaKnown RBP17.99■□□□□ 0.47
PPM1F-202ENST00000397495 DCAF8L1A6NGE4 600 aa17.99■□□□□ 0.47
PPM1F-202ENST00000397495 B4E1Z4 1266 aa17.99■□□□□ 0.47
PPM1F-202ENST00000397495 GADD45BO75293 160 aaPredicted RBP17.99■□□□□ 0.47
PPM1F-202ENST00000397495 EIF6P56537 245 aaKnown RBP17.99■□□□□ 0.47
PPM1F-202ENST00000397495 PICALMQ13492 652 aa17.99■□□□□ 0.47
PPM1F-202ENST00000397495 CFAP100Q494V2 611 aa17.99■□□□□ 0.47
PPM1F-202ENST00000397495 RRP12Q5JTH9 1297 aaKnown RBP17.99■□□□□ 0.47
PPM1F-202ENST00000397495 MB21D2Q8IYB1 491 aaPredicted RBP17.99■□□□□ 0.47
PPM1F-202ENST00000397495 OGFOD1Q8N543 542 aa17.99■□□□□ 0.47
PPM1F-202ENST00000397495 RGS22Q8NE09 1264 aa17.99■□□□□ 0.47
PPM1F-202ENST00000397495 AGBL3Q8NEM8 1001 aa17.99■□□□□ 0.47
PPM1F-202ENST00000397495 STAG1Q8WVM7 1258 aa17.99■□□□□ 0.47
PPM1F-202ENST00000397495 ANAPC4Q9UJX5 808 aa17.99■□□□□ 0.47
PPM1F-202ENST00000397495 HDAC9Q9UKV0 1011 aa17.99■□□□□ 0.47
PPM1F-202ENST00000397495 FLT1P17948 1338 aa17.99■□□□□ 0.47
PPM1F-202ENST00000397495 LMNB1P20700 586 aa17.98■□□□□ 0.47
PPM1F-202ENST00000397495 HMGN5P82970 282 aaKnown RBP17.98■□□□□ 0.47
PPM1F-202ENST00000397495 FGD1P98174 961 aa17.98■□□□□ 0.47
PPM1F-202ENST00000397495 GPR162Q16538 588 aa17.98■□□□□ 0.47
PPM1F-202ENST00000397495 SBK1Q52WX2 424 aa17.98■□□□□ 0.47
PPM1F-202ENST00000397495 NKX2-3Q8TAU0 364 aa17.98■□□□□ 0.47
PPM1F-202ENST00000397495 RBM27Q9P2N5 1060 aaKnown RBP17.98■□□□□ 0.47
PPM1F-202ENST00000397495 FZD9O00144 591 aa17.97■□□□□ 0.47
PPM1F-202ENST00000397495 WDHD1O75717 1129 aaPredicted RBP17.97■□□□□ 0.47
PPM1F-202ENST00000397495 POLR3DP05423 398 aaPredicted RBP17.97■□□□□ 0.47
PPM1F-202ENST00000397495 MCM5P33992 734 aa17.97■□□□□ 0.47
PPM1F-202ENST00000397495 AMOTL1Q8IY63 956 aa17.97■□□□□ 0.47
PPM1F-202ENST00000397495 NSUN7Q8NE18 718 aaKnown RBP17.97■□□□□ 0.47
PPM1F-202ENST00000397495 RNF41Q9H4P4 317 aaPredicted RBP17.97■□□□□ 0.47
PPM1F-202ENST00000397495 GJA3Q9Y6H8 435 aa17.97■□□□□ 0.47
PPM1F-202ENST00000397495 DDX60LQ5H9U9 1706 aaKnown RBP17.97■□□□□ 0.47
PPM1F-202ENST00000397495 VPS37CA5D8V6 355 aaPredicted RBP17.96■□□□□ 0.47
PPM1F-202ENST00000397495 PRC1O43663 620 aa17.96■□□□□ 0.47
PPM1F-202ENST00000397495 PDIA3P30101 505 aaKnown RBP17.96■□□□□ 0.47
PPM1F-202ENST00000397495 CACNB3P54284 484 aa17.96■□□□□ 0.47
PPM1F-202ENST00000397495 DNM1Q05193 864 aaKnown RBP17.96■□□□□ 0.47
PPM1F-202ENST00000397495 C12orf60Q5U649 245 aa17.96■□□□□ 0.47
PPM1F-202ENST00000397495 CDC37L1Q7L3B6 337 aa17.96■□□□□ 0.47
PPM1F-202ENST00000397495 CNNM2Q9H8M5 875 aa17.96■□□□□ 0.47
PPM1F-202ENST00000397495 GDPD2Q9HCC8 539 aa17.96■□□□□ 0.47
PPM1F-202ENST00000397495 DDX4Q9NQI0 724 aaKnown RBP17.96■□□□□ 0.47
PPM1F-202ENST00000397495 KDM4AO75164 1064 aa17.96■□□□□ 0.47
PPM1F-202ENST00000397495 ANTXR2P58335 489 aa17.96■□□□□ 0.47
PPM1F-202ENST00000397495 STK3Q13188 491 aa17.96■□□□□ 0.47
PPM1F-202ENST00000397495 CYB5R4Q7L1T6 521 aa17.96■□□□□ 0.47
PPM1F-202ENST00000397495 PRMT6Q96LA8 375 aaPredicted RBP17.96■□□□□ 0.47
PPM1F-202ENST00000397495 KRT23Q9C075 422 aa17.96■□□□□ 0.47
PPM1F-202ENST00000397495 ZSCAN16Q9H4T2 348 aaPredicted RBP17.96■□□□□ 0.47
PPM1F-202ENST00000397495 TDRD3Q9H7E2 651 aaKnown RBP17.96■□□□□ 0.47
PPM1F-202ENST00000397495 PRDM1O75626 825 aa17.95■□□□□ 0.46
PPM1F-202ENST00000397495 LETM1O95202 739 aaPredicted RBP17.95■□□□□ 0.46
PPM1F-202ENST00000397495 CTDNEP1O95476 244 aa17.95■□□□□ 0.46
PPM1F-202ENST00000397495 PLCD1P51178 756 aa17.95■□□□□ 0.46
PPM1F-202ENST00000397495 KRT85P78386 507 aa17.95■□□□□ 0.46
PPM1F-202ENST00000397495 APOBRQ0VD83 1088 aa17.95■□□□□ 0.46
PPM1F-202ENST00000397495 NFIAQ12857 509 aa17.95■□□□□ 0.46
PPM1F-202ENST00000397495 DLGAP5Q15398 846 aa17.95■□□□□ 0.46
PPM1F-202ENST00000397495 PPP1R9BQ96SB3 815 aa17.95■□□□□ 0.46
PPM1F-202ENST00000397495 ZNF541Q9H0D2 1346 aa17.95■□□□□ 0.46
PPM1F-202ENST00000397495 KIF3AQ9Y496 699 aa17.95■□□□□ 0.46
PPM1F-202ENST00000397495 SHTN1A0MZ66 631 aa17.94■□□□□ 0.46
PPM1F-202ENST00000397495 JAK2O60674 1132 aa17.94■□□□□ 0.46
PPM1F-202ENST00000397495 SLC3A2P08195 630 aaKnown RBP17.94■□□□□ 0.46
PPM1F-202ENST00000397495 DYNLL2Q96FJ2 89 aa17.94■□□□□ 0.46
PPM1F-202ENST00000397495 GPHNQ9NQX3 736 aaPredicted RBP17.94■□□□□ 0.46
PPM1F-202ENST00000397495 ZSWIM5Q9P217 1185 aa17.94■□□□□ 0.46
PPM1F-202ENST00000397495 SPDYE2BA6NHP3 402 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms