RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 NPM3O75607 178 aaKnown RBP26.09■■□□□ 1.77
TRAF4-203ENST00000394925 LDHCP07864 332 aa26.09■■□□□ 1.77
TRAF4-203ENST00000394925 GSTO1P78417 241 aa26.09■■□□□ 1.77
TRAF4-203ENST00000394925 GORABQ5T7V8 394 aa26.09■■□□□ 1.77
TRAF4-203ENST00000394925 NSUN4Q96CB9 384 aaKnown RBP26.09■■□□□ 1.77
TRAF4-203ENST00000394925 OSBPL5Q9H0X9 879 aaPredicted RBP26.09■■□□□ 1.77
TRAF4-203ENST00000394925 PRO3102Q9H379 93 aa26.09■■□□□ 1.77
TRAF4-203ENST00000394925 FAM110CQ1W6H9 321 aa26.08■■□□□ 1.77
TRAF4-203ENST00000394925 SPATA5Q8NB90 893 aa26.08■■□□□ 1.77
TRAF4-203ENST00000394925 PROCA1Q8NCQ7 364 aaPredicted RBP26.08■■□□□ 1.77
TRAF4-203ENST00000394925 RAI14Q9P0K7 980 aa26.08■■□□□ 1.77
TRAF4-203ENST00000394925 EVI5O60447 810 aa26.07■■□□□ 1.76
TRAF4-203ENST00000394925 RARSP54136 660 aaKnown RBP26.07■■□□□ 1.76
TRAF4-203ENST00000394925 MTX1Q13505 466 aa26.07■■□□□ 1.76
TRAF4-203ENST00000394925 ZNF280CQ8ND82 737 aa26.07■■□□□ 1.76
TRAF4-203ENST00000394925 PAK6Q9NQU5 681 aaPredicted RBP26.07■■□□□ 1.76
TRAF4-203ENST00000394925 ATAD5Q96QE3 1844 aa26.07■■□□□ 1.76
TRAF4-203ENST00000394925 MAP4K4O95819 1239 aaPredicted RBP26.06■■□□□ 1.76
TRAF4-203ENST00000394925 HMGCS2P54868 508 aa26.06■■□□□ 1.76
TRAF4-203ENST00000394925 CAPN2P17655 700 aa26.05■■□□□ 1.76
TRAF4-203ENST00000394925 CAP2P40123 477 aa26.05■■□□□ 1.76
TRAF4-203ENST00000394925 RRP1BQ14684 758 aaKnown RBP26.05■■□□□ 1.76
TRAF4-203ENST00000394925 TEX11Q8IYF3 940 aa26.05■■□□□ 1.76
TRAF4-203ENST00000394925 ARHGAP45Q92619 1136 aa26.05■■□□□ 1.76
TRAF4-203ENST00000394925 LOC285556D6RIA3 1793 aa26.05■■□□□ 1.76
TRAF4-203ENST00000394925 ARID4AP29374 1257 aaPredicted RBP26.04■■□□□ 1.76
TRAF4-203ENST00000394925 GCLCP48506 637 aaPredicted RBP26.04■■□□□ 1.76
TRAF4-203ENST00000394925 PABPC4Q13310 644 aaKnown RBP eCLIP26.04■■□□□ 1.76
TRAF4-203ENST00000394925 PAWRQ96IZ0 340 aaKnown RBP26.04■■□□□ 1.76
TRAF4-203ENST00000394925 TBC1D2Q9BYX2 928 aa26.04■■□□□ 1.76
TRAF4-203ENST00000394925 CRISPLD2Q9H0B8 497 aa26.04■■□□□ 1.76
TRAF4-203ENST00000394925 COL2A1P02458 1487 aaPredicted RBP26.04■■□□□ 1.76
TRAF4-203ENST00000394925 USP17L5A8MUK1 530 aa26.03■■□□□ 1.76
TRAF4-203ENST00000394925 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.03■■□□□ 1.765e-7■■□□□ 13.3
TRAF4-203ENST00000394925 LRP2BPQ9P2M1 347 aa26.03■■□□□ 1.76
TRAF4-203ENST00000394925 MCAMP43121 646 aa26.02■■□□□ 1.76
TRAF4-203ENST00000394925 G3BP1Q13283 466 aaKnown RBP eCLIP26.02■■□□□ 1.76
TRAF4-203ENST00000394925 SH3RF3Q8TEJ3 882 aaPredicted RBP26.02■■□□□ 1.76
TRAF4-203ENST00000394925 ASCC2Q9H1I8 757 aaPredicted RBP26.02■■□□□ 1.76
TRAF4-203ENST00000394925 DIS3LQ8TF46 1054 aaKnown RBP26.01■■□□□ 1.75
TRAF4-203ENST00000394925 NOL10Q9BSC4 688 aaKnown RBP26.01■■□□□ 1.75
TRAF4-203ENST00000394925 HERC5Q9UII4 1024 aaKnown RBP26.01■■□□□ 1.75
TRAF4-203ENST00000394925 ALPK3Q96L96 1907 aa26■■□□□ 1.75
TRAF4-203ENST00000394925 GNAI2P04899 355 aa26■■□□□ 1.75
TRAF4-203ENST00000394925 SH3D19Q5HYK7 790 aa26■■□□□ 1.75
TRAF4-203ENST00000394925 NECAB2Q7Z6G3 386 aa26■■□□□ 1.75
TRAF4-203ENST00000394925 AS3MTQ9HBK9 375 aa26■■□□□ 1.75
TRAF4-203ENST00000394925 STAP2Q9UGK3 403 aa26■■□□□ 1.75
TRAF4-203ENST00000394925 GJD2Q9UKL4 321 aa26■■□□□ 1.75
TRAF4-203ENST00000394925 PNMA6EA0A0J9YXQ4 647 aa25.99■■□□□ 1.75
TRAF4-203ENST00000394925 HMGCRP04035 888 aa25.99■■□□□ 1.75
TRAF4-203ENST00000394925 UQCRFS1P1P0C7P4 283 aa25.99■■□□□ 1.75
TRAF4-203ENST00000394925 PI4KBQ9UBF8 816 aa25.99■■□□□ 1.75
TRAF4-203ENST00000394925 TNNQ9UQP3 1299 aa25.99■■□□□ 1.75
TRAF4-203ENST00000394925 TRIM32Q13049 653 aa25.98■■□□□ 1.75
TRAF4-203ENST00000394925 SNRKQ9NRH2 765 aa25.98■■□□□ 1.75
TRAF4-203ENST00000394925 AATFQ9NY61 560 aaKnown RBP eCLIP25.98■■□□□ 1.75
TRAF4-203ENST00000394925 A0A1W2PPC1 479 aa25.97■■□□□ 1.75
TRAF4-203ENST00000394925 MTMR2Q13614 643 aa25.97■■□□□ 1.75
TRAF4-203ENST00000394925 NAA16Q6N069 864 aaPredicted RBP25.97■■□□□ 1.75
TRAF4-203ENST00000394925 HMX1Q9NP08 348 aaPredicted RBP25.97■■□□□ 1.75
TRAF4-203ENST00000394925 LAMA3Q16787 3333 aa25.96■■□□□ 1.75
TRAF4-203ENST00000394925 RPTORQ8N122 1335 aa25.96■■□□□ 1.75
TRAF4-203ENST00000394925 SIPA1L1O43166 1804 aa25.96■■□□□ 1.75
TRAF4-203ENST00000394925 IPO8O15397 1037 aaKnown RBP25.96■■□□□ 1.75
TRAF4-203ENST00000394925 BAG3O95817 575 aa25.96■■□□□ 1.75
TRAF4-203ENST00000394925 TRIM27P14373 513 aa25.96■■□□□ 1.75
TRAF4-203ENST00000394925 IRX3P78415 501 aaPredicted RBP25.96■■□□□ 1.75
TRAF4-203ENST00000394925 MAPKAPK5Q8IW41 473 aa25.96■■□□□ 1.75
TRAF4-203ENST00000394925 ANKLE1Q8NAG6 615 aa25.96■■□□□ 1.75
TRAF4-203ENST00000394925 WDR18Q9BV38 432 aa25.96■■□□□ 1.75
TRAF4-203ENST00000394925 DHX36Q9H2U1 1008 aaKnown RBP25.96■■□□□ 1.75
TRAF4-203ENST00000394925 MORF4L1Q9UBU8 362 aa25.96■■□□□ 1.75
TRAF4-203ENST00000394925 BACE1P56817 501 aa25.95■■□□□ 1.74
TRAF4-203ENST00000394925 TGFBRAP1Q8WUH2 860 aa25.95■■□□□ 1.74
TRAF4-203ENST00000394925 FRAT1Q92837 279 aaPredicted RBP25.95■■□□□ 1.74
TRAF4-203ENST00000394925 P2RX7Q99572 595 aaKnown RBP25.95■■□□□ 1.74
TRAF4-203ENST00000394925 TMOD4Q9NZQ9 345 aa25.95■■□□□ 1.74
TRAF4-203ENST00000394925 PLXNB2O15031 1838 aa25.95■■□□□ 1.74
TRAF4-203ENST00000394925 SOX1O00570 391 aaPredicted RBP25.94■■□□□ 1.74
TRAF4-203ENST00000394925 PEX10O60683 326 aa25.94■■□□□ 1.74
TRAF4-203ENST00000394925 ASNSP08243 561 aa25.94■■□□□ 1.74
TRAF4-203ENST00000394925 JAG1P78504 1218 aa25.94■■□□□ 1.74
TRAF4-203ENST00000394925 TTC39AQ5SRH9 613 aa25.94■■□□□ 1.74
TRAF4-203ENST00000394925 C7orf61Q8IZ16 206 aa25.94■■□□□ 1.74
TRAF4-203ENST00000394925 CLUAP1Q96AJ1 413 aa25.94■■□□□ 1.74
TRAF4-203ENST00000394925 PLCG2P16885 1265 aa25.93■■□□□ 1.74
TRAF4-203ENST00000394925 CYP2B6P20813 491 aa25.93■■□□□ 1.74
TRAF4-203ENST00000394925 ATF7IPQ6VMQ6 1270 aa25.93■■□□□ 1.74
TRAF4-203ENST00000394925 CRACR2BQ8N4Y2 399 aaPredicted RBP25.93■■□□□ 1.74
TRAF4-203ENST00000394925 TRIB2Q92519 343 aa25.93■■□□□ 1.74
TRAF4-203ENST00000394925 LRCH3Q96II8 777 aa25.93■■□□□ 1.74
TRAF4-203ENST00000394925 DNAJC18Q9H819 358 aa25.93■■□□□ 1.74
TRAF4-203ENST00000394925 CDK5RAP2Q96SN8 1893 aa25.93■■□□□ 1.74
TRAF4-203ENST00000394925 BCAR3O75815 825 aa25.92■■□□□ 1.74
TRAF4-203ENST00000394925 GDF11O95390 407 aa25.92■■□□□ 1.74
TRAF4-203ENST00000394925 HOXA7P31268 230 aaPredicted RBP25.92■■□□□ 1.74
TRAF4-203ENST00000394925 PPP4CP60510 307 aa25.92■■□□□ 1.74
TRAF4-203ENST00000394925 SHROOM1Q2M3G4 852 aaPredicted RBP25.92■■□□□ 1.74
TRAF4-203ENST00000394925 CCDC158Q5M9N0 1113 aa25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms