RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.35■■□□□ 1.33
PTPN11-202ENST00000392597 DLEC1Q9Y238 1755 aa23.35■■□□□ 1.33
PTPN11-202ENST00000392597 SRCAPQ6ZRS2 3230 aa23.35■■□□□ 1.33
PTPN11-202ENST00000392597 FMNL1O95466 1100 aaPredicted RBP23.34■■□□□ 1.33
PTPN11-202ENST00000392597 RTN1Q16799 776 aa23.34■■□□□ 1.33
PTPN11-202ENST00000392597 SLC51AQ86UW1 340 aa23.34■■□□□ 1.33
PTPN11-202ENST00000392597 NUP62CLQ9H1M0 184 aa23.34■■□□□ 1.33
PTPN11-202ENST00000392597 TNKSO95271 1327 aa23.34■■□□□ 1.33
PTPN11-202ENST00000392597 LDHCP07864 332 aa23.34■■□□□ 1.33
PTPN11-202ENST00000392597 KIF23Q02241 960 aaPredicted RBP23.34■■□□□ 1.33
PTPN11-202ENST00000392597 SSRP1Q08945 709 aaKnown RBP23.34■■□□□ 1.33
PTPN11-202ENST00000392597 SP8Q8IXZ3 490 aa23.34■■□□□ 1.33
PTPN11-202ENST00000392597 ZNF654Q8IZM8 581 aa23.34■■□□□ 1.33
PTPN11-202ENST00000392597 ZKSCAN3Q9BRR0 538 aa23.34■■□□□ 1.33
PTPN11-202ENST00000392597 FUCA2Q9BTY2 467 aa23.34■■□□□ 1.33
PTPN11-202ENST00000392597 MYL10Q9BUA6 226 aa23.34■■□□□ 1.33
PTPN11-202ENST00000392597 RANBP6O60518 1105 aaKnown RBP23.33■■□□□ 1.33
PTPN11-202ENST00000392597 PTGER2P43116 358 aa23.33■■□□□ 1.33
PTPN11-202ENST00000392597 PPP4CP60510 307 aa23.33■■□□□ 1.33
PTPN11-202ENST00000392597 UVSSAQ2YD98 709 aa23.33■■□□□ 1.33
PTPN11-202ENST00000392597 OTUD7BQ6GQQ9 843 aa23.33■■□□□ 1.33
PTPN11-202ENST00000392597 IQCA1Q86XH1 822 aa23.33■■□□□ 1.33
PTPN11-202ENST00000392597 BICD2Q8TD16 824 aa23.33■■□□□ 1.33
PTPN11-202ENST00000392597 ZSCAN10Q96SZ4 725 aaPredicted RBP23.33■■□□□ 1.33
PTPN11-202ENST00000392597 SPON1Q9HCB6 807 aa23.33■■□□□ 1.33
PTPN11-202ENST00000392597 DACT1Q9NYF0 836 aa23.33■■□□□ 1.33
PTPN11-202ENST00000392597 CYP2D7A0A087X1C5 515 aa23.32■■□□□ 1.32
PTPN11-202ENST00000392597 BAG3O95817 575 aa23.32■■□□□ 1.32
PTPN11-202ENST00000392597 CCDC144CPQ8IYA2 1237 aa23.32■■□□□ 1.32
PTPN11-202ENST00000392597 TBC1D16Q8TBP0 767 aa23.32■■□□□ 1.32
PTPN11-202ENST00000392597 PHKBQ93100 1093 aa23.32■■□□□ 1.32
PTPN11-202ENST00000392597 POLR3EQ9NVU0 708 aa23.32■■□□□ 1.32
PTPN11-202ENST00000392597 JAG2Q9Y219 1238 aa23.32■■□□□ 1.32
PTPN11-202ENST00000392597 YEATS4O95619 227 aa23.32■■□□□ 1.32
PTPN11-202ENST00000392597 MYSM1Q5VVJ2 828 aa23.32■■□□□ 1.32
PTPN11-202ENST00000392597 STK11IPQ8N1F8 1099 aa23.32■■□□□ 1.32
PTPN11-202ENST00000392597 PPEF1O14829 653 aaPredicted RBP23.31■■□□□ 1.32
PTPN11-202ENST00000392597 TRIM29Q14134 588 aa23.31■■□□□ 1.32
PTPN11-202ENST00000392597 MAP3K11Q16584 847 aa23.31■■□□□ 1.32
PTPN11-202ENST00000392597 KRT40Q6A162 431 aa23.31■■□□□ 1.32
PTPN11-202ENST00000392597 RBM43Q6ZSC3 357 aaKnown RBP23.31■■□□□ 1.32
PTPN11-202ENST00000392597 TRIM22Q8IYM9 498 aa23.31■■□□□ 1.32
PTPN11-202ENST00000392597 ENAHQ8N8S7 591 aaPredicted RBP23.31■■□□□ 1.32
PTPN11-202ENST00000392597 FANCBQ8NB91 859 aa23.31■■□□□ 1.32
PTPN11-202ENST00000392597 PDLIM2Q96JY6 352 aa23.31■■□□□ 1.32
PTPN11-202ENST00000392597 GPR101Q96P66 508 aaPredicted RBP23.31■■□□□ 1.32
PTPN11-202ENST00000392597 CLSTN2Q9H4D0 955 aa23.31■■□□□ 1.32
PTPN11-202ENST00000392597 MKRN1Q9UHC7 482 aaKnown RBP23.31■■□□□ 1.32
PTPN11-202ENST00000392597 NPR1P16066 1061 aa23.3■■□□□ 1.32
PTPN11-202ENST00000392597 CEBPZQ03701 1054 aaKnown RBP23.3■■□□□ 1.32
PTPN11-202ENST00000392597 FAM43AQ8N2R8 423 aa23.3■■□□□ 1.32
PTPN11-202ENST00000392597 TBC1D22AQ8WUA7 517 aa23.3■■□□□ 1.32
PTPN11-202ENST00000392597 NOL10Q9BSC4 688 aaKnown RBP23.3■■□□□ 1.32
PTPN11-202ENST00000392597 POLLQ9UGP5 575 aa23.3■■□□□ 1.32
PTPN11-202ENST00000392597 ATP6V0A2Q9Y487 856 aa23.3■■□□□ 1.32
PTPN11-202ENST00000392597 C10orf71Q711Q0 1435 aa23.3■■□□□ 1.32
PTPN11-202ENST00000392597 SMIM22K7EJ46 135 aa23.3■■□□□ 1.32
PTPN11-202ENST00000392597 PDE4BQ07343 736 aa23.3■■□□□ 1.32
PTPN11-202ENST00000392597 KCNG4Q8TDN1 519 aa23.3■■□□□ 1.32
PTPN11-202ENST00000392597 SLC26A6Q9BXS9 759 aa23.3■■□□□ 1.32
PTPN11-202ENST00000392597 FTOQ9C0B1 505 aaKnown RBP eCLIP23.3■■□□□ 1.32
PTPN11-202ENST00000392597 MROH7-TTC4A0A0A0MT08 1334 aa23.29■■□□□ 1.32
PTPN11-202ENST00000392597 CCDC192P0DO97 292 aa23.29■■□□□ 1.32
PTPN11-202ENST00000392597 SRGNP10124 158 aa23.29■■□□□ 1.32
PTPN11-202ENST00000392597 RNF214Q8ND24 703 aa23.29■■□□□ 1.32
PTPN11-202ENST00000392597 TRIM44Q96DX7 344 aaPredicted RBP23.29■■□□□ 1.32
PTPN11-202ENST00000392597 AIFM3Q96NN9 605 aa23.29■■□□□ 1.32
PTPN11-202ENST00000392597 TNMDQ9H2S6 317 aa23.29■■□□□ 1.32
PTPN11-202ENST00000392597 NR1I2O75469 434 aa23.28■■□□□ 1.32
PTPN11-202ENST00000392597 CALM1P0DP23 149 aa23.28■■□□□ 1.32
PTPN11-202ENST00000392597 CALM2P0DP24 149 aa23.28■■□□□ 1.32
PTPN11-202ENST00000392597 CALM3P0DP25 149 aa23.28■■□□□ 1.32
PTPN11-202ENST00000392597 IFIT1BQ5T764 474 aaKnown RBP23.28■■□□□ 1.32
PTPN11-202ENST00000392597 NBPF11Q86T75 865 aa23.28■■□□□ 1.32
PTPN11-202ENST00000392597 CRACR2BQ8N4Y2 399 aaPredicted RBP23.28■■□□□ 1.32
PTPN11-202ENST00000392597 LINC00301Q8NCQ3 95 aa23.28■■□□□ 1.32
PTPN11-202ENST00000392597 GJB4Q9NTQ9 266 aa23.28■■□□□ 1.32
PTPN11-202ENST00000392597 FAM205AQ6ZU69 1335 aa23.28■■□□□ 1.32
PTPN11-202ENST00000392597 ROBO3Q96MS0 1386 aa23.28■■□□□ 1.32
PTPN11-202ENST00000392597 KIF13BQ9NQT8 1826 aa23.28■■□□□ 1.32
PTPN11-202ENST00000392597 KIF28PB7ZC32 967 aa23.28■■□□□ 1.32
PTPN11-202ENST00000392597 DEXIO95424 95 aa23.28■■□□□ 1.32
PTPN11-202ENST00000392597 POLR3DP05423 398 aaPredicted RBP23.28■■□□□ 1.32
PTPN11-202ENST00000392597 U2AF2P26368 475 aaKnown RBP eCLIP23.28■■□□□ 1.32
PTPN11-202ENST00000392597 PDE6BP35913 854 aa23.28■■□□□ 1.32
PTPN11-202ENST00000392597 CATIPQ7Z7H3 387 aa23.28■■□□□ 1.32
PTPN11-202ENST00000392597 SLF2Q8IX21 1173 aa23.28■■□□□ 1.32
PTPN11-202ENST00000392597 MCM9Q9NXL9 1143 aa23.28■■□□□ 1.32
PTPN11-202ENST00000392597 A0A1W2PQ27 194 aa23.27■■□□□ 1.32
PTPN11-202ENST00000392597 A0A1W2PQ64 194 aa23.27■■□□□ 1.32
PTPN11-202ENST00000392597 A0A1W2PQD8 194 aa23.27■■□□□ 1.32
PTPN11-202ENST00000392597 DDAH1O94760 285 aa23.27■■□□□ 1.32
PTPN11-202ENST00000392597 USP5P45974 858 aa23.27■■□□□ 1.32
PTPN11-202ENST00000392597 C12orf60Q5U649 245 aa23.27■■□□□ 1.32
PTPN11-202ENST00000392597 FAM163AQ96GL9 167 aaPredicted RBP23.27■■□□□ 1.32
PTPN11-202ENST00000392597 RBM28Q9NW13 759 aaKnown RBP23.27■■□□□ 1.32
PTPN11-202ENST00000392597 NAV1Q8NEY1 1877 aa23.26■■□□□ 1.31
PTPN11-202ENST00000392597 ALDH1B1P30837 517 aa23.26■■□□□ 1.31
PTPN11-202ENST00000392597 ME1P48163 572 aa23.26■■□□□ 1.31
PTPN11-202ENST00000392597 GRIK5Q16478 980 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms