RNA–Protein interactions for RNA: ENST00000390387.3

TRBV3-1-201, Transcript of T cell receptor beta variable 3-1, humanhuman

APPRIS P1 BASIC

Gene TRBV3-1, Length 391 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV3-1-201ENST00000390387 SPTY2D1Q68D10 685 aaPredicted RBP11.56□□□□□ -0.56
TRBV3-1-201ENST00000390387 ERICH6Q7L0X2 663 aa11.56□□□□□ -0.56
TRBV3-1-201ENST00000390387 ANKRD13CQ8N6S4 541 aa11.56□□□□□ -0.56
TRBV3-1-201ENST00000390387 PAK6Q9NQU5 681 aaPredicted RBP11.56□□□□□ -0.56
TRBV3-1-201ENST00000390387 HDAC5Q9UQL6 1122 aa11.56□□□□□ -0.56
TRBV3-1-201ENST00000390387 NR2E3Q9Y5X4 410 aa11.56□□□□□ -0.56
TRBV3-1-201ENST00000390387 COL6A3P12111 3177 aa11.56□□□□□ -0.56
TRBV3-1-201ENST00000390387 MTX1Q13505 466 aa11.55□□□□□ -0.56
TRBV3-1-201ENST00000390387 MVPQ14764 893 aaKnown RBP11.55□□□□□ -0.56
TRBV3-1-201ENST00000390387 FAM110CQ1W6H9 321 aa11.55□□□□□ -0.56
TRBV3-1-201ENST00000390387 PI16Q6UXB8 463 aa11.55□□□□□ -0.56
TRBV3-1-201ENST00000390387 PROCA1Q8NCQ7 364 aaPredicted RBP11.55□□□□□ -0.56
TRBV3-1-201ENST00000390387 NSUN4Q96CB9 384 aaKnown RBP11.55□□□□□ -0.56
TRBV3-1-201ENST00000390387 DEFB118Q96PH6 123 aa11.55□□□□□ -0.56
TRBV3-1-201ENST00000390387 HMG20BQ9P0W2 317 aa11.55□□□□□ -0.56
TRBV3-1-201ENST00000390387 AKAP2Q9Y2D5 859 aa11.55□□□□□ -0.56
TRBV3-1-201ENST00000390387 COL2A1P02458 1487 aaPredicted RBP11.55□□□□□ -0.56
TRBV3-1-201ENST00000390387 LOC285556D6RIA3 1793 aa11.54□□□□□ -0.56
TRBV3-1-201ENST00000390387 SRGAP3O43295 1099 aa11.54□□□□□ -0.56
TRBV3-1-201ENST00000390387 SPP2Q13103 211 aa11.54□□□□□ -0.56
TRBV3-1-201ENST00000390387 RRP1BQ14684 758 aaKnown RBP11.54□□□□□ -0.56
TRBV3-1-201ENST00000390387 COA7Q96BR5 231 aa11.54□□□□□ -0.56
TRBV3-1-201ENST00000390387 CRISPLD2Q9H0B8 497 aa11.54□□□□□ -0.56
TRBV3-1-201ENST00000390387 OSBPL5Q9H0X9 879 aaPredicted RBP11.54□□□□□ -0.56
TRBV3-1-201ENST00000390387 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.54□□□□□ -0.56
TRBV3-1-201ENST00000390387 PNMA3Q9UL41 463 aa11.54□□□□□ -0.56
TRBV3-1-201ENST00000390387 MAP4K4O95819 1239 aaPredicted RBP11.53□□□□□ -0.56
TRBV3-1-201ENST00000390387 TFRCP02786 760 aaKnown RBP11.53□□□□□ -0.56
TRBV3-1-201ENST00000390387 GNAI3P08754 354 aa11.53□□□□□ -0.56
TRBV3-1-201ENST00000390387 CAPN2P17655 700 aa11.53□□□□□ -0.56
TRBV3-1-201ENST00000390387 RARSP54136 660 aaKnown RBP11.53□□□□□ -0.56
TRBV3-1-201ENST00000390387 TBC1D9Q6ZT07 1266 aa11.53□□□□□ -0.56
TRBV3-1-201ENST00000390387 SPATA5Q8NB90 893 aa11.53□□□□□ -0.56
TRBV3-1-201ENST00000390387 ZNF280CQ8ND82 737 aa11.53□□□□□ -0.56
TRBV3-1-201ENST00000390387 NEUROD6Q96NK8 337 aa11.53□□□□□ -0.56
TRBV3-1-201ENST00000390387 TAOK2Q9UL54 1235 aa11.53□□□□□ -0.56
TRBV3-1-201ENST00000390387 A0A0C4DFX4 3053 aa11.53□□□□□ -0.56
TRBV3-1-201ENST00000390387 EVI5O60447 810 aa11.52□□□□□ -0.57
TRBV3-1-201ENST00000390387 LDHCP07864 332 aa11.52□□□□□ -0.57
TRBV3-1-201ENST00000390387 ARID4AP29374 1257 aaPredicted RBP11.52□□□□□ -0.57
TRBV3-1-201ENST00000390387 CAP2P40123 477 aa11.52□□□□□ -0.57
TRBV3-1-201ENST00000390387 MCAMP43121 646 aa11.52□□□□□ -0.57
TRBV3-1-201ENST00000390387 GCLCP48506 637 aaPredicted RBP11.52□□□□□ -0.57
TRBV3-1-201ENST00000390387 HMGCS2P54868 508 aa11.52□□□□□ -0.57
TRBV3-1-201ENST00000390387 GSTO1P78417 241 aa11.52□□□□□ -0.57
TRBV3-1-201ENST00000390387 DIS3LQ8TF46 1054 aaKnown RBP11.52□□□□□ -0.57
TRBV3-1-201ENST00000390387 ARHGAP45Q92619 1136 aa11.52□□□□□ -0.57
TRBV3-1-201ENST00000390387 PAWRQ96IZ0 340 aaKnown RBP11.52□□□□□ -0.57
TRBV3-1-201ENST00000390387 TBC1D2Q9BYX2 928 aa11.52□□□□□ -0.57
TRBV3-1-201ENST00000390387 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.52□□□□□ -0.57
TRBV3-1-201ENST00000390387 ASCC2Q9H1I8 757 aaPredicted RBP11.52□□□□□ -0.57
TRBV3-1-201ENST00000390387 GJD2Q9UKL4 321 aa11.52□□□□□ -0.57
TRBV3-1-201ENST00000390387 DOCK3Q8IZD9 2030 aa11.52□□□□□ -0.57
TRBV3-1-201ENST00000390387 ATAD5Q96QE3 1844 aa11.51□□□□□ -0.57
TRBV3-1-201ENST00000390387 A0A1W2PPC1 479 aa11.51□□□□□ -0.57
TRBV3-1-201ENST00000390387 USP17L5A8MUK1 530 aa11.51□□□□□ -0.57
TRBV3-1-201ENST00000390387 HMGCRP04035 888 aa11.51□□□□□ -0.57
TRBV3-1-201ENST00000390387 PABPC4Q13310 644 aaKnown RBP eCLIP11.51□□□□□ -0.57
TRBV3-1-201ENST00000390387 SH3D19Q5HYK7 790 aa11.51□□□□□ -0.57
TRBV3-1-201ENST00000390387 TEX11Q8IYF3 940 aa11.51□□□□□ -0.57
TRBV3-1-201ENST00000390387 RAI14Q9P0K7 980 aa11.51□□□□□ -0.57
TRBV3-1-201ENST00000390387 HERC5Q9UII4 1024 aaKnown RBP11.51□□□□□ -0.57
TRBV3-1-201ENST00000390387 SIPA1L1O43166 1804 aa11.51□□□□□ -0.57
TRBV3-1-201ENST00000390387 ALPK3Q96L96 1907 aa11.5□□□□□ -0.57
TRBV3-1-201ENST00000390387 SOX1O00570 391 aaPredicted RBP11.5□□□□□ -0.57
TRBV3-1-201ENST00000390387 MNX1P50219 401 aaPredicted RBP11.5□□□□□ -0.57
TRBV3-1-201ENST00000390387 TRIM32Q13049 653 aa11.5□□□□□ -0.57
TRBV3-1-201ENST00000390387 GORABQ5T7V8 394 aa11.5□□□□□ -0.57
TRBV3-1-201ENST00000390387 NECAB2Q7Z6G3 386 aa11.5□□□□□ -0.57
TRBV3-1-201ENST00000390387 ANKLE1Q8NAG6 615 aa11.5□□□□□ -0.57
TRBV3-1-201ENST00000390387 SH3RF3Q8TEJ3 882 aaPredicted RBP11.5□□□□□ -0.57
TRBV3-1-201ENST00000390387 MORF4L1Q9UBU8 362 aa11.5□□□□□ -0.57
TRBV3-1-201ENST00000390387 STAP2Q9UGK3 403 aa11.5□□□□□ -0.57
TRBV3-1-201ENST00000390387 TNNQ9UQP3 1299 aa11.5□□□□□ -0.57
TRBV3-1-201ENST00000390387 PNMA6EA0A0J9YXQ4 647 aa11.49□□□□□ -0.57
TRBV3-1-201ENST00000390387 GNAI2P04899 355 aa11.49□□□□□ -0.57
TRBV3-1-201ENST00000390387 JAG1P78504 1218 aa11.49□□□□□ -0.57
TRBV3-1-201ENST00000390387 MTMR2Q13614 643 aa11.49□□□□□ -0.57
TRBV3-1-201ENST00000390387 TRIB2Q92519 343 aa11.49□□□□□ -0.57
TRBV3-1-201ENST00000390387 LRCH3Q96II8 777 aa11.49□□□□□ -0.57
TRBV3-1-201ENST00000390387 WDR18Q9BV38 432 aa11.49□□□□□ -0.57
TRBV3-1-201ENST00000390387 DNAJC18Q9H819 358 aa11.49□□□□□ -0.57
TRBV3-1-201ENST00000390387 AS3MTQ9HBK9 375 aa11.49□□□□□ -0.57
TRBV3-1-201ENST00000390387 AATFQ9NY61 560 aaKnown RBP eCLIP11.49□□□□□ -0.57
TRBV3-1-201ENST00000390387 LRP2BPQ9P2M1 347 aa11.49□□□□□ -0.57
TRBV3-1-201ENST00000390387 PI4KBQ9UBF8 816 aa11.49□□□□□ -0.57
TRBV3-1-201ENST00000390387 RPTORQ8N122 1335 aa11.49□□□□□ -0.57
TRBV3-1-201ENST00000390387 MAST2Q6P0Q8 1798 aa11.49□□□□□ -0.57
TRBV3-1-201ENST00000390387 PLXNB2O15031 1838 aa11.49□□□□□ -0.57
TRBV3-1-201ENST00000390387 PEX10O60683 326 aa11.48□□□□□ -0.57
TRBV3-1-201ENST00000390387 UQCRFS1P1P0C7P4 283 aa11.48□□□□□ -0.57
TRBV3-1-201ENST00000390387 TRIM27P14373 513 aa11.48□□□□□ -0.57
TRBV3-1-201ENST00000390387 BACE1P56817 501 aa11.48□□□□□ -0.57
TRBV3-1-201ENST00000390387 PPP4CP60510 307 aa11.48□□□□□ -0.57
TRBV3-1-201ENST00000390387 G3BP1Q13283 466 aaKnown RBP eCLIP11.48□□□□□ -0.57
TRBV3-1-201ENST00000390387 SHROOM1Q2M3G4 852 aaPredicted RBP11.48□□□□□ -0.57
TRBV3-1-201ENST00000390387 MAP3K21Q5TCX8 1036 aa11.48□□□□□ -0.57
TRBV3-1-201ENST00000390387 NAA16Q6N069 864 aaPredicted RBP11.48□□□□□ -0.57
TRBV3-1-201ENST00000390387 ADGRA1Q86SQ6 560 aa11.48□□□□□ -0.57
TRBV3-1-201ENST00000390387 METTL16Q86W50 562 aaKnown RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms