RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 YEATS4O95619 227 aa22.39■■□□□ 1.17
GMDS-201ENST00000380805 LDHBP07195 334 aaKnown RBP22.39■■□□□ 1.17
GMDS-201ENST00000380805 PPP4CP60510 307 aa22.39■■□□□ 1.17
GMDS-201ENST00000380805 GSTO1P78417 241 aa22.39■■□□□ 1.17
GMDS-201ENST00000380805 CLSTN2Q9H4D0 955 aa22.39■■□□□ 1.17
GMDS-201ENST00000380805 TOMM22Q9NS69 142 aa22.39■■□□□ 1.17
GMDS-201ENST00000380805 DACT1Q9NYF0 836 aa22.39■■□□□ 1.17
GMDS-201ENST00000380805 MKRN1Q9UHC7 482 aaKnown RBP22.39■■□□□ 1.17
GMDS-201ENST00000380805 MYH6P13533 1939 aa22.39■■□□□ 1.17
GMDS-201ENST00000380805 ROBO3Q96MS0 1386 aa22.38■■□□□ 1.17
GMDS-201ENST00000380805 COL11A2P13942 1736 aaPredicted RBP22.38■■□□□ 1.17
GMDS-201ENST00000380805 CCDC196A0A1B0GTZ2 297 aa22.38■■□□□ 1.17
GMDS-201ENST00000380805 USP17L12C9JPN9 530 aa22.38■■□□□ 1.17
GMDS-201ENST00000380805 USP17L21D6R901 530 aa22.38■■□□□ 1.17
GMDS-201ENST00000380805 RTN1Q16799 776 aa22.38■■□□□ 1.17
GMDS-201ENST00000380805 MYSM1Q5VVJ2 828 aa22.38■■□□□ 1.17
GMDS-201ENST00000380805 OTUD7BQ6GQQ9 843 aa22.38■■□□□ 1.17
GMDS-201ENST00000380805 ZNF654Q8IZM8 581 aa22.38■■□□□ 1.17
GMDS-201ENST00000380805 MYL10Q9BUA6 226 aa22.38■■□□□ 1.17
GMDS-201ENST00000380805 CD209Q9NNX6 404 aa22.38■■□□□ 1.17
GMDS-201ENST00000380805 SRCAPQ6ZRS2 3230 aa22.38■■□□□ 1.17
GMDS-201ENST00000380805 UFL1O94874 794 aa22.37■■□□□ 1.17
GMDS-201ENST00000380805 MAP3K11Q16584 847 aa22.37■■□□□ 1.17
GMDS-201ENST00000380805 CERS3Q8IU89 383 aa22.37■■□□□ 1.17
GMDS-201ENST00000380805 WASF1Q92558 559 aa22.37■■□□□ 1.17
GMDS-201ENST00000380805 ZSCAN10Q96SZ4 725 aaPredicted RBP22.37■■□□□ 1.17
GMDS-201ENST00000380805 FTOQ9C0B1 505 aaKnown RBP eCLIP22.37■■□□□ 1.17
GMDS-201ENST00000380805 KIF28PB7ZC32 967 aa22.37■■□□□ 1.17
GMDS-201ENST00000380805 SMIM22K7EJ46 135 aa22.37■■□□□ 1.17
GMDS-201ENST00000380805 KRT40Q6A162 431 aa22.37■■□□□ 1.17
GMDS-201ENST00000380805 NBPF11Q86T75 865 aa22.37■■□□□ 1.17
GMDS-201ENST00000380805 ENAHQ8N8S7 591 aaPredicted RBP22.37■■□□□ 1.17
GMDS-201ENST00000380805 BICD2Q8TD16 824 aa22.37■■□□□ 1.17
GMDS-201ENST00000380805 PHKBQ93100 1093 aa22.37■■□□□ 1.17
GMDS-201ENST00000380805 ZKSCAN3Q9BRR0 538 aa22.37■■□□□ 1.17
GMDS-201ENST00000380805 FOCADQ5VW36 1801 aa22.36■■□□□ 1.17
GMDS-201ENST00000380805 CYP2D7A0A087X1C5 515 aa22.36■■□□□ 1.17
GMDS-201ENST00000380805 SSRP1Q08945 709 aaKnown RBP22.36■■□□□ 1.17
GMDS-201ENST00000380805 SP8Q8IXZ3 490 aa22.36■■□□□ 1.17
GMDS-201ENST00000380805 LINC00301Q8NCQ3 95 aa22.36■■□□□ 1.17
GMDS-201ENST00000380805 TBC1D16Q8TBP0 767 aa22.36■■□□□ 1.17
GMDS-201ENST00000380805 NR1I2O75469 434 aa22.35■■□□□ 1.17
GMDS-201ENST00000380805 MMP10P09238 476 aa22.35■■□□□ 1.17
GMDS-201ENST00000380805 U2AF2P26368 475 aaKnown RBP eCLIP22.35■■□□□ 1.176e-7■□□□□ 10.6
GMDS-201ENST00000380805 IQCA1Q86XH1 822 aa22.35■■□□□ 1.17
GMDS-201ENST00000380805 CCDC144CPQ8IYA2 1237 aa22.35■■□□□ 1.17
GMDS-201ENST00000380805 FANCBQ8NB91 859 aa22.35■■□□□ 1.17
GMDS-201ENST00000380805 KCNG4Q8TDN1 519 aa22.35■■□□□ 1.17
GMDS-201ENST00000380805 AIFM3Q96NN9 605 aa22.35■■□□□ 1.17
GMDS-201ENST00000380805 MTFR1LQ9H019 292 aa22.35■■□□□ 1.17
GMDS-201ENST00000380805 GJB4Q9NTQ9 266 aa22.35■■□□□ 1.17
GMDS-201ENST00000380805 MROH7-TTC4A0A0A0MT08 1334 aa22.35■■□□□ 1.17
GMDS-201ENST00000380805 A0A1W2PQ27 194 aa22.34■■□□□ 1.17
GMDS-201ENST00000380805 A0A1W2PQ64 194 aa22.34■■□□□ 1.17
GMDS-201ENST00000380805 A0A1W2PQD8 194 aa22.34■■□□□ 1.17
GMDS-201ENST00000380805 LDHCP07864 332 aa22.34■■□□□ 1.17
GMDS-201ENST00000380805 SLC3A2P08195 630 aaKnown RBP22.34■■□□□ 1.17
GMDS-201ENST00000380805 CCDC192P0DO97 292 aa22.34■■□□□ 1.17
GMDS-201ENST00000380805 HS1BP3Q53T59 392 aa22.34■■□□□ 1.17
GMDS-201ENST00000380805 RNF214Q8ND24 703 aa22.34■■□□□ 1.17
GMDS-201ENST00000380805 TNMDQ9H2S6 317 aa22.34■■□□□ 1.17
GMDS-201ENST00000380805 TPRNQ4KMQ1 711 aa22.34■■□□□ 1.17
GMDS-201ENST00000380805 ADALQ6DHV7 355 aa22.34■■□□□ 1.17
GMDS-201ENST00000380805 CRACR2BQ8N4Y2 399 aaPredicted RBP22.34■■□□□ 1.17
GMDS-201ENST00000380805 POLLQ9UGP5 575 aa22.34■■□□□ 1.17
GMDS-201ENST00000380805 FAM205AQ6ZU69 1335 aa22.33■■□□□ 1.17
GMDS-201ENST00000380805 BAG3O95817 575 aa22.33■■□□□ 1.17
GMDS-201ENST00000380805 CEBPZQ03701 1054 aaKnown RBP22.33■■□□□ 1.17
GMDS-201ENST00000380805 TRIM22Q8IYM9 498 aa22.33■■□□□ 1.17
GMDS-201ENST00000380805 ENGASEQ8NFI3 743 aa22.33■■□□□ 1.17
GMDS-201ENST00000380805 TRIM44Q96DX7 344 aaPredicted RBP22.33■■□□□ 1.17
GMDS-201ENST00000380805 GPR101Q96P66 508 aaPredicted RBP22.33■■□□□ 1.17
GMDS-201ENST00000380805 SLC26A6Q9BXS9 759 aa22.33■■□□□ 1.17
GMDS-201ENST00000380805 JAG2Q9Y219 1238 aa22.33■■□□□ 1.17
GMDS-201ENST00000380805 ATP6V0A2Q9Y487 856 aa22.33■■□□□ 1.17
GMDS-201ENST00000380805 PPEF1O14829 653 aaPredicted RBP22.32■■□□□ 1.16
GMDS-201ENST00000380805 DDAH1O94760 285 aa22.32■■□□□ 1.16
GMDS-201ENST00000380805 DEXIO95424 95 aa22.32■■□□□ 1.16
GMDS-201ENST00000380805 CALM1P0DP23 149 aa22.32■■□□□ 1.16
GMDS-201ENST00000380805 CALM2P0DP24 149 aa22.32■■□□□ 1.16
GMDS-201ENST00000380805 CALM3P0DP25 149 aa22.32■■□□□ 1.16
GMDS-201ENST00000380805 SRGNP10124 158 aa22.32■■□□□ 1.16
GMDS-201ENST00000380805 GRIK5Q16478 980 aa22.32■■□□□ 1.16
GMDS-201ENST00000380805 TBC1D22AQ8WUA7 517 aa22.32■■□□□ 1.16
GMDS-201ENST00000380805 FAM163AQ96GL9 167 aaPredicted RBP22.32■■□□□ 1.16
GMDS-201ENST00000380805 RTFDC1Q9BY42 306 aaPredicted RBP22.32■■□□□ 1.16
GMDS-201ENST00000380805 RNF26Q9BY78 433 aaPredicted RBP22.32■■□□□ 1.16
GMDS-201ENST00000380805 POLR3DP05423 398 aaPredicted RBP22.31■■□□□ 1.16
GMDS-201ENST00000380805 FAM160A1Q05DH4 1040 aa22.31■■□□□ 1.16
GMDS-201ENST00000380805 TROAPQ12815 778 aa22.31■■□□□ 1.16
GMDS-201ENST00000380805 SNW1Q13573 536 aaKnown RBP22.31■■□□□ 1.16
GMDS-201ENST00000380805 TRIM29Q14134 588 aa22.31■■□□□ 1.16
GMDS-201ENST00000380805 C12orf60Q5U649 245 aa22.31■■□□□ 1.16
GMDS-201ENST00000380805 ANO1Q5XXA6 986 aa22.31■■□□□ 1.16
GMDS-201ENST00000380805 CCAR1Q8IX12 1150 aaKnown RBP22.31■■□□□ 1.16
GMDS-201ENST00000380805 STK11IPQ8N1F8 1099 aa22.31■■□□□ 1.16
GMDS-201ENST00000380805 RBM28Q9NW13 759 aaKnown RBP22.31■■□□□ 1.16
GMDS-201ENST00000380805 PCDHA7Q9UN72 937 aa22.31■■□□□ 1.16
GMDS-201ENST00000380805 CLIC4Q9Y696 253 aa22.31■■□□□ 1.16
GMDS-201ENST00000380805 CTAGE5O15320 804 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms