RNA–Protein interactions for RNA: ENST00000378105.4

PCDHGA1-201, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA1, Length 4,069 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-201ENST00000378105 CCDC83Q8IWF9 413 aa12.36□□□□□ -0.43
PCDHGA1-201ENST00000378105 CRACR2BQ8N4Y2 399 aaPredicted RBP12.36□□□□□ -0.43
PCDHGA1-201ENST00000378105 MIGA1Q8NAN2 632 aa12.36□□□□□ -0.43
PCDHGA1-201ENST00000378105 FBXO18Q8NFZ0 1043 aa12.36□□□□□ -0.43
PCDHGA1-201ENST00000378105 SPATS2LQ9NUQ6 558 aaKnown RBP12.36□□□□□ -0.43
PCDHGA1-201ENST00000378105 EYA2O00167 538 aa12.36□□□□□ -0.43
PCDHGA1-201ENST00000378105 ZNF213O14771 459 aa12.36□□□□□ -0.43
PCDHGA1-201ENST00000378105 ARMC9Q7Z3E5 817 aa12.36□□□□□ -0.43
PCDHGA1-201ENST00000378105 CEP350Q5VT06 3117 aa12.35□□□□□ -0.43
PCDHGA1-201ENST00000378105 CYP7A1P22680 504 aa12.35□□□□□ -0.43
PCDHGA1-201ENST00000378105 ADCY2Q08462 1091 aa12.35□□□□□ -0.43
PCDHGA1-201ENST00000378105 CDC37L1Q7L3B6 337 aa12.35□□□□□ -0.43
PCDHGA1-201ENST00000378105 VEZTQ9HBM0 779 aa12.35□□□□□ -0.43
PCDHGA1-201ENST00000378105 TMCO5BA8MYB1 307 aa12.35□□□□□ -0.43
PCDHGA1-201ENST00000378105 LRMPQ12912 555 aa12.35□□□□□ -0.43
PCDHGA1-201ENST00000378105 TBC1D25Q3MII6 688 aa12.35□□□□□ -0.43
PCDHGA1-201ENST00000378105 ARHGAP27Q6ZUM4 889 aa12.35□□□□□ -0.43
PCDHGA1-201ENST00000378105 CCDC186Q7Z3E2 898 aa12.35□□□□□ -0.43
PCDHGA1-201ENST00000378105 PDE8AO60658 829 aa12.35□□□□□ -0.43
PCDHGA1-201ENST00000378105 MYBL1P10243 752 aa12.35□□□□□ -0.43
PCDHGA1-201ENST00000378105 ERCC6LQ2NKX8 1250 aa12.35□□□□□ -0.43
PCDHGA1-201ENST00000378105 PARP10Q53GL7 1025 aa12.35□□□□□ -0.43
PCDHGA1-201ENST00000378105 SPTY2D1Q68D10 685 aaPredicted RBP12.35□□□□□ -0.43
PCDHGA1-201ENST00000378105 KIF2CQ99661 725 aa12.35□□□□□ -0.43
PCDHGA1-201ENST00000378105 RABEP2Q9H5N1 569 aa12.35□□□□□ -0.43
PCDHGA1-201ENST00000378105 DOCK2Q92608 1830 aa12.35□□□□□ -0.43
PCDHGA1-201ENST00000378105 USP34Q70CQ2 3546 aa12.34□□□□□ -0.43
PCDHGA1-201ENST00000378105 CD2BP2O95400 341 aaKnown RBP12.34□□□□□ -0.43
PCDHGA1-201ENST00000378105 LMNB1P20700 586 aa12.34□□□□□ -0.43
PCDHGA1-201ENST00000378105 OAS2P29728 719 aaKnown RBP12.34□□□□□ -0.43
PCDHGA1-201ENST00000378105 BAG6P46379 1132 aa12.34□□□□□ -0.43
PCDHGA1-201ENST00000378105 PLA2G4AP47712 749 aa12.34□□□□□ -0.43
PCDHGA1-201ENST00000378105 IRX1P78414 480 aaPredicted RBP12.34□□□□□ -0.43
PCDHGA1-201ENST00000378105 BEND3Q5T5X7 828 aa12.34□□□□□ -0.43
PCDHGA1-201ENST00000378105 C16orf87Q6PH81 154 aa12.34□□□□□ -0.43
PCDHGA1-201ENST00000378105 LRRC31Q6UY01 552 aa12.34□□□□□ -0.43
PCDHGA1-201ENST00000378105 ZNF483Q8TF39 744 aaPredicted RBP12.34□□□□□ -0.43
PCDHGA1-201ENST00000378105 NF2P35240 595 aa12.34□□□□□ -0.43
PCDHGA1-201ENST00000378105 TPM4P67936 248 aa12.34□□□□□ -0.43
PCDHGA1-201ENST00000378105 LARP1BQ659C4 914 aaKnown RBP12.34□□□□□ -0.43
PCDHGA1-201ENST00000378105 UHMK1Q8TAS1 419 aaKnown RBP12.34□□□□□ -0.43
PCDHGA1-201ENST00000378105 EDC3Q96F86 508 aaKnown RBP12.34□□□□□ -0.43
PCDHGA1-201ENST00000378105 TSPY26PQ9H489 355 aa12.34□□□□□ -0.43
PCDHGA1-201ENST00000378105 ELF1P32519 619 aa12.34□□□□□ -0.43
PCDHGA1-201ENST00000378105 NAA25Q14CX7 972 aa12.34□□□□□ -0.43
PCDHGA1-201ENST00000378105 CCDC144CPQ8IYA2 1237 aa12.34□□□□□ -0.43
PCDHGA1-201ENST00000378105 ZNF772Q68DY9 489 aaPredicted RBP12.33□□□□□ -0.43
PCDHGA1-201ENST00000378105 KIAA1524Q8TCG1 905 aa12.33□□□□□ -0.43
PCDHGA1-201ENST00000378105 PAG1Q9NWQ8 432 aa12.33□□□□□ -0.43
PCDHGA1-201ENST00000378105 TCEAL9Q9UHQ7 104 aa12.33□□□□□ -0.43
PCDHGA1-201ENST00000378105 KRT32Q14532 448 aa12.33□□□□□ -0.44
PCDHGA1-201ENST00000378105 CEP89Q96ST8 783 aa12.33□□□□□ -0.44
PCDHGA1-201ENST00000378105 UQCRFS1P1P0C7P4 283 aa12.33□□□□□ -0.44
PCDHGA1-201ENST00000378105 MAGEA10P43363 369 aaPredicted RBP12.33□□□□□ -0.44
PCDHGA1-201ENST00000378105 RBM26Q5T8P6 1007 aaKnown RBP12.33□□□□□ -0.44
PCDHGA1-201ENST00000378105 CENPHQ9H3R5 247 aa12.33□□□□□ -0.44
PCDHGA1-201ENST00000378105 SRP68Q9UHB9 627 aaKnown RBP12.33□□□□□ -0.44
PCDHGA1-201ENST00000378105 PNMA6AP0CW24 399 aaPredicted RBP12.32□□□□□ -0.44
PCDHGA1-201ENST00000378105 TPP2P29144 1249 aaPredicted RBP12.32□□□□□ -0.44
PCDHGA1-201ENST00000378105 GUCY1B3Q02153 619 aa12.32□□□□□ -0.44
PCDHGA1-201ENST00000378105 C3orf20Q8ND61 904 aa12.32□□□□□ -0.44
PCDHGA1-201ENST00000378105 CRACR2AQ9BSW2 395 aa12.32□□□□□ -0.44
PCDHGA1-201ENST00000378105 LMCD1Q9NZU5 365 aa12.32□□□□□ -0.44
PCDHGA1-201ENST00000378105 CACNA1SQ13698 1873 aa12.32□□□□□ -0.44
PCDHGA1-201ENST00000378105 ABCC4O15439 1325 aa12.32□□□□□ -0.44
PCDHGA1-201ENST00000378105 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.32□□□□□ -0.44
PCDHGA1-201ENST00000378105 NMIQ13287 307 aaPredicted RBP12.32□□□□□ -0.44
PCDHGA1-201ENST00000378105 FMNL3Q8IVF7 1028 aa12.32□□□□□ -0.44
PCDHGA1-201ENST00000378105 EXOC8Q8IYI6 725 aa12.32□□□□□ -0.44
PCDHGA1-201ENST00000378105 SPTLC3Q9NUV7 552 aa12.32□□□□□ -0.44
PCDHGA1-201ENST00000378105 XBP1P17861 261 aa12.32□□□□□ -0.44
PCDHGA1-201ENST00000378105 PTGS1P23219 599 aa12.32□□□□□ -0.44
PCDHGA1-201ENST00000378105 TTF1Q15361 905 aaPredicted RBP12.32□□□□□ -0.44
PCDHGA1-201ENST00000378105 TRIM22Q8IYM9 498 aa12.32□□□□□ -0.44
PCDHGA1-201ENST00000378105 GOLGA5Q8TBA6 731 aa12.32□□□□□ -0.44
PCDHGA1-201ENST00000378105 SH3GL3Q99963 347 aa12.32□□□□□ -0.44
PCDHGA1-201ENST00000378105 TRMT1Q9NXH9 659 aaKnown RBP12.32□□□□□ -0.44
PCDHGA1-201ENST00000378105 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.32□□□□□ -0.44
PCDHGA1-201ENST00000378105 LGR5O75473 907 aa12.32□□□□□ -0.44
PCDHGA1-201ENST00000378105 RDXP35241 583 aaKnown RBP12.32□□□□□ -0.44
PCDHGA1-201ENST00000378105 SCNN1BP51168 640 aa12.32□□□□□ -0.44
PCDHGA1-201ENST00000378105 RPS6KA3P51812 740 aa12.32□□□□□ -0.44
PCDHGA1-201ENST00000378105 PICALMQ13492 652 aa12.32□□□□□ -0.44
PCDHGA1-201ENST00000378105 RBBP5Q15291 538 aaKnown RBP12.32□□□□□ -0.44
PCDHGA1-201ENST00000378105 ANKRD1Q15327 319 aa12.32□□□□□ -0.44
PCDHGA1-201ENST00000378105 CCDC181Q5TID7 509 aa12.32□□□□□ -0.44
PCDHGA1-201ENST00000378105 ZNF280DQ6N043 979 aa12.32□□□□□ -0.44
PCDHGA1-201ENST00000378105 KCNF1Q9H3M0 494 aa12.32□□□□□ -0.44
PCDHGA1-201ENST00000378105 MYO5AQ9Y4I1 1855 aaKnown RBP12.31□□□□□ -0.44
PCDHGA1-201ENST00000378105 SMTNL1A8MU46 457 aa12.31□□□□□ -0.44
PCDHGA1-201ENST00000378105 UFL1O94874 794 aa12.31□□□□□ -0.44
PCDHGA1-201ENST00000378105 PYGBP11216 843 aa12.31□□□□□ -0.44
PCDHGA1-201ENST00000378105 TNNI3KQ59H18 835 aa12.31□□□□□ -0.44
PCDHGA1-201ENST00000378105 NAA16Q6N069 864 aaPredicted RBP12.31□□□□□ -0.44
PCDHGA1-201ENST00000378105 MICAL1Q8TDZ2 1067 aa12.31□□□□□ -0.44
PCDHGA1-201ENST00000378105 GDPD2Q9HCC8 539 aa12.31□□□□□ -0.44
PCDHGA1-201ENST00000378105 LMBRD1Q9NUN5 540 aa12.31□□□□□ -0.44
PCDHGA1-201ENST00000378105 CHCHD3Q9NX63 227 aaKnown RBP12.31□□□□□ -0.44
PCDHGA1-201ENST00000378105 FPGT-TNNI3KV9GXZ4 949 aa12.31□□□□□ -0.44
PCDHGA1-201ENST00000378105 TMEM62Q0P6H9 643 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms