RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 AMOTL1Q8IY63 956 aa25.32■■□□□ 1.64
CBWD3-202ENST00000377342 DYNLL2Q96FJ2 89 aa25.32■■□□□ 1.64
CBWD3-202ENST00000377342 EHD4Q9H223 541 aa25.32■■□□□ 1.64
CBWD3-202ENST00000377342 DNAJC18Q9H819 358 aa25.32■■□□□ 1.64
CBWD3-202ENST00000377342 GPBP1L1Q9HC44 474 aaPredicted RBP25.32■■□□□ 1.64
CBWD3-202ENST00000377342 PPP2R3BQ9Y5P8 575 aa25.32■■□□□ 1.64
CBWD3-202ENST00000377342 KRT26Q7Z3Y9 468 aa25.31■■□□□ 1.64
CBWD3-202ENST00000377342 SULF1Q8IWU6 871 aa25.31■■□□□ 1.64
CBWD3-202ENST00000377342 SLC44A5Q8NCS7 719 aa25.31■■□□□ 1.64
CBWD3-202ENST00000377342 HLA-DOAP06340 250 aa25.3■■□□□ 1.64
CBWD3-202ENST00000377342 MCCP23508 829 aa25.3■■□□□ 1.64
CBWD3-202ENST00000377342 RNF20Q5VTR2 975 aa25.3■■□□□ 1.64
CBWD3-202ENST00000377342 PRAMEF18Q5VWM3 479 aa25.3■■□□□ 1.64
CBWD3-202ENST00000377342 METTL16Q86W50 562 aaKnown RBP25.3■■□□□ 1.64
CBWD3-202ENST00000377342 STK11IPQ8N1F8 1099 aa25.3■■□□□ 1.64
CBWD3-202ENST00000377342 PI4KBQ9UBF8 816 aa25.3■■□□□ 1.64
CBWD3-202ENST00000377342 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.3■■□□□ 1.64
CBWD3-202ENST00000377342 NEDD4P46934 1319 aa25.3■■□□□ 1.64
CBWD3-202ENST00000377342 FAM196BA6NMK8 535 aa25.29■■□□□ 1.64
CBWD3-202ENST00000377342 COL9A3Q14050 684 aaPredicted RBP25.29■■□□□ 1.64
CBWD3-202ENST00000377342 TSGA10IPQ3SY00 556 aa25.29■■□□□ 1.64
CBWD3-202ENST00000377342 MAP1SQ66K74 1059 aaPredicted RBP25.29■■□□□ 1.64
CBWD3-202ENST00000377342 C16orf86Q6ZW13 317 aa25.29■■□□□ 1.64
CBWD3-202ENST00000377342 NKX2-3Q8TAU0 364 aa25.29■■□□□ 1.64
CBWD3-202ENST00000377342 STAG1Q8WVM7 1258 aa25.29■■□□□ 1.64
CBWD3-202ENST00000377342 IL17RAQ96F46 866 aa25.29■■□□□ 1.64
CBWD3-202ENST00000377342 GLIS2Q9BZE0 524 aaPredicted RBP25.29■■□□□ 1.64
CBWD3-202ENST00000377342 INCENPQ9NQS7 918 aa25.29■■□□□ 1.64
CBWD3-202ENST00000377342 SERPINB13Q9UIV8 391 aa25.29■■□□□ 1.64
CBWD3-202ENST00000377342 CLEC11AQ9Y240 323 aa25.29■■□□□ 1.64
CBWD3-202ENST00000377342 GREB1LQ9C091 1923 aaPredicted RBP25.29■■□□□ 1.64
CBWD3-202ENST00000377342 OTOFQ9HC10 1997 aa25.29■■□□□ 1.64
CBWD3-202ENST00000377342 NBPF12Q5TAG4 269 aaPredicted RBP25.29■■□□□ 1.64
CBWD3-202ENST00000377342 ATAD5Q96QE3 1844 aa25.28■■□□□ 1.64
CBWD3-202ENST00000377342 E7EWF7 191 aa25.28■■□□□ 1.64
CBWD3-202ENST00000377342 KIF3CO14782 793 aa25.28■■□□□ 1.64
CBWD3-202ENST00000377342 FGRP09769 529 aa25.28■■□□□ 1.64
CBWD3-202ENST00000377342 ADCK5Q3MIX3 580 aa25.28■■□□□ 1.64
CBWD3-202ENST00000377342 AKNAD1Q5T1N1 836 aa25.28■■□□□ 1.64
CBWD3-202ENST00000377342 USP48Q86UV5 1035 aa25.28■■□□□ 1.64
CBWD3-202ENST00000377342 KIF2CQ99661 725 aa25.28■■□□□ 1.64
CBWD3-202ENST00000377342 YY1P25490 414 aa25.27■■□□□ 1.64
CBWD3-202ENST00000377342 ANAPC15P60006 121 aa25.27■■□□□ 1.64
CBWD3-202ENST00000377342 ZKSCAN1P17029 563 aaPredicted RBP25.26■■□□□ 1.63
CBWD3-202ENST00000377342 PRDM1O75626 825 aa25.26■■□□□ 1.63
CBWD3-202ENST00000377342 SHMT1P34896 483 aa25.26■■□□□ 1.63
CBWD3-202ENST00000377342 CDK8P49336 464 aa25.26■■□□□ 1.63
CBWD3-202ENST00000377342 CDC37L1Q7L3B6 337 aa25.26■■□□□ 1.63
CBWD3-202ENST00000377342 CDCA5Q96FF9 252 aa25.26■■□□□ 1.63
CBWD3-202ENST00000377342 MAP3K10Q02779 954 aa25.25■■□□□ 1.63
CBWD3-202ENST00000377342 FOXP4Q8IVH2 680 aaPredicted RBP25.25■■□□□ 1.63
CBWD3-202ENST00000377342 TRPM7Q96QT4 1865 aa25.24■■□□□ 1.63
CBWD3-202ENST00000377342 ORC4O43929 436 aa25.24■■□□□ 1.63
CBWD3-202ENST00000377342 SLC3A2P08195 630 aaKnown RBP25.24■■□□□ 1.63
CBWD3-202ENST00000377342 MFSD6Q6ZSS7 791 aa25.24■■□□□ 1.63
CBWD3-202ENST00000377342 CRACR2BQ8N4Y2 399 aaPredicted RBP25.24■■□□□ 1.63
CBWD3-202ENST00000377342 SWAP70Q9UH65 585 aa25.24■■□□□ 1.63
CBWD3-202ENST00000377342 HERC5Q9UII4 1024 aaKnown RBP25.24■■□□□ 1.63
CBWD3-202ENST00000377342 DOCK1Q14185 1865 aa25.24■■□□□ 1.63
CBWD3-202ENST00000377342 TBC1D12O60347 775 aa25.23■■□□□ 1.63
CBWD3-202ENST00000377342 PCP11498 1178 aaKnown RBP25.23■■□□□ 1.63
CBWD3-202ENST00000377342 RASA1P20936 1047 aa25.23■■□□□ 1.63
CBWD3-202ENST00000377342 MIGA2Q7L4E1 593 aa25.23■■□□□ 1.63
CBWD3-202ENST00000377342 ZNF784Q8NCA9 323 aaPredicted RBP25.23■■□□□ 1.63
CBWD3-202ENST00000377342 RNF41Q9H4P4 317 aaPredicted RBP25.23■■□□□ 1.63
CBWD3-202ENST00000377342 TRAF5O00463 557 aa25.23■■□□□ 1.63
CBWD3-202ENST00000377342 PDE4BQ07343 736 aa25.23■■□□□ 1.63
CBWD3-202ENST00000377342 KRT32Q14532 448 aa25.23■■□□□ 1.63
CBWD3-202ENST00000377342 TATDN1Q6P1N9 297 aa25.23■■□□□ 1.63
CBWD3-202ENST00000377342 JAKMIP1Q96N16 626 aaKnown RBP25.23■■□□□ 1.63
CBWD3-202ENST00000377342 TAOK2Q9UL54 1235 aa25.23■■□□□ 1.63
CBWD3-202ENST00000377342 B4E1Z4 1266 aa25.22■■□□□ 1.63
CBWD3-202ENST00000377342 FMR1Q06787 632 aaKnown RBP eCLIP25.22■■□□□ 1.63
CBWD3-202ENST00000377342 RRP1BQ14684 758 aaKnown RBP25.22■■□□□ 1.63
CBWD3-202ENST00000377342 CHADLQ6NUI6 762 aa25.22■■□□□ 1.63
CBWD3-202ENST00000377342 MB21D2Q8IYB1 491 aaPredicted RBP25.22■■□□□ 1.63
CBWD3-202ENST00000377342 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.21■■□□□ 1.63
CBWD3-202ENST00000377342 FZD1Q9UP38 647 aa25.21■■□□□ 1.63
CBWD3-202ENST00000377342 RRP12Q5JTH9 1297 aaKnown RBP25.2■■□□□ 1.63
CBWD3-202ENST00000377342 NCOA7Q8NI08 942 aa25.2■■□□□ 1.63
CBWD3-202ENST00000377342 CNNM2Q9H8M5 875 aa25.2■■□□□ 1.63
CBWD3-202ENST00000377342 CPA1P15085 419 aa25.2■■□□□ 1.62
CBWD3-202ENST00000377342 SHROOM1Q2M3G4 852 aaPredicted RBP25.2■■□□□ 1.62
CBWD3-202ENST00000377342 SUPT20HL1Q3ZLR7 823 aa25.2■■□□□ 1.62
CBWD3-202ENST00000377342 NEK1Q96PY6 1258 aa25.2■■□□□ 1.62
CBWD3-202ENST00000377342 TRIM34Q9BYJ4 488 aa25.2■■□□□ 1.62
CBWD3-202ENST00000377342 TOMM22Q9NS69 142 aa25.2■■□□□ 1.62
CBWD3-202ENST00000377342 PHF20L1A8MW92 1017 aa25.19■■□□□ 1.62
CBWD3-202ENST00000377342 KDM4AO75164 1064 aa25.19■■□□□ 1.62
CBWD3-202ENST00000377342 ITGBL1O95965 494 aaPredicted RBP25.19■■□□□ 1.62
CBWD3-202ENST00000377342 ANTXR2P58335 489 aa25.19■■□□□ 1.62
CBWD3-202ENST00000377342 CYB5R4Q7L1T6 521 aa25.19■■□□□ 1.62
CBWD3-202ENST00000377342 HOOK2Q96ED9 719 aa25.19■■□□□ 1.62
CBWD3-202ENST00000377342 TM6SF1Q9BZW5 370 aa25.19■■□□□ 1.62
CBWD3-202ENST00000377342 KRT23Q9C075 422 aa25.19■■□□□ 1.62
CBWD3-202ENST00000377342 MKNK2Q9HBH9 465 aa25.19■■□□□ 1.62
CBWD3-202ENST00000377342 PLIN4Q96Q06 1357 aa25.18■■□□□ 1.62
CBWD3-202ENST00000377342 CASTP20810 708 aaKnown RBP25.18■■□□□ 1.62
CBWD3-202ENST00000377342 DCAF15Q66K64 600 aa25.18■■□□□ 1.62
CBWD3-202ENST00000377342 RALYLQ86SE5 291 aaKnown RBP25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms