RNA–Protein interactions for RNA: ENST00000376619.6

HDAC6-203, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,179 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-203ENST00000376619 ARHGAP29Q52LW3 1261 aa12.72□□□□□ -0.37
HDAC6-203ENST00000376619 FANCBQ8NB91 859 aa12.72□□□□□ -0.37
HDAC6-203ENST00000376619 CDCA7Q9BWT1 371 aaPredicted RBP12.72□□□□□ -0.37
HDAC6-203ENST00000376619 NEDD4P46934 1319 aa12.72□□□□□ -0.37
HDAC6-203ENST00000376619 A0A0U1RQG5 324 aaPredicted RBP12.72□□□□□ -0.37
HDAC6-203ENST00000376619 ERICH4A6NGS2 130 aa12.72□□□□□ -0.37
HDAC6-203ENST00000376619 PHLPP1O60346 1717 aa12.72□□□□□ -0.37
HDAC6-203ENST00000376619 ZNF75DP51815 510 aa12.72□□□□□ -0.37
HDAC6-203ENST00000376619 EN1Q05925 392 aaPredicted RBP12.72□□□□□ -0.37
HDAC6-203ENST00000376619 CAGE1Q8TC20 777 aa12.72□□□□□ -0.37
HDAC6-203ENST00000376619 HINFPQ9BQA5 517 aa12.72□□□□□ -0.37
HDAC6-203ENST00000376619 ISCA1Q9BUE6 129 aa12.72□□□□□ -0.37
HDAC6-203ENST00000376619 MMRN2Q9H8L6 949 aa12.72□□□□□ -0.37
HDAC6-203ENST00000376619 GUCY1A2P33402 732 aa12.72□□□□□ -0.37
HDAC6-203ENST00000376619 SNW1Q13573 536 aaKnown RBP12.72□□□□□ -0.37
HDAC6-203ENST00000376619 NOM1Q5C9Z4 860 aaKnown RBP12.72□□□□□ -0.37
HDAC6-203ENST00000376619 TBC1D9BQ66K14 1250 aa12.72□□□□□ -0.37
HDAC6-203ENST00000376619 MARCH10Q8NA82 808 aaPredicted RBP12.72□□□□□ -0.37
HDAC6-203ENST00000376619 KIF18AQ8NI77 898 aa12.72□□□□□ -0.37
HDAC6-203ENST00000376619 ZNF274Q96GC6 653 aaPredicted RBP12.72□□□□□ -0.37
HDAC6-203ENST00000376619 MROH5Q6ZUA9 1318 aa12.72□□□□□ -0.37
HDAC6-203ENST00000376619 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.71□□□□□ -0.37
HDAC6-203ENST00000376619 ATP1A3P13637 1013 aa12.71□□□□□ -0.37
HDAC6-203ENST00000376619 CACNB3P54284 484 aa12.71□□□□□ -0.37
HDAC6-203ENST00000376619 RESTQ13127 1097 aa12.71□□□□□ -0.37
HDAC6-203ENST00000376619 ITPK1Q13572 414 aa12.71□□□□□ -0.37
HDAC6-203ENST00000376619 PPP1R9BQ96SB3 815 aa12.71□□□□□ -0.37
HDAC6-203ENST00000376619 STRBPQ96SI9 672 aaKnown RBP12.71□□□□□ -0.37
HDAC6-203ENST00000376619 DEF6Q9H4E7 631 aa12.71□□□□□ -0.37
HDAC6-203ENST00000376619 RIOK3O14730 519 aaKnown RBP12.71□□□□□ -0.37
HDAC6-203ENST00000376619 EPB41L2O43491 1005 aaKnown RBP12.71□□□□□ -0.37
HDAC6-203ENST00000376619 ARID5AQ03989 594 aa12.71□□□□□ -0.37
HDAC6-203ENST00000376619 MFSD14BQ5SR56 506 aa12.71□□□□□ -0.37
HDAC6-203ENST00000376619 FKBP15Q5T1M5 1219 aa12.71□□□□□ -0.37
HDAC6-203ENST00000376619 KIAA0825Q8IV33 1275 aa12.71□□□□□ -0.37
HDAC6-203ENST00000376619 GOLPH3LQ9H4A5 285 aa12.71□□□□□ -0.37
HDAC6-203ENST00000376619 STRCP1A6NGW2 1772 aa12.71□□□□□ -0.37
HDAC6-203ENST00000376619 PDIA4P13667 645 aaKnown RBP12.71□□□□□ -0.38
HDAC6-203ENST00000376619 ADKP55263 362 aaKnown RBP12.71□□□□□ -0.38
HDAC6-203ENST00000376619 FAM193AP78312 1265 aa12.71□□□□□ -0.38
HDAC6-203ENST00000376619 FNBP4Q8N3X1 1017 aaPredicted RBP12.71□□□□□ -0.38
HDAC6-203ENST00000376619 PKD2L1Q9P0L9 805 aa12.71□□□□□ -0.38
HDAC6-203ENST00000376619 RPAP1Q9BWH6 1393 aaPredicted RBP12.71□□□□□ -0.38
HDAC6-203ENST00000376619 KLRK1P26718 216 aa12.7□□□□□ -0.38
HDAC6-203ENST00000376619 KIF5BP33176 963 aa12.7□□□□□ -0.38
HDAC6-203ENST00000376619 ST5P78524 1137 aa12.7□□□□□ -0.38
HDAC6-203ENST00000376619 RABL6Q3YEC7 729 aaPredicted RBP12.7□□□□□ -0.38
HDAC6-203ENST00000376619 TMEM87BQ96K49 555 aa12.7□□□□□ -0.38
HDAC6-203ENST00000376619 TRERF1Q96PN7 1200 aa12.7□□□□□ -0.38
HDAC6-203ENST00000376619 LLPHQ9BRT6 129 aaKnown RBP12.7□□□□□ -0.38
HDAC6-203ENST00000376619 NFE2L3Q9Y4A8 694 aa12.7□□□□□ -0.38
HDAC6-203ENST00000376619 RIPOR2Q9Y4F9 1068 aa12.7□□□□□ -0.38
HDAC6-203ENST00000376619 FRMPD2Q68DX3 1309 aaPredicted RBP12.7□□□□□ -0.38
HDAC6-203ENST00000376619 NALCNQ8IZF0 1738 aa12.7□□□□□ -0.38
HDAC6-203ENST00000376619 USP17L3A6NCW0 530 aa12.7□□□□□ -0.38
HDAC6-203ENST00000376619 USP17L4A6NCW7 530 aa12.7□□□□□ -0.38
HDAC6-203ENST00000376619 FAM196BA6NMK8 535 aa12.7□□□□□ -0.38
HDAC6-203ENST00000376619 POLR3GO15318 223 aaPredicted RBP12.7□□□□□ -0.38
HDAC6-203ENST00000376619 STAT6P42226 847 aa12.7□□□□□ -0.38
HDAC6-203ENST00000376619 USP17L1Q7RTZ2 530 aa12.7□□□□□ -0.38
HDAC6-203ENST00000376619 UBXN4Q92575 508 aa12.7□□□□□ -0.38
HDAC6-203ENST00000376619 VEZTQ9HBM0 779 aa12.7□□□□□ -0.38
HDAC6-203ENST00000376619 PLEKHA8P1O95397 391 aa12.7□□□□□ -0.38
HDAC6-203ENST00000376619 BRAPQ7Z569 592 aa12.7□□□□□ -0.38
HDAC6-203ENST00000376619 LRRC47Q8N1G4 583 aaKnown RBP12.7□□□□□ -0.38
HDAC6-203ENST00000376619 OXER1Q8TDS5 423 aa12.7□□□□□ -0.38
HDAC6-203ENST00000376619 ZFP91Q96JP5 570 aaPredicted RBP12.7□□□□□ -0.38
HDAC6-203ENST00000376619 PCDHA5Q9Y5H7 936 aa12.7□□□□□ -0.38
HDAC6-203ENST00000376619 SPATA31A1Q5TZJ5 1347 aa12.7□□□□□ -0.38
HDAC6-203ENST00000376619 XRN1Q8IZH2 1706 aaKnown RBP12.7□□□□□ -0.38
HDAC6-203ENST00000376619 PSDA5PKW4 1024 aaPredicted RBP12.7□□□□□ -0.38
HDAC6-203ENST00000376619 FOXN1O15353 648 aa12.7□□□□□ -0.38
HDAC6-203ENST00000376619 KRT2P35908 639 aa12.7□□□□□ -0.38
HDAC6-203ENST00000376619 NAA30Q147X3 362 aaPredicted RBP12.7□□□□□ -0.38
HDAC6-203ENST00000376619 KIF4BQ2VIQ3 1234 aa12.7□□□□□ -0.38
HDAC6-203ENST00000376619 TMTC2Q8N394 836 aa12.7□□□□□ -0.38
HDAC6-203ENST00000376619 FANCLQ9NW38 375 aa12.7□□□□□ -0.38
HDAC6-203ENST00000376619 KIAA1468Q9P260 1216 aa12.7□□□□□ -0.38
HDAC6-203ENST00000376619 ZHX1Q9UKY1 873 aaPredicted RBP12.7□□□□□ -0.38
HDAC6-203ENST00000376619 PALLDQ8WX93 1383 aa12.69□□□□□ -0.38
HDAC6-203ENST00000376619 FAM205CA6NFA0 338 aa12.69□□□□□ -0.38
HDAC6-203ENST00000376619 TXKP42681 527 aa12.69□□□□□ -0.38
HDAC6-203ENST00000376619 MATR3P43243 847 aaKnown RBP eCLIP12.69□□□□□ -0.38
HDAC6-203ENST00000376619 ST3GAL1Q11201 340 aa12.69□□□□□ -0.38
HDAC6-203ENST00000376619 MAPK8IP2Q13387 824 aaPredicted RBP12.69□□□□□ -0.38
HDAC6-203ENST00000376619 CACTINQ8WUQ7 758 aaKnown RBP12.69□□□□□ -0.38
HDAC6-203ENST00000376619 TRIM47Q96LD4 638 aa12.69□□□□□ -0.38
HDAC6-203ENST00000376619 DESI2Q9BSY9 194 aa12.69□□□□□ -0.38
HDAC6-203ENST00000376619 PCDHB6Q9Y5E3 794 aa12.69□□□□□ -0.38
HDAC6-203ENST00000376619 KDM6AO15550 1401 aaPredicted RBP12.69□□□□□ -0.38
HDAC6-203ENST00000376619 KIF28PB7ZC32 967 aa12.69□□□□□ -0.38
HDAC6-203ENST00000376619 SPATA31A5Q5VU36 1347 aa12.69□□□□□ -0.38
HDAC6-203ENST00000376619 SPATA31A7Q8IWB4 1347 aa12.69□□□□□ -0.38
HDAC6-203ENST00000376619 CBFA2T2O43439 604 aa12.69□□□□□ -0.38
HDAC6-203ENST00000376619 CIAO1O76071 339 aa12.69□□□□□ -0.38
HDAC6-203ENST00000376619 LDHCP07864 332 aa12.69□□□□□ -0.38
HDAC6-203ENST00000376619 FANCCQ00597 558 aa12.69□□□□□ -0.38
HDAC6-203ENST00000376619 TBC1D7Q9P0N9 293 aa12.69□□□□□ -0.38
HDAC6-203ENST00000376619 MTIF2P46199 727 aaKnown RBP12.68□□□□□ -0.38
HDAC6-203ENST00000376619 EPSTI1Q96J88 318 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms