RNA–Protein interactions for RNA: ENST00000376233.7

ZNF549-202, Transcript of zinc finger protein 549, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF549, Length 4,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549-202ENST00000376233 PARP10Q53GL7 1025 aa12.1□□□□□ -0.47
ZNF549-202ENST00000376233 KANK3Q6NY19 840 aa12.1□□□□□ -0.47
ZNF549-202ENST00000376233 KRBA2Q6ZNG9 492 aa12.1□□□□□ -0.47
ZNF549-202ENST00000376233 FMN2Q9NZ56 1722 aa12.1□□□□□ -0.47
ZNF549-202ENST00000376233 SSBP05455 408 aaKnown RBP eCLIP12.1□□□□□ -0.47
ZNF549-202ENST00000376233 SOGA3Q5TF21 947 aa12.1□□□□□ -0.47
ZNF549-202ENST00000376233 DHX40Q8IX18 779 aaKnown RBP12.1□□□□□ -0.47
ZNF549-202ENST00000376233 TMX4Q9H1E5 349 aaPredicted RBP12.1□□□□□ -0.47
ZNF549-202ENST00000376233 HEATR3Q7Z4Q2 680 aa12.09□□□□□ -0.47
ZNF549-202ENST00000376233 NFAT5O94916 1531 aa12.09□□□□□ -0.47
ZNF549-202ENST00000376233 UBA7P41226 1012 aa12.09□□□□□ -0.47
ZNF549-202ENST00000376233 EIF5P55010 431 aaKnown RBP12.09□□□□□ -0.47
ZNF549-202ENST00000376233 RBM6P78332 1123 aaKnown RBP12.09□□□□□ -0.47
ZNF549-202ENST00000376233 CDK5RAP3Q96JB5 506 aa12.09□□□□□ -0.47
ZNF549-202ENST00000376233 BAG1Q99933 345 aaPredicted RBP12.09□□□□□ -0.47
ZNF549-202ENST00000376233 BLZF1Q9H2G9 400 aa12.09□□□□□ -0.47
ZNF549-202ENST00000376233 HPS5Q9UPZ3 1129 aa12.09□□□□□ -0.47
ZNF549-202ENST00000376233 FOXN1O15353 648 aa12.09□□□□□ -0.47
ZNF549-202ENST00000376233 GUCY1A2P33402 732 aa12.09□□□□□ -0.47
ZNF549-202ENST00000376233 NAP1L1P55209 391 aaKnown RBP12.09□□□□□ -0.47
ZNF549-202ENST00000376233 LRP10Q7Z4F1 713 aa12.09□□□□□ -0.47
ZNF549-202ENST00000376233 PCDHB6Q9Y5E3 794 aa12.09□□□□□ -0.47
ZNF549-202ENST00000376233 TRIM28Q13263 835 aaKnown RBP12.08□□□□□ -0.48
ZNF549-202ENST00000376233 STIM1Q13586 685 aa12.08□□□□□ -0.48
ZNF549-202ENST00000376233 ERCC6LQ2NKX8 1250 aa12.08□□□□□ -0.48
ZNF549-202ENST00000376233 DESI2Q9BSY9 194 aa12.08□□□□□ -0.48
ZNF549-202ENST00000376233 RNF216Q9NWF9 866 aaPredicted RBP12.08□□□□□ -0.48
ZNF549-202ENST00000376233 IMPACTQ9P2X3 320 aa12.08□□□□□ -0.48
ZNF549-202ENST00000376233 OVOS2A0A0G2JMS6 1433 aa12.08□□□□□ -0.48
ZNF549-202ENST00000376233 RTL9Q8NET4 1388 aa12.08□□□□□ -0.48
ZNF549-202ENST00000376233 A0A0U1RQG5 324 aaPredicted RBP12.08□□□□□ -0.48
ZNF549-202ENST00000376233 FAM98CQ17RN3 349 aaKnown RBP12.08□□□□□ -0.48
ZNF549-202ENST00000376233 MEX3CQ5U5Q3 659 aaKnown RBP12.08□□□□□ -0.48
ZNF549-202ENST00000376233 C8orf37Q96NL8 207 aa12.08□□□□□ -0.48
ZNF549-202ENST00000376233 KIF5CO60282 957 aa12.08□□□□□ -0.48
ZNF549-202ENST00000376233 KIF5BP33176 963 aa12.08□□□□□ -0.48
ZNF549-202ENST00000376233 SMYD4Q8IYR2 804 aaPredicted RBP12.08□□□□□ -0.48
ZNF549-202ENST00000376233 GNPATO15228 680 aa12.07□□□□□ -0.48
ZNF549-202ENST00000376233 CSF1RP07333 972 aa12.07□□□□□ -0.48
ZNF549-202ENST00000376233 TSPY3P0CV98 308 aa12.07□□□□□ -0.48
ZNF549-202ENST00000376233 TSPY8P0CW00 308 aa12.07□□□□□ -0.48
ZNF549-202ENST00000376233 CASP1P29466 404 aa12.07□□□□□ -0.48
ZNF549-202ENST00000376233 CAGE1Q8TC20 777 aa12.07□□□□□ -0.48
ZNF549-202ENST00000376233 CARD6Q9BX69 1037 aa12.07□□□□□ -0.48
ZNF549-202ENST00000376233 ZHX3Q9H4I2 956 aa12.07□□□□□ -0.48
ZNF549-202ENST00000376233 LY9Q9HBG7 655 aa12.07□□□□□ -0.48
ZNF549-202ENST00000376233 SAP30BPQ9UHR5 308 aaKnown RBP12.07□□□□□ -0.48
ZNF549-202ENST00000376233 FAM208AQ9UK61 1670 aaKnown RBP12.07□□□□□ -0.48
ZNF549-202ENST00000376233 FAM182BQ5T319 152 aa12.07□□□□□ -0.48
ZNF549-202ENST00000376233 VPS16Q9H269 839 aa12.07□□□□□ -0.48
ZNF549-202ENST00000376233 CDC25BP30305 580 aa12.07□□□□□ -0.48
ZNF549-202ENST00000376233 STAT6P42226 847 aa12.07□□□□□ -0.48
ZNF549-202ENST00000376233 SHC4Q6S5L8 630 aa12.07□□□□□ -0.48
ZNF549-202ENST00000376233 ZNF397Q8NF99 534 aaPredicted RBP12.07□□□□□ -0.48
ZNF549-202ENST00000376233 ENGASEQ8NFI3 743 aa12.07□□□□□ -0.48
ZNF549-202ENST00000376233 OXER1Q8TDS5 423 aa12.07□□□□□ -0.48
ZNF549-202ENST00000376233 ERO1AQ96HE7 468 aa12.07□□□□□ -0.48
ZNF549-202ENST00000376233 CSRNP2Q9H175 543 aa12.07□□□□□ -0.48
ZNF549-202ENST00000376233 LTN1O94822 1766 aa12.07□□□□□ -0.48
ZNF549-202ENST00000376233 RGPD1P0DJD0 1748 aa12.06□□□□□ -0.48
ZNF549-202ENST00000376233 HIBADHP31937 336 aaKnown RBP12.06□□□□□ -0.48
ZNF549-202ENST00000376233 IKQ13123 557 aaPredicted RBP12.06□□□□□ -0.48
ZNF549-202ENST00000376233 TTC38Q5R3I4 469 aa12.06□□□□□ -0.48
ZNF549-202ENST00000376233 SARM1Q6SZW1 724 aa12.06□□□□□ -0.48
ZNF549-202ENST00000376233 EEF2KMTQ96G04 330 aa12.06□□□□□ -0.48
ZNF549-202ENST00000376233 UBN2Q6ZU65 1347 aa12.06□□□□□ -0.48
ZNF549-202ENST00000376233 F8W031 263 aaPredicted RBP12.06□□□□□ -0.48
ZNF549-202ENST00000376233 FMNL1O95466 1100 aaPredicted RBP12.06□□□□□ -0.48
ZNF549-202ENST00000376233 IFNAR1P17181 557 aa12.06□□□□□ -0.48
ZNF549-202ENST00000376233 CTNND2Q9UQB3 1225 aa12.06□□□□□ -0.48
ZNF549-202ENST00000376233 TOPAZ1Q8N9V7 1692 aa12.06□□□□□ -0.48
ZNF549-202ENST00000376233 GSG1L2A8MUP6 293 aa12.06□□□□□ -0.48
ZNF549-202ENST00000376233 C6orf229H3BNL8 230 aa12.06□□□□□ -0.48
ZNF549-202ENST00000376233 CDC25AP30304 524 aa12.06□□□□□ -0.48
ZNF549-202ENST00000376233 SKIDA1Q1XH10 827 aa12.06□□□□□ -0.48
ZNF549-202ENST00000376233 ERFEQ4G0M1 354 aa12.06□□□□□ -0.48
ZNF549-202ENST00000376233 ILDR1Q86SU0 546 aaPredicted RBP12.06□□□□□ -0.48
ZNF549-202ENST00000376233 ZSCAN10Q96SZ4 725 aaPredicted RBP12.06□□□□□ -0.48
ZNF549-202ENST00000376233 TANGO6Q9C0B7 1094 aa12.06□□□□□ -0.48
ZNF549-202ENST00000376233 MST1RQ04912 1400 aa12.06□□□□□ -0.48
ZNF549-202ENST00000376233 TMEM232C9JQI7 657 aa12.06□□□□□ -0.48
ZNF549-202ENST00000376233 PPP6R2O75170 966 aa12.06□□□□□ -0.48
ZNF549-202ENST00000376233 MMP1P03956 469 aa12.06□□□□□ -0.48
ZNF549-202ENST00000376233 GPS2Q13227 327 aa12.06□□□□□ -0.48
ZNF549-202ENST00000376233 KRT222Q8N1A0 295 aa12.06□□□□□ -0.48
ZNF549-202ENST00000376233 IGSF22Q8N9C0 903 aa12.06□□□□□ -0.48
ZNF549-202ENST00000376233 PPP1R13BQ96KQ4 1090 aa12.06□□□□□ -0.48
ZNF549-202ENST00000376233 ZNHIT6Q9NWK9 470 aaKnown RBP12.06□□□□□ -0.48
ZNF549-202ENST00000376233 PUF60Q9UHX1 559 aaKnown RBP12.06□□□□□ -0.48
ZNF549-202ENST00000376233 RFC4P35249 363 aa12.05□□□□□ -0.48
ZNF549-202ENST00000376233 GOLGA6L1Q8N7Z2 621 aa12.05□□□□□ -0.48
ZNF549-202ENST00000376233 MLKLQ8NB16 471 aa12.05□□□□□ -0.48
ZNF549-202ENST00000376233 SMARCC1Q92922 1105 aaPredicted RBP12.05□□□□□ -0.48
ZNF549-202ENST00000376233 EPSTI1Q96J88 318 aa12.05□□□□□ -0.48
ZNF549-202ENST00000376233 XRN1Q8IZH2 1706 aaKnown RBP12.05□□□□□ -0.48
ZNF549-202ENST00000376233 CACNA1FO60840 1977 aa12.05□□□□□ -0.48
ZNF549-202ENST00000376233 IDEP14735 1019 aa12.05□□□□□ -0.48
ZNF549-202ENST00000376233 LIFRP42702 1097 aa12.05□□□□□ -0.48
ZNF549-202ENST00000376233 NCBP1Q09161 790 aaKnown RBP12.05□□□□□ -0.48
ZNF549-202ENST00000376233 TPTE2Q6XPS3 522 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms