RNA–Protein interactions for RNA: ENST00000374601.7

TCEA3-201, Transcript of transcription elongation factor A3, humanhuman

TSL 1 (best) BASIC

Gene TCEA3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCEA3-201ENST00000374601 DOCK1Q14185 1865 aa16.67■□□□□ 0.26
TCEA3-201ENST00000374601 TRPM7Q96QT4 1865 aa16.67■□□□□ 0.26
TCEA3-201ENST00000374601 NEDD4P46934 1319 aa16.67■□□□□ 0.26
TCEA3-201ENST00000374601 SLURP2P0DP57 97 aa16.66■□□□□ 0.26
TCEA3-201ENST00000374601 ANAPC15P60006 121 aa16.66■□□□□ 0.26
TCEA3-201ENST00000374601 GABPAQ06546 454 aa16.66■□□□□ 0.26
TCEA3-201ENST00000374601 COL9A3Q14050 684 aaPredicted RBP16.66■□□□□ 0.26
TCEA3-201ENST00000374601 ADCK5Q3MIX3 580 aa16.66■□□□□ 0.26
TCEA3-201ENST00000374601 TTC6Q86TZ1 520 aa16.66■□□□□ 0.26
TCEA3-201ENST00000374601 ZSCAN29Q8IWY8 852 aaPredicted RBP16.66■□□□□ 0.26
TCEA3-201ENST00000374601 AMOTL1Q8IY63 956 aa16.66■□□□□ 0.26
TCEA3-201ENST00000374601 SLC44A5Q8NCS7 719 aa16.66■□□□□ 0.26
TCEA3-201ENST00000374601 NKX2-3Q8TAU0 364 aa16.66■□□□□ 0.26
TCEA3-201ENST00000374601 STAG1Q8WVM7 1258 aa16.66■□□□□ 0.26
TCEA3-201ENST00000374601 EHD4Q9H223 541 aa16.66■□□□□ 0.26
TCEA3-201ENST00000374601 INCENPQ9NQS7 918 aa16.66■□□□□ 0.26
TCEA3-201ENST00000374601 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.66■□□□□ 0.26
TCEA3-201ENST00000374601 ADM5C9JUS6 153 aa16.65■□□□□ 0.26
TCEA3-201ENST00000374601 E7EWF7 191 aa16.65■□□□□ 0.26
TCEA3-201ENST00000374601 HLA-DOAP06340 250 aa16.65■□□□□ 0.26
TCEA3-201ENST00000374601 FGRP09769 529 aa16.65■□□□□ 0.26
TCEA3-201ENST00000374601 ZKSCAN1P17029 563 aaPredicted RBP16.65■□□□□ 0.26
TCEA3-201ENST00000374601 AKNAD1Q5T1N1 836 aa16.65■□□□□ 0.26
TCEA3-201ENST00000374601 C16orf86Q6ZW13 317 aa16.65■□□□□ 0.26
TCEA3-201ENST00000374601 STK11IPQ8N1F8 1099 aa16.65■□□□□ 0.26
TCEA3-201ENST00000374601 DCPSQ96C86 337 aaKnown RBP16.65■□□□□ 0.26
TCEA3-201ENST00000374601 CSRNP1Q96S65 589 aa16.65■□□□□ 0.26
TCEA3-201ENST00000374601 DNAJC18Q9H819 358 aa16.65■□□□□ 0.26
TCEA3-201ENST00000374601 PPP2R3BQ9Y5P8 575 aa16.65■□□□□ 0.26
TCEA3-201ENST00000374601 FAM196BA6NMK8 535 aa16.64■□□□□ 0.25
TCEA3-201ENST00000374601 DLK2Q6UY11 383 aa16.64■□□□□ 0.25
TCEA3-201ENST00000374601 METTL16Q86W50 562 aaKnown RBP16.64■□□□□ 0.25
TCEA3-201ENST00000374601 PI4KBQ9UBF8 816 aa16.64■□□□□ 0.25
TCEA3-201ENST00000374601 SERPINB13Q9UIV8 391 aa16.64■□□□□ 0.25
TCEA3-201ENST00000374601 MYH4Q9Y623 1939 aa16.64■□□□□ 0.25
TCEA3-201ENST00000374601 ORC4O43929 436 aa16.63■□□□□ 0.25
TCEA3-201ENST00000374601 SLC3A2P08195 630 aaKnown RBP16.63■□□□□ 0.25
TCEA3-201ENST00000374601 KRT32Q14532 448 aa16.63■□□□□ 0.25
TCEA3-201ENST00000374601 PRAMEF18Q5VWM3 479 aa16.63■□□□□ 0.25
TCEA3-201ENST00000374601 MFSD6Q6ZSS7 791 aa16.63■□□□□ 0.25
TCEA3-201ENST00000374601 KRT26Q7Z3Y9 468 aa16.63■□□□□ 0.25
TCEA3-201ENST00000374601 LDHDQ86WU2 507 aa16.63■□□□□ 0.25
TCEA3-201ENST00000374601 SULF1Q8IWU6 871 aa16.63■□□□□ 0.25
TCEA3-201ENST00000374601 JAKMIP1Q96N16 626 aaKnown RBP16.63■□□□□ 0.25
TCEA3-201ENST00000374601 PHIPQ8WWQ0 1821 aa16.62■□□□□ 0.25
TCEA3-201ENST00000374601 PRDM1O75626 825 aa16.62■□□□□ 0.25
TCEA3-201ENST00000374601 SHMT1P34896 483 aa16.62■□□□□ 0.25
TCEA3-201ENST00000374601 CDK8P49336 464 aa16.62■□□□□ 0.25
TCEA3-201ENST00000374601 NBPF12Q5TAG4 269 aaPredicted RBP16.62■□□□□ 0.25
TCEA3-201ENST00000374601 MB21D2Q8IYB1 491 aaPredicted RBP16.62■□□□□ 0.25
TCEA3-201ENST00000374601 GLIS2Q9BZE0 524 aaPredicted RBP16.62■□□□□ 0.25
TCEA3-201ENST00000374601 RNF41Q9H4P4 317 aaPredicted RBP16.62■□□□□ 0.25
TCEA3-201ENST00000374601 B4E1Z4 1266 aa16.61■□□□□ 0.25
TCEA3-201ENST00000374601 PCP11498 1178 aaKnown RBP16.61■□□□□ 0.25
TCEA3-201ENST00000374601 CPA1P15085 419 aa16.61■□□□□ 0.25
TCEA3-201ENST00000374601 RASA1P20936 1047 aa16.61■□□□□ 0.25
TCEA3-201ENST00000374601 MAP3K10Q02779 954 aa16.61■□□□□ 0.25
TCEA3-201ENST00000374601 PDE4BQ07343 736 aa16.61■□□□□ 0.25
TCEA3-201ENST00000374601 MAP1SQ66K74 1059 aaPredicted RBP16.61■□□□□ 0.25
TCEA3-201ENST00000374601 USP48Q86UV5 1035 aa16.61■□□□□ 0.25
TCEA3-201ENST00000374601 FOXP4Q8IVH2 680 aaPredicted RBP16.61■□□□□ 0.25
TCEA3-201ENST00000374601 CRACR2BQ8N4Y2 399 aaPredicted RBP16.61■□□□□ 0.25
TCEA3-201ENST00000374601 TM6SF1Q9BZW5 370 aa16.61■□□□□ 0.25
TCEA3-201ENST00000374601 TSHZ2Q9NRE2 1034 aa16.61■□□□□ 0.25
TCEA3-201ENST00000374601 SWAP70Q9UH65 585 aa16.61■□□□□ 0.25
TCEA3-201ENST00000374601 HERC5Q9UII4 1024 aaKnown RBP16.61■□□□□ 0.25
TCEA3-201ENST00000374601 TAOK2Q9UL54 1235 aa16.61■□□□□ 0.25
TCEA3-201ENST00000374601 CLEC11AQ9Y240 323 aa16.61■□□□□ 0.25
TCEA3-201ENST00000374601 TBC1D12O60347 775 aa16.6■□□□□ 0.25
TCEA3-201ENST00000374601 CASTP20810 708 aaKnown RBP16.6■□□□□ 0.25
TCEA3-201ENST00000374601 RRP12Q5JTH9 1297 aaKnown RBP16.6■□□□□ 0.25
TCEA3-201ENST00000374601 CYB5R4Q7L1T6 521 aa16.6■□□□□ 0.25
TCEA3-201ENST00000374601 NCOA7Q8NI08 942 aa16.6■□□□□ 0.25
TCEA3-201ENST00000374601 CDCA5Q96FF9 252 aa16.6■□□□□ 0.25
TCEA3-201ENST00000374601 NEK1Q96PY6 1258 aa16.6■□□□□ 0.25
TCEA3-201ENST00000374601 UPF3BQ9BZI7 483 aaKnown RBP16.6■□□□□ 0.25
TCEA3-201ENST00000374601 KRT23Q9C075 422 aa16.6■□□□□ 0.25
TCEA3-201ENST00000374601 CNNM2Q9H8M5 875 aa16.6■□□□□ 0.25
TCEA3-201ENST00000374601 GPBP1L1Q9HC44 474 aaPredicted RBP16.6■□□□□ 0.25
TCEA3-201ENST00000374601 ZSWIM6Q9HCJ5 1215 aa16.6■□□□□ 0.25
TCEA3-201ENST00000374601 KIF3CO14782 793 aa16.59■□□□□ 0.25
TCEA3-201ENST00000374601 KDM4AO75164 1064 aa16.59■□□□□ 0.25
TCEA3-201ENST00000374601 ANTXR2P58335 489 aa16.59■□□□□ 0.25
TCEA3-201ENST00000374601 RRP1BQ14684 758 aaKnown RBP16.59■□□□□ 0.25
TCEA3-201ENST00000374601 TATDN1Q6P1N9 297 aa16.59■□□□□ 0.25
TCEA3-201ENST00000374601 CDC37L1Q7L3B6 337 aa16.59■□□□□ 0.25
TCEA3-201ENST00000374601 MIGA2Q7L4E1 593 aa16.59■□□□□ 0.25
TCEA3-201ENST00000374601 RALYLQ86SE5 291 aaKnown RBP16.59■□□□□ 0.25
TCEA3-201ENST00000374601 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.59■□□□□ 0.25
TCEA3-201ENST00000374601 TOMM22Q9NS69 142 aa16.59■□□□□ 0.25
TCEA3-201ENST00000374601 PLIN4Q96Q06 1357 aa16.59■□□□□ 0.25
TCEA3-201ENST00000374601 RPS6KB1P23443 525 aa16.58■□□□□ 0.24
TCEA3-201ENST00000374601 PSMA5P28066 241 aa16.58■□□□□ 0.24
TCEA3-201ENST00000374601 EXOSC10Q01780 885 aaKnown RBP16.58■□□□□ 0.24
TCEA3-201ENST00000374601 TRDNQ13061 729 aa16.58■□□□□ 0.24
TCEA3-201ENST00000374601 RABEP1Q15276 862 aa16.58■□□□□ 0.24
TCEA3-201ENST00000374601 SHROOM1Q2M3G4 852 aaPredicted RBP16.58■□□□□ 0.24
TCEA3-201ENST00000374601 BLOC1S2Q6QNY1 142 aa16.58■□□□□ 0.24
TCEA3-201ENST00000374601 TCEANC2Q96MN5 208 aa16.58■□□□□ 0.24
TCEA3-201ENST00000374601 TRIM34Q9BYJ4 488 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms