RNA–Protein interactions for RNA: ENST00000373198.8

PTPRT-206, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRT, Length 12,746 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-206ENST00000373198 RTCBQ9Y3I0 505 aaKnown RBP10.05□□□□□ -0.8
PTPRT-206ENST00000373198 PNMA8AQ86V59 439 aaPredicted RBP10.05□□□□□ -0.8
PTPRT-206ENST00000373198 AFAP1L1Q8TED9 768 aa10.05□□□□□ -0.8
PTPRT-206ENST00000373198 S100BP04271 92 aaPredicted RBP10.05□□□□□ -0.8
PTPRT-206ENST00000373198 SV2BQ7L1I2 683 aa10.05□□□□□ -0.8
PTPRT-206ENST00000373198 CPXCR1Q8N123 301 aa10.05□□□□□ -0.8
PTPRT-206ENST00000373198 YARSP54577 528 aaKnown RBP10.04□□□□□ -0.8
PTPRT-206ENST00000373198 RAD51AP2Q09MP3 1159 aa10.04□□□□□ -0.8
PTPRT-206ENST00000373198 CCDC186Q7Z3E2 898 aa10.04□□□□□ -0.8
PTPRT-206ENST00000373198 NUB1Q9Y5A7 615 aa10.04□□□□□ -0.8
PTPRT-206ENST00000373198 BAG2O95816 211 aa10.04□□□□□ -0.8
PTPRT-206ENST00000373198 HDXQ7Z353 690 aa10.04□□□□□ -0.8
PTPRT-206ENST00000373198 PLEKHA4Q9H4M7 779 aa10.04□□□□□ -0.8
PTPRT-206ENST00000373198 OPHN1O60890 802 aa10.04□□□□□ -0.8
PTPRT-206ENST00000373198 TCIRG1Q13488 830 aa10.04□□□□□ -0.8
PTPRT-206ENST00000373198 CTAGE3PQ8IX95 158 aa10.04□□□□□ -0.8
PTPRT-206ENST00000373198 C9orf84Q5VXU9 1444 aa10.04□□□□□ -0.8
PTPRT-206ENST00000373198 GBP5Q96PP8 586 aa10.04□□□□□ -0.8
PTPRT-206ENST00000373198 ST7Q9NRC1 585 aa10.04□□□□□ -0.8
PTPRT-206ENST00000373198 LONRF3Q496Y0 759 aa10.04□□□□□ -0.8
PTPRT-206ENST00000373198 IFNKQ9P0W0 207 aa10.04□□□□□ -0.8
PTPRT-206ENST00000373198 NBPF3Q9H094 633 aa10.04□□□□□ -0.8
PTPRT-206ENST00000373198 DDX21Q9NR30 783 aaKnown RBP eCLIP10.04□□□□□ -0.8
PTPRT-206ENST00000373198 SMYD2Q9NRG4 433 aa10.04□□□□□ -0.8
PTPRT-206ENST00000373198 NVLO15381 856 aaKnown RBP10.04□□□□□ -0.8
PTPRT-206ENST00000373198 SNRPA1P09661 255 aaKnown RBP10.04□□□□□ -0.8
PTPRT-206ENST00000373198 DNM2P50570 870 aa10.04□□□□□ -0.8
PTPRT-206ENST00000373198 SESN3P58005 492 aa10.04□□□□□ -0.8
PTPRT-206ENST00000373198 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.04□□□□□ -0.8
PTPRT-206ENST00000373198 CNGA4Q8IV77 575 aa10.04□□□□□ -0.8
PTPRT-206ENST00000373198 KRT12Q99456 494 aa10.04□□□□□ -0.8
PTPRT-206ENST00000373198 RSAD2Q8WXG1 361 aa10.04□□□□□ -0.8
PTPRT-206ENST00000373198 PIK3R4Q99570 1358 aa10.04□□□□□ -0.8
PTPRT-206ENST00000373198 ZMAT2Q96NC0 199 aaKnown RBP10.04□□□□□ -0.8
PTPRT-206ENST00000373198 EXOC7Q9UPT5 735 aa10.04□□□□□ -0.8
PTPRT-206ENST00000373198 RAPGEF3O95398 923 aa10.03□□□□□ -0.8
PTPRT-206ENST00000373198 KRT15P19012 456 aa10.03□□□□□ -0.8
PTPRT-206ENST00000373198 KAT6AQ92794 2004 aa10.03□□□□□ -0.8
PTPRT-206ENST00000373198 NR1I2O75469 434 aa10.03□□□□□ -0.8
PTPRT-206ENST00000373198 INPP5BP32019 993 aa10.03□□□□□ -0.8
PTPRT-206ENST00000373198 TRIM50Q86XT4 487 aa10.03□□□□□ -0.8
PTPRT-206ENST00000373198 NOC4LQ9BVI4 516 aaKnown RBP10.03□□□□□ -0.8
PTPRT-206ENST00000373198 CHPF2Q9P2E5 772 aa10.03□□□□□ -0.8
PTPRT-206ENST00000373198 SYT10Q6XYQ8 523 aa10.03□□□□□ -0.8
PTPRT-206ENST00000373198 SND1Q7KZF4 910 aaKnown RBP eCLIP10.03□□□□□ -0.8
PTPRT-206ENST00000373198 SDCCAG3Q96C92 435 aa10.03□□□□□ -0.8
PTPRT-206ENST00000373198 PSMB7Q99436 277 aa10.03□□□□□ -0.8
PTPRT-206ENST00000373198 RBSNQ9H1K0 784 aa10.03□□□□□ -0.8
PTPRT-206ENST00000373198 EFCC1Q9HA90 598 aa10.03□□□□□ -0.8
PTPRT-206ENST00000373198 GCNT3O95395 438 aa10.03□□□□□ -0.8
PTPRT-206ENST00000373198 MCMDC2Q4G0Z9 681 aa10.03□□□□□ -0.8
PTPRT-206ENST00000373198 IFNL2Q8IZJ0 200 aa10.03□□□□□ -0.8
PTPRT-206ENST00000373198 PHF8Q9UPP1 1060 aa10.03□□□□□ -0.8
PTPRT-206ENST00000373198 CAPN9O14815 690 aa10.03□□□□□ -0.8
PTPRT-206ENST00000373198 ZSCAN22P10073 491 aaPredicted RBP10.03□□□□□ -0.8
PTPRT-206ENST00000373198 SLC9A5Q14940 896 aa10.03□□□□□ -0.8
PTPRT-206ENST00000373198 VSIG1Q86XK7 387 aa10.03□□□□□ -0.8
PTPRT-206ENST00000373198 MYLK4Q86YV6 388 aaPredicted RBP10.03□□□□□ -0.8
PTPRT-206ENST00000373198 U2AF2P26368 475 aaKnown RBP eCLIP10.03□□□□□ -0.8
PTPRT-206ENST00000373198 LGSNQ5TDP6 509 aa10.03□□□□□ -0.8
PTPRT-206ENST00000373198 MRPL44Q9H9J2 332 aaKnown RBP10.03□□□□□ -0.8
PTPRT-206ENST00000373198 BRD3Q15059 726 aa10.03□□□□□ -0.8
PTPRT-206ENST00000373198 MMEL1Q495T6 779 aa10.03□□□□□ -0.8
PTPRT-206ENST00000373198 ANKRD13DQ6ZTN6 518 aa10.03□□□□□ -0.8
PTPRT-206ENST00000373198 ARHGAP24Q8N264 748 aa10.03□□□□□ -0.8
PTPRT-206ENST00000373198 PTPRCP08575 1304 aa10.03□□□□□ -0.8
PTPRT-206ENST00000373198 TCP10Q12799 353 aa10.03□□□□□ -0.8
PTPRT-206ENST00000373198 XAGE3Q8WTP9 111 aa10.03□□□□□ -0.8
PTPRT-206ENST00000373198 VPS37BQ9H9H4 285 aa10.03□□□□□ -0.8
PTPRT-206ENST00000373198 ACTN4O43707 911 aaKnown RBP10.03□□□□□ -0.8
PTPRT-206ENST00000373198 CCDC38Q502W7 563 aa10.03□□□□□ -0.8
PTPRT-206ENST00000373198 B4GALNT4Q76KP1 1039 aa10.03□□□□□ -0.8
PTPRT-206ENST00000373198 EYA3Q99504 573 aa10.03□□□□□ -0.8
PTPRT-206ENST00000373198 CCDC68Q9H2F9 335 aa10.03□□□□□ -0.8
PTPRT-206ENST00000373198 SCYL2Q6P3W7 929 aa10.03□□□□□ -0.8
PTPRT-206ENST00000373198 MIER3Q7Z3K6 550 aa10.03□□□□□ -0.8
PTPRT-206ENST00000373198 USP48Q86UV5 1035 aa10.03□□□□□ -0.8
PTPRT-206ENST00000373198 MMS19Q96T76 1030 aa10.03□□□□□ -0.8
PTPRT-206ENST00000373198 ANLNQ9NQW6 1124 aa10.03□□□□□ -0.8
PTPRT-206ENST00000373198 FGD6Q6ZV73 1430 aa10.03□□□□□ -0.8
PTPRT-206ENST00000373198 GCKP35557 465 aa10.02□□□□□ -0.8
PTPRT-206ENST00000373198 PEX19P40855 299 aa10.02□□□□□ -0.8
PTPRT-206ENST00000373198 WHAMMP3Q1A5X7 153 aa10.02□□□□□ -0.8
PTPRT-206ENST00000373198 UBN1Q9NPG3 1134 aa10.02□□□□□ -0.8
PTPRT-206ENST00000373198 UFL1O94874 794 aa10.02□□□□□ -0.8
PTPRT-206ENST00000373198 RBM17Q96I25 401 aaKnown RBP10.02□□□□□ -0.8
PTPRT-206ENST00000373198 PAG1Q9NWQ8 432 aa10.02□□□□□ -0.8
PTPRT-206ENST00000373198 SPTLC2O15270 562 aa10.02□□□□□ -0.81
PTPRT-206ENST00000373198 BEND3Q5T5X7 828 aa10.02□□□□□ -0.81
PTPRT-206ENST00000373198 DENND2CQ68D51 928 aa10.02□□□□□ -0.81
PTPRT-206ENST00000373198 NOP14P78316 857 aaKnown RBP10.02□□□□□ -0.81
PTPRT-206ENST00000373198 P4HA1P13674 534 aa10.02□□□□□ -0.81
PTPRT-206ENST00000373198 DNM1Q05193 864 aaKnown RBP10.02□□□□□ -0.81
PTPRT-206ENST00000373198 C8orf74Q6P047 294 aa10.02□□□□□ -0.81
PTPRT-206ENST00000373198 KLHL7Q8IXQ5 586 aa10.02□□□□□ -0.81
PTPRT-206ENST00000373198 PALM2Q8IXS6 379 aa10.02□□□□□ -0.81
PTPRT-206ENST00000373198 CAVIN2O95810 425 aa10.02□□□□□ -0.81
PTPRT-206ENST00000373198 TNNI1P19237 187 aa10.02□□□□□ -0.81
PTPRT-206ENST00000373198 KRT33BQ14525 404 aa10.02□□□□□ -0.81
PTPRT-206ENST00000373198 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms