RNA–Protein interactions for RNA: ENST00000371750.9

TTC39A-204, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39A, Length 2,021 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-204ENST00000371750 USP48Q86UV5 1035 aa15.56■□□□□ 0.08
TTC39A-204ENST00000371750 PPP2R3BQ9Y5P8 575 aa15.56■□□□□ 0.08
TTC39A-204ENST00000371750 TACC3Q9Y6A5 838 aa15.56■□□□□ 0.08
TTC39A-204ENST00000371750 FAM196BA6NMK8 535 aa15.55■□□□□ 0.08
TTC39A-204ENST00000371750 ZNF213O14771 459 aa15.55■□□□□ 0.08
TTC39A-204ENST00000371750 TTC6Q86TZ1 520 aa15.55■□□□□ 0.08
TTC39A-204ENST00000371750 RASEFQ8IZ41 740 aa15.55■□□□□ 0.08
TTC39A-204ENST00000371750 SLC44A5Q8NCS7 719 aa15.55■□□□□ 0.08
TTC39A-204ENST00000371750 ANAPC4Q9UJX5 808 aa15.55■□□□□ 0.08
TTC39A-204ENST00000371750 NBPF12Q5TAG4 269 aaPredicted RBP15.55■□□□□ 0.08
TTC39A-204ENST00000371750 DNAJC18Q9H819 358 aa15.55■□□□□ 0.08
TTC39A-204ENST00000371750 UPF2Q9HAU5 1272 aaKnown RBP15.55■□□□□ 0.08
TTC39A-204ENST00000371750 PAPPA2Q9BXP8 1791 aa15.54■□□□□ 0.08
TTC39A-204ENST00000371750 NEDD4P46934 1319 aa15.54■□□□□ 0.08
TTC39A-204ENST00000371750 MCCP23508 829 aa15.54■□□□□ 0.08
TTC39A-204ENST00000371750 STOX1Q6ZVD7 989 aa15.54■□□□□ 0.08
TTC39A-204ENST00000371750 ZNF784Q8NCA9 323 aaPredicted RBP15.54■□□□□ 0.08
TTC39A-204ENST00000371750 CDCA5Q96FF9 252 aa15.54■□□□□ 0.08
TTC39A-204ENST00000371750 EHD4Q9H223 541 aa15.54■□□□□ 0.08
TTC39A-204ENST00000371750 PI4KBQ9UBF8 816 aa15.54■□□□□ 0.08
TTC39A-204ENST00000371750 SERPINB13Q9UIV8 391 aa15.54■□□□□ 0.08
TTC39A-204ENST00000371750 GABPAQ06546 454 aa15.53■□□□□ 0.08
TTC39A-204ENST00000371750 RNF20Q5VTR2 975 aa15.53■□□□□ 0.08
TTC39A-204ENST00000371750 CDC37L1Q7L3B6 337 aa15.53■□□□□ 0.08
TTC39A-204ENST00000371750 CRACR2BQ8N4Y2 399 aaPredicted RBP15.53■□□□□ 0.08
TTC39A-204ENST00000371750 C22orf23Q9BZE7 217 aa15.53■□□□□ 0.08
TTC39A-204ENST00000371750 INCENPQ9NQS7 918 aa15.53■□□□□ 0.08
TTC39A-204ENST00000371750 SNX14Q9Y5W7 946 aa15.53■□□□□ 0.08
TTC39A-204ENST00000371750 OTOFQ9HC10 1997 aa15.53■□□□□ 0.08
TTC39A-204ENST00000371750 TRAF5O00463 557 aa15.53■□□□□ 0.08
TTC39A-204ENST00000371750 CHADLQ6NUI6 762 aa15.53■□□□□ 0.08
TTC39A-204ENST00000371750 C16orf86Q6ZW13 317 aa15.53■□□□□ 0.08
TTC39A-204ENST00000371750 STAG1Q8WVM7 1258 aa15.53■□□□□ 0.08
TTC39A-204ENST00000371750 KCNB2Q92953 911 aa15.53■□□□□ 0.08
TTC39A-204ENST00000371750 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.53■□□□□ 0.08
TTC39A-204ENST00000371750 PRDM1O75626 825 aa15.52■□□□□ 0.08
TTC39A-204ENST00000371750 FMR1Q06787 632 aaKnown RBP eCLIP15.52■□□□□ 0.08
TTC39A-204ENST00000371750 AKNAD1Q5T1N1 836 aa15.52■□□□□ 0.08
TTC39A-204ENST00000371750 MIGA2Q7L4E1 593 aa15.52■□□□□ 0.08
TTC39A-204ENST00000371750 ATAD5Q96QE3 1844 aa15.51■□□□□ 0.07
TTC39A-204ENST00000371750 E7EWF7 191 aa15.51■□□□□ 0.07
TTC39A-204ENST00000371750 NKX2-3Q8TAU0 364 aa15.51■□□□□ 0.07
TTC39A-204ENST00000371750 TBC1D32Q96NH3 1257 aa15.51■□□□□ 0.07
TTC39A-204ENST00000371750 TRIM34Q9BYJ4 488 aa15.51■□□□□ 0.07
TTC39A-204ENST00000371750 FZD1Q9UP38 647 aa15.51■□□□□ 0.07
TTC39A-204ENST00000371750 SLC3A2P08195 630 aaKnown RBP15.51■□□□□ 0.07
TTC39A-204ENST00000371750 ZKSCAN1P17029 563 aaPredicted RBP15.51■□□□□ 0.07
TTC39A-204ENST00000371750 SHMT1P34896 483 aa15.51■□□□□ 0.07
TTC39A-204ENST00000371750 CDK8P49336 464 aa15.51■□□□□ 0.07
TTC39A-204ENST00000371750 COL9A3Q14050 684 aaPredicted RBP15.51■□□□□ 0.07
TTC39A-204ENST00000371750 ADCK5Q3MIX3 580 aa15.51■□□□□ 0.07
TTC39A-204ENST00000371750 METTL16Q86W50 562 aaKnown RBP15.51■□□□□ 0.07
TTC39A-204ENST00000371750 HERC5Q9UII4 1024 aaKnown RBP15.51■□□□□ 0.07
TTC39A-204ENST00000371750 RBM25P49756 843 aaKnown RBP15.5■□□□□ 0.07
TTC39A-204ENST00000371750 MFSD6Q6ZSS7 791 aa15.5■□□□□ 0.07
TTC39A-204ENST00000371750 RNF41Q9H4P4 317 aaPredicted RBP15.5■□□□□ 0.07
TTC39A-204ENST00000371750 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.5■□□□□ 0.07
TTC39A-204ENST00000371750 TOMM22Q9NS69 142 aa15.5■□□□□ 0.07
TTC39A-204ENST00000371750 SWAP70Q9UH65 585 aa15.5■□□□□ 0.07
TTC39A-204ENST00000371750 GREB1LQ9C091 1923 aaPredicted RBP15.5■□□□□ 0.07
TTC39A-204ENST00000371750 DOCK1Q14185 1865 aa15.5■□□□□ 0.07
TTC39A-204ENST00000371750 PDE4BQ07343 736 aa15.5■□□□□ 0.07
TTC39A-204ENST00000371750 RRP12Q5JTH9 1297 aaKnown RBP15.5■□□□□ 0.07
TTC39A-204ENST00000371750 FOXP4Q8IVH2 680 aaPredicted RBP15.5■□□□□ 0.07
TTC39A-204ENST00000371750 TRPM7Q96QT4 1865 aa15.49■□□□□ 0.07
TTC39A-204ENST00000371750 TBC1D12O60347 775 aa15.49■□□□□ 0.07
TTC39A-204ENST00000371750 FGRP09769 529 aa15.49■□□□□ 0.07
TTC39A-204ENST00000371750 RASA1P20936 1047 aa15.49■□□□□ 0.07
TTC39A-204ENST00000371750 PRKG1Q13976 671 aa15.49■□□□□ 0.07
TTC39A-204ENST00000371750 TSGA10IPQ3SY00 556 aa15.49■□□□□ 0.07
TTC39A-204ENST00000371750 SUPT20HL1Q3ZLR7 823 aa15.49■□□□□ 0.07
TTC39A-204ENST00000371750 JAKMIP1Q96N16 626 aaKnown RBP15.49■□□□□ 0.07
TTC39A-204ENST00000371750 ZNF408Q9H9D4 720 aa15.49■□□□□ 0.07
TTC39A-204ENST00000371750 B4E1Z4 1266 aa15.48■□□□□ 0.07
TTC39A-204ENST00000371750 ORC4O43929 436 aa15.48■□□□□ 0.07
TTC39A-204ENST00000371750 ANAPC15P60006 121 aa15.48■□□□□ 0.07
TTC39A-204ENST00000371750 MAP3K10Q02779 954 aa15.48■□□□□ 0.07
TTC39A-204ENST00000371750 RRP1BQ14684 758 aaKnown RBP15.48■□□□□ 0.07
TTC39A-204ENST00000371750 SHROOM1Q2M3G4 852 aaPredicted RBP15.48■□□□□ 0.07
TTC39A-204ENST00000371750 DCAF15Q66K64 600 aa15.48■□□□□ 0.07
TTC39A-204ENST00000371750 HOOK2Q96ED9 719 aa15.48■□□□□ 0.07
TTC39A-204ENST00000371750 MKNK2Q9HBH9 465 aa15.48■□□□□ 0.07
TTC39A-204ENST00000371750 GDF11O95390 407 aa15.48■□□□□ 0.07
TTC39A-204ENST00000371750 ITGBL1O95965 494 aaPredicted RBP15.48■□□□□ 0.07
TTC39A-204ENST00000371750 PCP11498 1178 aaKnown RBP15.48■□□□□ 0.07
TTC39A-204ENST00000371750 KRT32Q14532 448 aa15.48■□□□□ 0.07
TTC39A-204ENST00000371750 TATDN1Q6P1N9 297 aa15.48■□□□□ 0.07
TTC39A-204ENST00000371750 RALYLQ86SE5 291 aaKnown RBP15.48■□□□□ 0.07
TTC39A-204ENST00000371750 KIF2CQ99661 725 aa15.48■□□□□ 0.07
TTC39A-204ENST00000371750 ZNF341Q9BYN7 854 aa15.48■□□□□ 0.07
TTC39A-204ENST00000371750 KDM4AO75164 1064 aa15.47■□□□□ 0.07
TTC39A-204ENST00000371750 CPA1P15085 419 aa15.47■□□□□ 0.07
TTC39A-204ENST00000371750 AKR1B1P15121 316 aa15.47■□□□□ 0.07
TTC39A-204ENST00000371750 NF2P35240 595 aa15.47■□□□□ 0.07
TTC39A-204ENST00000371750 FAM47AQ5JRC9 791 aa15.47■□□□□ 0.07
TTC39A-204ENST00000371750 MB21D2Q8IYB1 491 aaPredicted RBP15.47■□□□□ 0.07
TTC39A-204ENST00000371750 SMC1BQ8NDV3 1235 aa15.47■□□□□ 0.07
TTC39A-204ENST00000371750 NCOA7Q8NI08 942 aa15.47■□□□□ 0.07
TTC39A-204ENST00000371750 IL17RAQ96F46 866 aa15.47■□□□□ 0.07
TTC39A-204ENST00000371750 CNNM2Q9H8M5 875 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms