RNA–Protein interactions for RNA: ENST00000361371.9

LTN1-201, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LTN1, Length 7,685 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-201ENST00000361371 SALL1Q9NSC2 1324 aa3.37□□□□□ -1.87
LTN1-201ENST00000361371 KAT6BQ8WYB5 2073 aa3.37□□□□□ -1.87
LTN1-201ENST00000361371 ZSCAN22P10073 491 aaPredicted RBP3.37□□□□□ -1.87
LTN1-201ENST00000361371 MIGA2Q7L4E1 593 aa3.37□□□□□ -1.87
LTN1-201ENST00000361371 ZSCAN31Q96LW9 406 aaPredicted RBP3.37□□□□□ -1.87
LTN1-201ENST00000361371 TMEM63CQ9P1W3 806 aa3.37□□□□□ -1.87
LTN1-201ENST00000361371 PIM2Q9P1W9 311 aa3.37□□□□□ -1.87
LTN1-201ENST00000361371 ANGEL1Q9UNK9 670 aaKnown RBP3.37□□□□□ -1.87
LTN1-201ENST00000361371 DUOX1Q9NRD9 1551 aa3.36□□□□□ -1.87
LTN1-201ENST00000361371 A0A1W2PRG0 241 aa3.36□□□□□ -1.87
LTN1-201ENST00000361371 GOLGA8AA7E2F4 631 aa3.36□□□□□ -1.87
LTN1-201ENST00000361371 FUT2Q10981 343 aa3.36□□□□□ -1.87
LTN1-201ENST00000361371 CCDC93Q567U6 631 aa3.36□□□□□ -1.87
LTN1-201ENST00000361371 NFXL1Q6ZNB6 911 aa3.36□□□□□ -1.87
LTN1-201ENST00000361371 USP48Q86UV5 1035 aa3.36□□□□□ -1.87
LTN1-201ENST00000361371 STAG1Q8WVM7 1258 aa3.36□□□□□ -1.87
LTN1-201ENST00000361371 FAM163AQ96GL9 167 aaPredicted RBP3.36□□□□□ -1.87
LTN1-201ENST00000361371 USP28Q96RU2 1077 aa3.36□□□□□ -1.87
LTN1-201ENST00000361371 NACAP1Q9BZK3 213 aa3.36□□□□□ -1.87
LTN1-201ENST00000361371 ZBTB4Q9P1Z0 1013 aaPredicted RBP3.36□□□□□ -1.87
LTN1-201ENST00000361371 V9GY48 417 aaPredicted RBP3.36□□□□□ -1.87
LTN1-201ENST00000361371 NHSQ6T4R5 1651 aa3.36□□□□□ -1.87
LTN1-201ENST00000361371 NUP188Q5SRE5 1749 aa3.36□□□□□ -1.87
LTN1-201ENST00000361371 NR5A1Q13285 461 aa3.36□□□□□ -1.87
LTN1-201ENST00000361371 ZNF654Q8IZM8 581 aa3.36□□□□□ -1.87
LTN1-201ENST00000361371 CRNKL1Q9BZJ0 848 aaKnown RBP3.36□□□□□ -1.87
LTN1-201ENST00000361371 ITGB4P16144 1822 aa3.36□□□□□ -1.87
LTN1-201ENST00000361371 BTAF1O14981 1849 aa3.36□□□□□ -1.87
LTN1-201ENST00000361371 BTBD18B2RXH4 712 aa3.36□□□□□ -1.87
LTN1-201ENST00000361371 CYTH3O43739 400 aa3.36□□□□□ -1.87
LTN1-201ENST00000361371 SHMT1P34896 483 aa3.36□□□□□ -1.87
LTN1-201ENST00000361371 CDK8P49336 464 aa3.36□□□□□ -1.87
LTN1-201ENST00000361371 SNAP25P60880 206 aa3.36□□□□□ -1.87
LTN1-201ENST00000361371 TRDNQ13061 729 aa3.36□□□□□ -1.87
LTN1-201ENST00000361371 CFAP100Q494V2 611 aa3.36□□□□□ -1.87
LTN1-201ENST00000361371 TTBK2Q6IQ55 1244 aa3.36□□□□□ -1.87
LTN1-201ENST00000361371 SRBD1Q8N5C6 995 aaKnown RBP3.36□□□□□ -1.87
LTN1-201ENST00000361371 FANCBQ8NB91 859 aa3.36□□□□□ -1.87
LTN1-201ENST00000361371 ATP8A2Q9NTI2 1148 aa3.36□□□□□ -1.87
LTN1-201ENST00000361371 CIZ1Q9ULV3 898 aaPredicted RBP3.36□□□□□ -1.87
LTN1-201ENST00000361371 STX8Q9UNK0 236 aa3.36□□□□□ -1.87
LTN1-201ENST00000361371 TSPY2A6NKD2 308 aa3.36□□□□□ -1.87
LTN1-201ENST00000361371 RESTQ13127 1097 aa3.36□□□□□ -1.87
LTN1-201ENST00000361371 NPY5RQ15761 445 aa3.36□□□□□ -1.87
LTN1-201ENST00000361371 TBC1D10BQ4KMP7 808 aaPredicted RBP3.36□□□□□ -1.87
LTN1-201ENST00000361371 KRT40Q6A162 431 aa3.36□□□□□ -1.87
LTN1-201ENST00000361371 TMEM47Q9BQJ4 181 aa3.36□□□□□ -1.87
LTN1-201ENST00000361371 SYT17Q9BSW7 474 aa3.36□□□□□ -1.87
LTN1-201ENST00000361371 SLC26A6Q9BXS9 759 aa3.36□□□□□ -1.87
LTN1-201ENST00000361371 PANK2Q9BZ23 570 aa3.36□□□□□ -1.87
LTN1-201ENST00000361371 ALDH8A1Q9H2A2 487 aaPredicted RBP3.36□□□□□ -1.87
LTN1-201ENST00000361371 ZNF541Q9H0D2 1346 aa3.36□□□□□ -1.87
LTN1-201ENST00000361371 C10orf71Q711Q0 1435 aa3.36□□□□□ -1.87
LTN1-201ENST00000361371 PEX10O60683 326 aa3.36□□□□□ -1.87
LTN1-201ENST00000361371 SLC16A2P36021 539 aa3.36□□□□□ -1.87
LTN1-201ENST00000361371 EPS15P42566 896 aa3.36□□□□□ -1.87
LTN1-201ENST00000361371 MCM2P49736 904 aa3.36□□□□□ -1.87
LTN1-201ENST00000361371 GRIN1Q05586 938 aa3.36□□□□□ -1.87
LTN1-201ENST00000361371 GABPAQ06546 454 aa3.36□□□□□ -1.87
LTN1-201ENST00000361371 PKN1Q16512 942 aa3.36□□□□□ -1.87
LTN1-201ENST00000361371 USP17L2Q6R6M4 530 aa3.36□□□□□ -1.87
LTN1-201ENST00000361371 LRRC47Q8N1G4 583 aaKnown RBP3.36□□□□□ -1.87
LTN1-201ENST00000361371 RASGRP4Q8TDF6 673 aa3.36□□□□□ -1.87
LTN1-201ENST00000361371 PGBD1Q96JS3 809 aa3.36□□□□□ -1.87
LTN1-201ENST00000361371 UIMC1Q96RL1 719 aa3.36□□□□□ -1.87
LTN1-201ENST00000361371 NUP88Q99567 741 aaPredicted RBP3.36□□□□□ -1.87
LTN1-201ENST00000361371 TMEM39BQ9GZU3 492 aa3.36□□□□□ -1.87
LTN1-201ENST00000361371 GJA3Q9Y6H8 435 aa3.36□□□□□ -1.87
LTN1-201ENST00000361371 ZBTB43O43298 467 aa3.36□□□□□ -1.87
LTN1-201ENST00000361371 DDNO94850 711 aaPredicted RBP3.36□□□□□ -1.87
LTN1-201ENST00000361371 FGRP09769 529 aa3.36□□□□□ -1.87
LTN1-201ENST00000361371 PRKG1Q13976 671 aa3.36□□□□□ -1.87
LTN1-201ENST00000361371 WTAPQ15007 396 aa3.36□□□□□ -1.87
LTN1-201ENST00000361371 SGMS1Q86VZ5 419 aa3.36□□□□□ -1.87
LTN1-201ENST00000361371 ZNF274Q96GC6 653 aaPredicted RBP3.36□□□□□ -1.87
LTN1-201ENST00000361371 VAT1LQ9HCJ6 419 aa3.36□□□□□ -1.87
LTN1-201ENST00000361371 SH2B1Q9NRF2 756 aaPredicted RBP3.36□□□□□ -1.87
LTN1-201ENST00000361371 ANAPC4Q9UJX5 808 aa3.36□□□□□ -1.87
LTN1-201ENST00000361371 DDX49Q9Y6V7 483 aaKnown RBP3.36□□□□□ -1.87
LTN1-201ENST00000361371 YBX3P16989 372 aaKnown RBP eCLIP3.35□□□□□ -1.876e-7■■■□□ 17
LTN1-201ENST00000361371 LIG1P18858 919 aa3.35□□□□□ -1.87
LTN1-201ENST00000361371 METAP2P50579 478 aaKnown RBP eCLIP3.35□□□□□ -1.87
LTN1-201ENST00000361371 SEPT2Q15019 361 aa3.35□□□□□ -1.87
LTN1-201ENST00000361371 SLC30A10Q6XR72 485 aa3.35□□□□□ -1.87
LTN1-201ENST00000361371 ZSCAN29Q8IWY8 852 aaPredicted RBP3.35□□□□□ -1.87
LTN1-201ENST00000361371 ACER1Q8TDN7 264 aa3.35□□□□□ -1.87
LTN1-201ENST00000361371 GPKOWQ92917 476 aaPredicted RBP eCLIP3.35□□□□□ -1.873e-6■■■■■ 32.9
LTN1-201ENST00000361371 ZSCAN10Q96SZ4 725 aaPredicted RBP3.35□□□□□ -1.87
LTN1-201ENST00000361371 EYA3Q99504 573 aa3.35□□□□□ -1.87
LTN1-201ENST00000361371 OSBPL5Q9H0X9 879 aaPredicted RBP3.35□□□□□ -1.87
LTN1-201ENST00000361371 PDS5AQ29RF7 1337 aaKnown RBP3.35□□□□□ -1.87
LTN1-201ENST00000361371 LDHCP07864 332 aa3.35□□□□□ -1.87
LTN1-201ENST00000361371 POLD1P28340 1107 aa3.35□□□□□ -1.87
LTN1-201ENST00000361371 DEKP35659 375 aaKnown RBP3.35□□□□□ -1.87
LTN1-201ENST00000361371 ECE1P42892 770 aa3.35□□□□□ -1.87
LTN1-201ENST00000361371 HIRAP54198 1017 aaPredicted RBP3.35□□□□□ -1.87
LTN1-201ENST00000361371 SBK1Q52WX2 424 aa3.35□□□□□ -1.87
LTN1-201ENST00000361371 STRIP1Q5VSL9 837 aa3.35□□□□□ -1.87
LTN1-201ENST00000361371 CAVIN1Q6NZI2 390 aaKnown RBP3.35□□□□□ -1.87
LTN1-201ENST00000361371 USP49Q70CQ1 688 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms