RNA–Protein interactions for RNA: ENST00000361293.9

CHD1L-201, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2 BASIC

Gene CHD1L, Length 2,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-201ENST00000361293 AATFQ9NY61 560 aaKnown RBP eCLIP23.25■■□□□ 1.31
CHD1L-201ENST00000361293 SEMA3EO15041 775 aa23.24■■□□□ 1.31
CHD1L-201ENST00000361293 PFKFB1P16118 471 aa23.24■■□□□ 1.31
CHD1L-201ENST00000361293 CTR9Q6PD62 1173 aa23.24■■□□□ 1.31
CHD1L-201ENST00000361293 PLA2G4DQ86XP0 818 aa23.24■■□□□ 1.31
CHD1L-201ENST00000361293 FANCBQ8NB91 859 aa23.24■■□□□ 1.31
CHD1L-201ENST00000361293 ANKRD2Q9GZV1 360 aa23.24■■□□□ 1.31
CHD1L-201ENST00000361293 NPHP1O15259 732 aa23.24■■□□□ 1.31
CHD1L-201ENST00000361293 RFC4P35249 363 aa23.24■■□□□ 1.31
CHD1L-201ENST00000361293 ZNF75DP51815 510 aa23.24■■□□□ 1.31
CHD1L-201ENST00000361293 ENAHQ8N8S7 591 aaPredicted RBP23.24■■□□□ 1.31
CHD1L-201ENST00000361293 PIBF1Q8WXW3 757 aa23.24■■□□□ 1.31
CHD1L-201ENST00000361293 MTA3Q9BTC8 594 aa23.24■■□□□ 1.31
CHD1L-201ENST00000361293 R3HCC1Q9Y3T6 440 aaKnown RBP23.24■■□□□ 1.31
CHD1L-201ENST00000361293 SPATA31A6Q5VVP1 1343 aa23.23■■□□□ 1.31
CHD1L-201ENST00000361293 IRS2Q9Y4H2 1338 aa23.23■■□□□ 1.31
CHD1L-201ENST00000361293 BTBD18B2RXH4 712 aa23.23■■□□□ 1.31
CHD1L-201ENST00000361293 ZNF202O95125 648 aa23.23■■□□□ 1.31
CHD1L-201ENST00000361293 CAVIN2O95810 425 aa23.23■■□□□ 1.31
CHD1L-201ENST00000361293 FAM196AQ6ZSG2 479 aa23.23■■□□□ 1.31
CHD1L-201ENST00000361293 CRACR2BQ8N4Y2 399 aaPredicted RBP23.23■■□□□ 1.31
CHD1L-201ENST00000361293 GJD4Q96KN9 370 aaPredicted RBP23.23■■□□□ 1.31
CHD1L-201ENST00000361293 LRRC4BQ9NT99 713 aa23.23■■□□□ 1.31
CHD1L-201ENST00000361293 USP17L12C9JPN9 530 aa23.23■■□□□ 1.31
CHD1L-201ENST00000361293 USP17L21D6R901 530 aa23.23■■□□□ 1.31
CHD1L-201ENST00000361293 NFIXQ14938 502 aa23.23■■□□□ 1.31
CHD1L-201ENST00000361293 CMA1P23946 247 aa23.22■■□□□ 1.31
CHD1L-201ENST00000361293 DHX40Q8IX18 779 aaKnown RBP23.22■■□□□ 1.31
CHD1L-201ENST00000361293 TMTC2Q8N394 836 aa23.22■■□□□ 1.31
CHD1L-201ENST00000361293 MMP1P03956 469 aa23.22■■□□□ 1.31
CHD1L-201ENST00000361293 PTGS1P23219 599 aa23.22■■□□□ 1.31
CHD1L-201ENST00000361293 TRIM22Q8IYM9 498 aa23.22■■□□□ 1.31
CHD1L-201ENST00000361293 CLIC6Q96NY7 704 aa23.22■■□□□ 1.31
CHD1L-201ENST00000361293 NRBP1Q9UHY1 535 aa23.22■■□□□ 1.31
CHD1L-201ENST00000361293 TRAPPC3LQ5T215 181 aa23.21■■□□□ 1.31
CHD1L-201ENST00000361293 SHC4Q6S5L8 630 aa23.21■■□□□ 1.31
CHD1L-201ENST00000361293 ZSCAN10Q96SZ4 725 aaPredicted RBP23.21■■□□□ 1.31
CHD1L-201ENST00000361293 ANO10Q9NW15 660 aa23.21■■□□□ 1.31
CHD1L-201ENST00000361293 PYCARDQ9ULZ3 195 aa23.21■■□□□ 1.31
CHD1L-201ENST00000361293 PDS5AQ29RF7 1337 aaKnown RBP23.21■■□□□ 1.31
CHD1L-201ENST00000361293 NOSTRINQ8IVI9 506 aa23.21■■□□□ 1.31
CHD1L-201ENST00000361293 DIS3L2Q8IYB7 885 aaKnown RBP23.21■■□□□ 1.31
CHD1L-201ENST00000361293 KIAA1468Q9P260 1216 aa23.21■■□□□ 1.31
CHD1L-201ENST00000361293 SHISA4Q96DD7 197 aa23.2■■□□□ 1.3
CHD1L-201ENST00000361293 DCP1AQ9NPI6 582 aaPredicted RBP23.2■■□□□ 1.3
CHD1L-201ENST00000361293 GOLGA6L19H0YKK7 550 aa23.2■■□□□ 1.3
CHD1L-201ENST00000361293 PPP6R2O75170 966 aa23.2■■□□□ 1.3
CHD1L-201ENST00000361293 TOB1P50616 345 aaPredicted RBP23.2■■□□□ 1.3
CHD1L-201ENST00000361293 DPCR1Q3MIW9 517 aa23.2■■□□□ 1.3
CHD1L-201ENST00000361293 WASF1Q92558 559 aa23.2■■□□□ 1.3
CHD1L-201ENST00000361293 DEXIO95424 95 aa23.19■■□□□ 1.3
CHD1L-201ENST00000361293 FGRP09769 529 aa23.19■■□□□ 1.3
CHD1L-201ENST00000361293 RCAN1P53805 252 aa23.19■■□□□ 1.3
CHD1L-201ENST00000361293 NR5A1Q13285 461 aa23.19■■□□□ 1.3
CHD1L-201ENST00000361293 NOLC1Q14978 699 aaKnown RBP eCLIP23.19■■□□□ 1.34e-7■■■■□ 25.6
CHD1L-201ENST00000361293 MYH6P13533 1939 aa23.19■■□□□ 1.3
CHD1L-201ENST00000361293 CCDC196A0A1B0GTZ2 297 aa23.19■■□□□ 1.3
CHD1L-201ENST00000361293 CYP2D6P10635 497 aa23.19■■□□□ 1.3
CHD1L-201ENST00000361293 CCDC186Q7Z3E2 898 aa23.19■■□□□ 1.3
CHD1L-201ENST00000361293 GOLGA6L6A8MZA4 724 aa23.18■■□□□ 1.3
CHD1L-201ENST00000361293 BIN1O00499 593 aa23.18■■□□□ 1.3
CHD1L-201ENST00000361293 AOPEPQ8N6M6 819 aa23.18■■□□□ 1.3
CHD1L-201ENST00000361293 OXER1Q8TDS5 423 aa23.18■■□□□ 1.3
CHD1L-201ENST00000361293 GPR101Q96P66 508 aaPredicted RBP23.18■■□□□ 1.3
CHD1L-201ENST00000361293 HPSEQ9Y251 543 aa23.18■■□□□ 1.3
CHD1L-201ENST00000361293 hCG_1642624A0A1W2PR95 340 aa23.18■■□□□ 1.3
CHD1L-201ENST00000361293 NMT2O60551 498 aa23.18■■□□□ 1.3
CHD1L-201ENST00000361293 SLC4A8Q2Y0W8 1093 aa23.18■■□□□ 1.3
CHD1L-201ENST00000361293 MEX3CQ5U5Q3 659 aaKnown RBP23.18■■□□□ 1.3
CHD1L-201ENST00000361293 DRC7Q8IY82 874 aa23.18■■□□□ 1.3
CHD1L-201ENST00000361293 CEP57L1Q8IYX8 460 aa23.18■■□□□ 1.3
CHD1L-201ENST00000361293 ANKIB1Q9P2G1 1089 aa23.18■■□□□ 1.3
CHD1L-201ENST00000361293 CCDC88AQ3V6T2 1871 aa23.17■■□□□ 1.3
CHD1L-201ENST00000361293 MAST2Q6P0Q8 1798 aa23.17■■□□□ 1.3
CHD1L-201ENST00000361293 BECN2A8MW95 431 aa23.17■■□□□ 1.3
CHD1L-201ENST00000361293 SLC3A2P08195 630 aaKnown RBP23.17■■□□□ 1.3
CHD1L-201ENST00000361293 IFIT1BQ5T764 474 aaKnown RBP23.17■■□□□ 1.3
CHD1L-201ENST00000361293 CNBD1Q8NA66 436 aa23.17■■□□□ 1.3
CHD1L-201ENST00000361293 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.17■■□□□ 1.3
CHD1L-201ENST00000361293 AFF2P51816 1311 aa23.17■■□□□ 1.3
CHD1L-201ENST00000361293 PLEKHA8P1O95397 391 aa23.17■■□□□ 1.3
CHD1L-201ENST00000361293 KIAA1524Q8TCG1 905 aa23.17■■□□□ 1.3
CHD1L-201ENST00000361293 CRNKL1Q9BZJ0 848 aaKnown RBP23.17■■□□□ 1.3
CHD1L-201ENST00000361293 SYKP43405 635 aa23.16■■□□□ 1.3
CHD1L-201ENST00000361293 FUT2Q10981 343 aa23.16■■□□□ 1.3
CHD1L-201ENST00000361293 LRMPQ12912 555 aa23.16■■□□□ 1.3
CHD1L-201ENST00000361293 GRAPQ13588 217 aa23.16■■□□□ 1.3
CHD1L-201ENST00000361293 SARM1Q6SZW1 724 aa23.16■■□□□ 1.3
CHD1L-201ENST00000361293 GRAPLQ8TC17 118 aaPredicted RBP23.16■■□□□ 1.3
CHD1L-201ENST00000361293 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.16■■□□□ 1.3
CHD1L-201ENST00000361293 LAMB1P07942 1786 aa23.16■■□□□ 1.3
CHD1L-201ENST00000361293 KIAA1551Q9HCM1 1747 aa23.16■■□□□ 1.3
CHD1L-201ENST00000361293 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.16■■□□□ 1.3
CHD1L-201ENST00000361293 SAFBQ15424 915 aaKnown RBP eCLIP23.16■■□□□ 1.3
CHD1L-201ENST00000361293 FAM47AQ5JRC9 791 aa23.16■■□□□ 1.3
CHD1L-201ENST00000361293 SEPT12Q8IYM1 358 aa23.16■■□□□ 1.3
CHD1L-201ENST00000361293 JMYQ8N9B5 988 aa23.16■■□□□ 1.3
CHD1L-201ENST00000361293 DLEC1Q9Y238 1755 aa23.15■■□□□ 1.3
CHD1L-201ENST00000361293 TROAPQ12815 778 aa23.15■■□□□ 1.3
CHD1L-201ENST00000361293 GRIK5Q16478 980 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms