RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 BTBD18B2RXH4 712 aa9.39□□□□□ -0.91
CDC42SE1-201ENST00000357235 H7C1W4 665 aa9.39□□□□□ -0.91
CDC42SE1-201ENST00000357235 ZBTB43O43298 467 aa9.39□□□□□ -0.91
CDC42SE1-201ENST00000357235 COBLO75128 1261 aa9.39□□□□□ -0.91
CDC42SE1-201ENST00000357235 SASH3O75995 380 aa9.39□□□□□ -0.91
CDC42SE1-201ENST00000357235 GRIN1Q05586 938 aa9.39□□□□□ -0.91
CDC42SE1-201ENST00000357235 CYB5R4Q7L1T6 521 aa9.39□□□□□ -0.91
CDC42SE1-201ENST00000357235 DHX58Q96C10 678 aa9.39□□□□□ -0.91
CDC42SE1-201ENST00000357235 RAI14Q9P0K7 980 aa9.39□□□□□ -0.91
CDC42SE1-201ENST00000357235 KDM6AO15550 1401 aaPredicted RBP9.38□□□□□ -0.91
CDC42SE1-201ENST00000357235 CCDC189A1A4V9 331 aa9.38□□□□□ -0.91
CDC42SE1-201ENST00000357235 CDKL5O76039 1030 aa9.38□□□□□ -0.91
CDC42SE1-201ENST00000357235 TMEM67Q5HYA8 995 aa9.38□□□□□ -0.91
CDC42SE1-201ENST00000357235 TBC1D10CQ8IV04 446 aa9.38□□□□□ -0.91
CDC42SE1-201ENST00000357235 SYNE4Q8N205 404 aa9.38□□□□□ -0.91
CDC42SE1-201ENST00000357235 NUP133Q8WUM0 1156 aa9.38□□□□□ -0.91
CDC42SE1-201ENST00000357235 PARD6BQ9BYG5 372 aa9.38□□□□□ -0.91
CDC42SE1-201ENST00000357235 KCND1Q9NSA2 647 aa9.38□□□□□ -0.91
CDC42SE1-201ENST00000357235 SAMSN1Q9NSI8 373 aaKnown RBP9.38□□□□□ -0.91
CDC42SE1-201ENST00000357235 BMP6P22004 513 aa9.38□□□□□ -0.91
CDC42SE1-201ENST00000357235 GPTP24298 496 aa9.38□□□□□ -0.91
CDC42SE1-201ENST00000357235 CALRP27797 417 aaKnown RBP9.38□□□□□ -0.91
CDC42SE1-201ENST00000357235 AFMP43652 599 aa9.38□□□□□ -0.91
CDC42SE1-201ENST00000357235 CORO7P57737 925 aa9.38□□□□□ -0.91
CDC42SE1-201ENST00000357235 FMR1Q06787 632 aaKnown RBP eCLIP9.38□□□□□ -0.91
CDC42SE1-201ENST00000357235 SKIDA1Q1XH10 827 aa9.38□□□□□ -0.91
CDC42SE1-201ENST00000357235 APOA5Q6Q788 366 aa9.38□□□□□ -0.91
CDC42SE1-201ENST00000357235 SRRTQ9BXP5 876 aaKnown RBP9.38□□□□□ -0.91
CDC42SE1-201ENST00000357235 INTS13Q9NVM9 706 aa9.38□□□□□ -0.91
CDC42SE1-201ENST00000357235 NFAT5O94916 1531 aa9.38□□□□□ -0.91
CDC42SE1-201ENST00000357235 SOWAHDA6NJG2 315 aa9.37□□□□□ -0.91
CDC42SE1-201ENST00000357235 IFIT3O14879 490 aaKnown RBP9.37□□□□□ -0.91
CDC42SE1-201ENST00000357235 TPM1P09493 284 aa9.37□□□□□ -0.91
CDC42SE1-201ENST00000357235 IFIT5Q13325 482 aaKnown RBP9.37□□□□□ -0.91
CDC42SE1-201ENST00000357235 DHX8Q14562 1220 aaKnown RBP9.37□□□□□ -0.91
CDC42SE1-201ENST00000357235 SAFBQ15424 915 aaKnown RBP eCLIP9.37□□□□□ -0.91
CDC42SE1-201ENST00000357235 SPECC1LQ69YQ0 1117 aa9.37□□□□□ -0.91
CDC42SE1-201ENST00000357235 LDHAL6AQ6ZMR3 332 aa9.37□□□□□ -0.91
CDC42SE1-201ENST00000357235 RPAINQ86UA6 219 aa9.37□□□□□ -0.91
CDC42SE1-201ENST00000357235 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.37□□□□□ -0.91
CDC42SE1-201ENST00000357235 CNNM1Q9NRU3 951 aa9.37□□□□□ -0.91
CDC42SE1-201ENST00000357235 SERTAD1Q9UHV2 236 aa9.37□□□□□ -0.91
CDC42SE1-201ENST00000357235 HOOK1Q9UJC3 728 aaKnown RBP9.37□□□□□ -0.91
CDC42SE1-201ENST00000357235 TUBE1Q9UJT0 475 aa9.37□□□□□ -0.91
CDC42SE1-201ENST00000357235 SLC12A7Q9Y666 1083 aa9.37□□□□□ -0.91
CDC42SE1-201ENST00000357235 PPP1R12AO14974 1030 aaPredicted RBP9.37□□□□□ -0.91
CDC42SE1-201ENST00000357235 TBC1D8O95759 1140 aa9.37□□□□□ -0.91
CDC42SE1-201ENST00000357235 ZFYP08048 801 aaPredicted RBP9.37□□□□□ -0.91
CDC42SE1-201ENST00000357235 CASP1P29466 404 aa9.37□□□□□ -0.91
CDC42SE1-201ENST00000357235 MNAT1P51948 309 aa9.37□□□□□ -0.91
CDC42SE1-201ENST00000357235 PPP2R5AQ15172 486 aa9.37□□□□□ -0.91
CDC42SE1-201ENST00000357235 CC2D1AQ6P1N0 951 aaPredicted RBP9.37□□□□□ -0.91
CDC42SE1-201ENST00000357235 KRI1Q8N9T8 703 aaKnown RBP9.37□□□□□ -0.91
CDC42SE1-201ENST00000357235 SGSM3Q96HU1 749 aa9.37□□□□□ -0.91
CDC42SE1-201ENST00000357235 AKAP2Q9Y2D5 859 aa9.37□□□□□ -0.91
CDC42SE1-201ENST00000357235 A0A0U1RQJ8 604 aa9.37□□□□□ -0.91
CDC42SE1-201ENST00000357235 PHACTR2O75167 634 aa9.37□□□□□ -0.91
CDC42SE1-201ENST00000357235 TFRCP02786 760 aaKnown RBP9.37□□□□□ -0.91
CDC42SE1-201ENST00000357235 TUBB4AP04350 444 aa9.37□□□□□ -0.91
CDC42SE1-201ENST00000357235 CTDSPL2Q05D32 466 aa9.37□□□□□ -0.91
CDC42SE1-201ENST00000357235 POSTNQ15063 836 aa9.37□□□□□ -0.91
CDC42SE1-201ENST00000357235 WWC2Q6AWC2 1192 aa9.37□□□□□ -0.91
CDC42SE1-201ENST00000357235 HELBQ8NG08 1087 aaPredicted RBP9.37□□□□□ -0.91
CDC42SE1-201ENST00000357235 ATRIPQ8WXE1 791 aa9.37□□□□□ -0.91
CDC42SE1-201ENST00000357235 STAMQ92783 540 aa9.37□□□□□ -0.91
CDC42SE1-201ENST00000357235 AIDAQ96BJ3 306 aa9.37□□□□□ -0.91
CDC42SE1-201ENST00000357235 MPHOSPH8Q99549 860 aa9.37□□□□□ -0.91
CDC42SE1-201ENST00000357235 C19orf44Q9H6X5 657 aa9.37□□□□□ -0.91
CDC42SE1-201ENST00000357235 RBM28Q9NW13 759 aaKnown RBP9.37□□□□□ -0.91
CDC42SE1-201ENST00000357235 ZMYM6O95789 1325 aa9.36□□□□□ -0.91
CDC42SE1-201ENST00000357235 RHOXF2BP0C7M4 288 aa9.36□□□□□ -0.91
CDC42SE1-201ENST00000357235 GUCY1A2P33402 732 aa9.36□□□□□ -0.91
CDC42SE1-201ENST00000357235 KCNJ6P48051 423 aa9.36□□□□□ -0.91
CDC42SE1-201ENST00000357235 SSRP1Q08945 709 aaKnown RBP9.36□□□□□ -0.91
CDC42SE1-201ENST00000357235 NR5A1Q13285 461 aa9.36□□□□□ -0.91
CDC42SE1-201ENST00000357235 PTPAQ15257 358 aa9.36□□□□□ -0.91
CDC42SE1-201ENST00000357235 RESP18Q5W5W9 173 aa9.36□□□□□ -0.91
CDC42SE1-201ENST00000357235 PROSER2Q86WR7 435 aaPredicted RBP9.36□□□□□ -0.91
CDC42SE1-201ENST00000357235 DIS3L2Q8IYB7 885 aaKnown RBP9.36□□□□□ -0.91
CDC42SE1-201ENST00000357235 SMYD4Q8IYR2 804 aaPredicted RBP9.36□□□□□ -0.91
CDC42SE1-201ENST00000357235 RHOXF2Q9BQY4 288 aa9.36□□□□□ -0.91
CDC42SE1-201ENST00000357235 MKRN1Q9UHC7 482 aaKnown RBP9.36□□□□□ -0.91
CDC42SE1-201ENST00000357235 MAN1B1Q9UKM7 699 aa9.36□□□□□ -0.91
CDC42SE1-201ENST00000357235 hCG_1642624A0A1W2PR95 340 aa9.36□□□□□ -0.91
CDC42SE1-201ENST00000357235 IRF6O14896 467 aa9.36□□□□□ -0.91
CDC42SE1-201ENST00000357235 PPP6R2O75170 966 aa9.36□□□□□ -0.91
CDC42SE1-201ENST00000357235 MCAMP43121 646 aa9.36□□□□□ -0.91
CDC42SE1-201ENST00000357235 KIF4BQ2VIQ3 1234 aa9.36□□□□□ -0.91
CDC42SE1-201ENST00000357235 FAM43BQ6ZT52 329 aaPredicted RBP9.36□□□□□ -0.91
CDC42SE1-201ENST00000357235 USP49Q70CQ1 688 aa9.36□□□□□ -0.91
CDC42SE1-201ENST00000357235 PPFIBP1Q86W92 1011 aa9.36□□□□□ -0.91
CDC42SE1-201ENST00000357235 EFCAB13Q8IY85 973 aa9.36□□□□□ -0.91
CDC42SE1-201ENST00000357235 GPR161Q8N6U8 529 aaKnown RBP9.36□□□□□ -0.91
CDC42SE1-201ENST00000357235 TC2NQ8N9U0 490 aa9.36□□□□□ -0.91
CDC42SE1-201ENST00000357235 GOLGA1Q92805 767 aa9.36□□□□□ -0.91
CDC42SE1-201ENST00000357235 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.36□□□□□ -0.91
CDC42SE1-201ENST00000357235 MRPL44Q9H9J2 332 aaKnown RBP9.36□□□□□ -0.91
CDC42SE1-201ENST00000357235 GPR108Q9NPR9 543 aa9.36□□□□□ -0.91
CDC42SE1-201ENST00000357235 HPSEQ9Y251 543 aa9.36□□□□□ -0.91
CDC42SE1-201ENST00000357235 ANKRD65E5RJM6 399 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms