RNA–Protein interactions for RNA: ENST00000355301.8

NPHP1-202, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 1,932 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-202ENST00000355301 PRMT6Q96LA8 375 aaPredicted RBP11.32□□□□□ -0.6
NPHP1-202ENST00000355301 OSBPL5Q9H0X9 879 aaPredicted RBP11.32□□□□□ -0.6
NPHP1-202ENST00000355301 SAP30BPQ9UHR5 308 aaKnown RBP11.32□□□□□ -0.6
NPHP1-202ENST00000355301 CIZ1Q9ULV3 898 aaPredicted RBP11.32□□□□□ -0.6
NPHP1-202ENST00000355301 SBF1O95248 1867 aa11.32□□□□□ -0.6
NPHP1-202ENST00000355301 SH2B2O14492 632 aaPredicted RBP11.31□□□□□ -0.6
NPHP1-202ENST00000355301 PRDM1O75626 825 aa11.31□□□□□ -0.6
NPHP1-202ENST00000355301 LIFRP42702 1097 aa11.31□□□□□ -0.6
NPHP1-202ENST00000355301 EIF6P56537 245 aaKnown RBP11.31□□□□□ -0.6
NPHP1-202ENST00000355301 APOBRQ0VD83 1088 aa11.31□□□□□ -0.6
NPHP1-202ENST00000355301 ST3GAL1Q11201 340 aa11.31□□□□□ -0.6
NPHP1-202ENST00000355301 NFIAQ12857 509 aa11.31□□□□□ -0.6
NPHP1-202ENST00000355301 PICALMQ13492 652 aa11.31□□□□□ -0.6
NPHP1-202ENST00000355301 GPHNQ9NQX3 736 aaPredicted RBP11.31□□□□□ -0.6
NPHP1-202ENST00000355301 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.31□□□□□ -0.6
NPHP1-202ENST00000355301 PFKFB2O60825 505 aa11.31□□□□□ -0.6
NPHP1-202ENST00000355301 YBX3P16989 372 aaKnown RBP eCLIP11.31□□□□□ -0.6
NPHP1-202ENST00000355301 SART3Q15020 963 aaKnown RBP11.31□□□□□ -0.6
NPHP1-202ENST00000355301 DLGAP5Q15398 846 aa11.31□□□□□ -0.6
NPHP1-202ENST00000355301 SLC4A8Q2Y0W8 1093 aa11.31□□□□□ -0.6
NPHP1-202ENST00000355301 C16orf86Q6ZW13 317 aa11.31□□□□□ -0.6
NPHP1-202ENST00000355301 TTC6Q86TZ1 520 aa11.31□□□□□ -0.6
NPHP1-202ENST00000355301 SGMS1Q86VZ5 419 aa11.31□□□□□ -0.6
NPHP1-202ENST00000355301 CCDC83Q8IWF9 413 aa11.31□□□□□ -0.6
NPHP1-202ENST00000355301 DPF2Q92785 391 aa11.31□□□□□ -0.6
NPHP1-202ENST00000355301 GTF3C6Q969F1 213 aa11.31□□□□□ -0.6
NPHP1-202ENST00000355301 ZNF287Q9HBT7 754 aa11.31□□□□□ -0.6
NPHP1-202ENST00000355301 CHMP5Q9NZZ3 219 aa11.31□□□□□ -0.6
NPHP1-202ENST00000355301 IFIT3O14879 490 aaKnown RBP11.3□□□□□ -0.6
NPHP1-202ENST00000355301 RANBP6O60518 1105 aaKnown RBP11.3□□□□□ -0.6
NPHP1-202ENST00000355301 PDIA3P30101 505 aaKnown RBP11.3□□□□□ -0.6
NPHP1-202ENST00000355301 ZNF280AP59817 542 aaPredicted RBP11.3□□□□□ -0.6
NPHP1-202ENST00000355301 TMEM67Q5HYA8 995 aa11.3□□□□□ -0.6
NPHP1-202ENST00000355301 NECAB1Q8N987 351 aa11.3□□□□□ -0.6
NPHP1-202ENST00000355301 DYNLL2Q96FJ2 89 aa11.3□□□□□ -0.6
NPHP1-202ENST00000355301 ZBED3Q96IU2 234 aaPredicted RBP11.3□□□□□ -0.6
NPHP1-202ENST00000355301 TDRD3Q9H7E2 651 aaKnown RBP11.3□□□□□ -0.6
NPHP1-202ENST00000355301 LY9Q9HBG7 655 aa11.3□□□□□ -0.6
NPHP1-202ENST00000355301 FAM198AQ9UFP1 575 aa11.3□□□□□ -0.6
NPHP1-202ENST00000355301 GABPAQ06546 454 aa11.29□□□□□ -0.6
NPHP1-202ENST00000355301 IQCA1Q86XH1 822 aa11.29□□□□□ -0.6
NPHP1-202ENST00000355301 TMTC2Q8N394 836 aa11.29□□□□□ -0.6
NPHP1-202ENST00000355301 UBAC1Q9BSL1 405 aa11.29□□□□□ -0.6
NPHP1-202ENST00000355301 DHX36Q9H2U1 1008 aaKnown RBP11.29□□□□□ -0.6
NPHP1-202ENST00000355301 MKNK2Q9HBH9 465 aa11.29□□□□□ -0.6
NPHP1-202ENST00000355301 BRPF3Q9ULD4 1205 aa11.29□□□□□ -0.6
NPHP1-202ENST00000355301 COL2A1P02458 1487 aaPredicted RBP11.29□□□□□ -0.6
NPHP1-202ENST00000355301 ATRNL1Q5VV63 1379 aa11.29□□□□□ -0.6
NPHP1-202ENST00000355301 ZNF541Q9H0D2 1346 aa11.29□□□□□ -0.6
NPHP1-202ENST00000355301 KLF18A0A0U1RQI7 1052 aa11.29□□□□□ -0.6
NPHP1-202ENST00000355301 ERICH2A1L162 156 aa11.29□□□□□ -0.6
NPHP1-202ENST00000355301 ENTPD3O75355 529 aa11.29□□□□□ -0.6
NPHP1-202ENST00000355301 CDK8P49336 464 aa11.29□□□□□ -0.6
NPHP1-202ENST00000355301 CACNB3P54284 484 aa11.29□□□□□ -0.6
NPHP1-202ENST00000355301 SCRN1Q12765 414 aa11.29□□□□□ -0.6
NPHP1-202ENST00000355301 STK3Q13188 491 aa11.29□□□□□ -0.6
NPHP1-202ENST00000355301 SEC23AQ15436 765 aa11.29□□□□□ -0.6
NPHP1-202ENST00000355301 SPDYE2Q495Y8 402 aa11.29□□□□□ -0.6
NPHP1-202ENST00000355301 CHMP4CQ96CF2 233 aa11.29□□□□□ -0.6
NPHP1-202ENST00000355301 ZSCAN10Q96SZ4 725 aaPredicted RBP11.29□□□□□ -0.6
NPHP1-202ENST00000355301 ZKSCAN3Q9BRR0 538 aa11.29□□□□□ -0.6
NPHP1-202ENST00000355301 EHD4Q9H223 541 aa11.29□□□□□ -0.6
NPHP1-202ENST00000355301 MYOZ2Q9NPC6 264 aa11.29□□□□□ -0.6
NPHP1-202ENST00000355301 SERPINB13Q9UIV8 391 aa11.29□□□□□ -0.6
NPHP1-202ENST00000355301 TAOK2Q9UL54 1235 aa11.29□□□□□ -0.6
NPHP1-202ENST00000355301 TNKSO95271 1327 aa11.28□□□□□ -0.6
NPHP1-202ENST00000355301 TSPY2A6NKD2 308 aa11.28□□□□□ -0.6
NPHP1-202ENST00000355301 HLA-DOAP06340 250 aa11.28□□□□□ -0.6
NPHP1-202ENST00000355301 GMPSP49915 693 aaPredicted RBP11.28□□□□□ -0.6
NPHP1-202ENST00000355301 WTAPQ15007 396 aa11.28□□□□□ -0.6
NPHP1-202ENST00000355301 FKBP1CQ5VVH2 108 aa11.28□□□□□ -0.6
NPHP1-202ENST00000355301 APOA5Q6Q788 366 aa11.28□□□□□ -0.6
NPHP1-202ENST00000355301 ZFPM1Q8IX07 1006 aa11.28□□□□□ -0.6
NPHP1-202ENST00000355301 ENAHQ8N8S7 591 aaPredicted RBP11.28□□□□□ -0.6
NPHP1-202ENST00000355301 SLC44A5Q8NCS7 719 aa11.28□□□□□ -0.6
NPHP1-202ENST00000355301 SENP2Q9HC62 589 aa11.28□□□□□ -0.6
NPHP1-202ENST00000355301 TMOD2Q9NZR1 351 aa11.28□□□□□ -0.6
NPHP1-202ENST00000355301 HPS5Q9UPZ3 1129 aa11.28□□□□□ -0.6
NPHP1-202ENST00000355301 GOLGA8BA8MQT2 603 aa11.27□□□□□ -0.6
NPHP1-202ENST00000355301 WNT10BO00744 389 aa11.27□□□□□ -0.6
NPHP1-202ENST00000355301 RASA1P20936 1047 aa11.27□□□□□ -0.6
NPHP1-202ENST00000355301 TFAP4Q01664 338 aa11.27□□□□□ -0.6
NPHP1-202ENST00000355301 TCP10Q12799 353 aa11.27□□□□□ -0.6
NPHP1-202ENST00000355301 FAM47AQ5JRC9 791 aa11.27□□□□□ -0.6
NPHP1-202ENST00000355301 ZNF444Q8N0Y2 327 aaPredicted RBP11.27□□□□□ -0.6
NPHP1-202ENST00000355301 GPC2Q8N158 579 aa11.27□□□□□ -0.6
NPHP1-202ENST00000355301 LLPHQ9BRT6 129 aaKnown RBP11.27□□□□□ -0.6
NPHP1-202ENST00000355301 TCP11L1Q9NUJ3 509 aa11.27□□□□□ -0.6
NPHP1-202ENST00000355301 ZNF70Q9UC06 446 aaPredicted RBP11.27□□□□□ -0.6
NPHP1-202ENST00000355301 SWAP70Q9UH65 585 aa11.27□□□□□ -0.6
NPHP1-202ENST00000355301 SMC3Q9UQE7 1217 aa11.27□□□□□ -0.6
NPHP1-202ENST00000355301 GJA3Q9Y6H8 435 aa11.27□□□□□ -0.6
NPHP1-202ENST00000355301 SIPA1L1O43166 1804 aa11.27□□□□□ -0.61
NPHP1-202ENST00000355301 SHTN1A0MZ66 631 aa11.27□□□□□ -0.61
NPHP1-202ENST00000355301 DDTLA6NHG4 134 aaPredicted RBP11.27□□□□□ -0.61
NPHP1-202ENST00000355301 CCDC69A6NI79 296 aa11.27□□□□□ -0.61
NPHP1-202ENST00000355301 MYO1BO43795 1136 aa11.27□□□□□ -0.61
NPHP1-202ENST00000355301 RCAN1P53805 252 aa11.27□□□□□ -0.61
NPHP1-202ENST00000355301 NUCB2P80303 420 aa11.27□□□□□ -0.61
NPHP1-202ENST00000355301 NFXL1Q6ZNB6 911 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms