RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 RTL1A6NKG5 1358 aa8.9□□□□□ -0.99
SCN8A-201ENST00000354534 RGS16O15492 202 aaPredicted RBP8.9□□□□□ -0.99
SCN8A-201ENST00000354534 BRD3Q15059 726 aa8.9□□□□□ -0.99
SCN8A-201ENST00000354534 E2F5Q15329 346 aa8.9□□□□□ -0.99
SCN8A-201ENST00000354534 MFSD6Q6ZSS7 791 aa8.9□□□□□ -0.99
SCN8A-201ENST00000354534 MRPL28Q13084 256 aaKnown RBP8.89□□□□□ -0.99
SCN8A-201ENST00000354534 USP48Q86UV5 1035 aa8.89□□□□□ -0.99
SCN8A-201ENST00000354534 TEKT1Q969V4 418 aa8.89□□□□□ -0.99
SCN8A-201ENST00000354534 NAP1L4Q99733 375 aaKnown RBP8.89□□□□□ -0.99
SCN8A-201ENST00000354534 IFT122Q9HBG6 1241 aa8.89□□□□□ -0.99
SCN8A-201ENST00000354534 HMG20BQ9P0W2 317 aa8.89□□□□□ -0.99
SCN8A-201ENST00000354534 USTQ9Y2C2 406 aa8.89□□□□□ -0.99
SCN8A-201ENST00000354534 LRRC9Q6ZRR7 1453 aa8.89□□□□□ -0.99
SCN8A-201ENST00000354534 SKIP12755 728 aa8.89□□□□□ -0.99
SCN8A-201ENST00000354534 FOSL2P15408 326 aa8.89□□□□□ -0.99
SCN8A-201ENST00000354534 ZC3H12BQ5HYM0 836 aaKnown RBP8.89□□□□□ -0.99
SCN8A-201ENST00000354534 WDR44Q5JSH3 913 aa8.89□□□□□ -0.99
SCN8A-201ENST00000354534 CFAP70Q5T0N1 1121 aa8.89□□□□□ -0.99
SCN8A-201ENST00000354534 PSMB7Q99436 277 aa8.89□□□□□ -0.99
SCN8A-201ENST00000354534 NEUROG2Q9H2A3 272 aa8.89□□□□□ -0.99
SCN8A-201ENST00000354534 ERBINQ96RT1 1412 aa8.89□□□□□ -0.99
SCN8A-201ENST00000354534 HDAC11Q96DB2 347 aa8.89□□□□□ -0.99
SCN8A-201ENST00000354534 TSC22D3Q99576 134 aa8.89□□□□□ -0.99
SCN8A-201ENST00000354534 SNX1Q13596 522 aa8.89□□□□□ -0.99
SCN8A-201ENST00000354534 KLHL40Q2TBA0 621 aa8.89□□□□□ -0.99
SCN8A-201ENST00000354534 SKA2Q8WVK7 121 aaPredicted RBP8.89□□□□□ -0.99
SCN8A-201ENST00000354534 FGD4Q96M96 766 aa8.89□□□□□ -0.99
SCN8A-201ENST00000354534 TBC1D2Q9BYX2 928 aa8.89□□□□□ -0.99
SCN8A-201ENST00000354534 SAT1P21673 171 aa8.89□□□□□ -0.99
SCN8A-201ENST00000354534 HAND2P61296 217 aa8.89□□□□□ -0.99
SCN8A-201ENST00000354534 FAM200AQ8TCP9 573 aa8.89□□□□□ -0.99
SCN8A-201ENST00000354534 PLEKHA4Q9H4M7 779 aa8.89□□□□□ -0.99
SCN8A-201ENST00000354534 VPS37BQ9H9H4 285 aa8.89□□□□□ -0.99
SCN8A-201ENST00000354534 DDX28Q9NUL7 540 aaKnown RBP8.89□□□□□ -0.99
SCN8A-201ENST00000354534 CAPN11Q9UMQ6 739 aa8.89□□□□□ -0.99
SCN8A-201ENST00000354534 H3BRJ5 948 aa8.89□□□□□ -0.99
SCN8A-201ENST00000354534 OCM2P0CE71 109 aa8.89□□□□□ -0.99
SCN8A-201ENST00000354534 OCMP0CE72 109 aaPredicted RBP8.89□□□□□ -0.99
SCN8A-201ENST00000354534 GABPB1Q06547 395 aaPredicted RBP8.89□□□□□ -0.99
SCN8A-201ENST00000354534 ELF2Q15723 593 aa8.89□□□□□ -0.99
SCN8A-201ENST00000354534 KRT71Q3SY84 523 aa8.89□□□□□ -0.99
SCN8A-201ENST00000354534 TRIM59Q8IWR1 403 aa8.89□□□□□ -0.99
SCN8A-201ENST00000354534 ACRBPQ8NEB7 543 aa8.89□□□□□ -0.99
SCN8A-201ENST00000354534 CCDC15Q0P6D6 951 aa8.89□□□□□ -0.99
SCN8A-201ENST00000354534 IFIT1BQ5T764 474 aaKnown RBP8.89□□□□□ -0.99
SCN8A-201ENST00000354534 HS2ST1Q7LGA3 356 aa8.89□□□□□ -0.99
SCN8A-201ENST00000354534 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.89□□□□□ -0.99
SCN8A-201ENST00000354534 DIABLOQ9NR28 239 aa8.89□□□□□ -0.99
SCN8A-201ENST00000354534 KLHL7Q8IXQ5 586 aa8.89□□□□□ -0.99
SCN8A-201ENST00000354534 POLE3Q9NRF9 147 aa8.89□□□□□ -0.99
SCN8A-201ENST00000354534 ATP1A2P50993 1020 aa8.89□□□□□ -0.99
SCN8A-201ENST00000354534 RCN2Q14257 317 aa8.88□□□□□ -0.99
SCN8A-201ENST00000354534 CCDC105Q8IYK2 499 aa8.88□□□□□ -0.99
SCN8A-201ENST00000354534 SPATA17Q96L03 361 aa8.88□□□□□ -0.99
SCN8A-201ENST00000354534 DBNLQ9UJU6 430 aaKnown RBP8.88□□□□□ -0.99
SCN8A-201ENST00000354534 ZNF711Q9Y462 761 aa8.88□□□□□ -0.99
SCN8A-201ENST00000354534 GSTA4O15217 222 aa8.88□□□□□ -0.99
SCN8A-201ENST00000354534 KRT14P02533 472 aa8.88□□□□□ -0.99
SCN8A-201ENST00000354534 MCF2P10911 925 aa8.88□□□□□ -0.99
SCN8A-201ENST00000354534 SLC12A1Q13621 1099 aa8.88□□□□□ -0.99
SCN8A-201ENST00000354534 HS1BP3Q53T59 392 aa8.88□□□□□ -0.99
SCN8A-201ENST00000354534 SLC5A1P13866 664 aa8.88□□□□□ -0.99
SCN8A-201ENST00000354534 RFX1P22670 979 aa8.88□□□□□ -0.99
SCN8A-201ENST00000354534 SCYL3Q8IZE3 742 aa8.88□□□□□ -0.99
SCN8A-201ENST00000354534 SH3GL3Q99963 347 aa8.88□□□□□ -0.99
SCN8A-201ENST00000354534 CCDC8Q9H0W5 538 aaPredicted RBP8.88□□□□□ -0.99
SCN8A-201ENST00000354534 TNFAIP3P21580 790 aa8.88□□□□□ -0.99
SCN8A-201ENST00000354534 ALG1Q9BT22 464 aa8.88□□□□□ -0.99
SCN8A-201ENST00000354534 CARD6Q9BX69 1037 aa8.88□□□□□ -0.99
SCN8A-201ENST00000354534 SUCLA2Q9P2R7 463 aaPredicted RBP8.88□□□□□ -0.99
SCN8A-201ENST00000354534 KRT75O95678 551 aa8.88□□□□□ -0.99
SCN8A-201ENST00000354534 OCA2Q04671 838 aa8.88□□□□□ -0.99
SCN8A-201ENST00000354534 TSTA3Q13630 321 aaPredicted RBP8.88□□□□□ -0.99
SCN8A-201ENST00000354534 EP400NLQ6ZTU2 488 aa8.88□□□□□ -0.99
SCN8A-201ENST00000354534 ZSCAN22P10073 491 aaPredicted RBP8.88□□□□□ -0.99
SCN8A-201ENST00000354534 CDV3Q9UKY7 258 aaKnown RBP8.88□□□□□ -0.99
SCN8A-201ENST00000354534 PAK2Q13177 524 aa8.88□□□□□ -0.99
SCN8A-201ENST00000354534 MTMR3Q13615 1198 aa8.88□□□□□ -0.99
SCN8A-201ENST00000354534 FNBP1Q96RU3 617 aa8.88□□□□□ -0.99
SCN8A-201ENST00000354534 CABP5Q9NP86 173 aa8.88□□□□□ -0.99
SCN8A-201ENST00000354534 EFCAB5A4FU69 1503 aa8.88□□□□□ -0.99
SCN8A-201ENST00000354534 hCG_2014768A0A024R1R8 64 aa8.88□□□□□ -0.99
SCN8A-201ENST00000354534 ACBD5Q5T8D3 534 aaPredicted RBP8.88□□□□□ -0.99
SCN8A-201ENST00000354534 LIN9Q5TKA1 542 aa8.88□□□□□ -0.99
SCN8A-201ENST00000354534 TMCO5AQ8N6Q1 288 aa8.88□□□□□ -0.99
SCN8A-201ENST00000354534 TEX9Q8N6V9 391 aa8.88□□□□□ -0.99
SCN8A-201ENST00000354534 C6orf50Q9HD87 102 aa8.88□□□□□ -0.99
SCN8A-201ENST00000354534 EPB41P11171 864 aaKnown RBP8.87□□□□□ -0.99
SCN8A-201ENST00000354534 ASIC2Q16515 512 aa8.87□□□□□ -0.99
SCN8A-201ENST00000354534 FSCBQ5H9T9 825 aa8.87□□□□□ -0.99
SCN8A-201ENST00000354534 STX8Q9UNK0 236 aa8.87□□□□□ -0.99
SCN8A-201ENST00000354534 SPDYE2BA6NHP3 402 aa8.87□□□□□ -0.99
SCN8A-201ENST00000354534 SART1O43290 800 aaKnown RBP8.87□□□□□ -0.99
SCN8A-201ENST00000354534 SPDYE6P0CI01 402 aa8.87□□□□□ -0.99
SCN8A-201ENST00000354534 TYRO3Q06418 890 aa8.87□□□□□ -0.99
SCN8A-201ENST00000354534 RSAD2Q8WXG1 361 aa8.87□□□□□ -0.99
SCN8A-201ENST00000354534 CCDC141Q6ZP82 1450 aa8.87□□□□□ -0.99
SCN8A-201ENST00000354534 SYCE1LA8MT33 242 aa8.87□□□□□ -0.99
SCN8A-201ENST00000354534 JPH2Q9BR39 696 aaPredicted RBP8.87□□□□□ -0.99
SCN8A-201ENST00000354534 SLC24A3Q9HC58 644 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms