RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 DDX60LQ5H9U9 1706 aaKnown RBP16.64■□□□□ 0.25
TPM4-202ENST00000344824 COL2A1P02458 1487 aaPredicted RBP16.64■□□□□ 0.25
TPM4-202ENST00000344824 TTC41PQ6P2S7 1318 aa16.63■□□□□ 0.25
TPM4-202ENST00000344824 ZNF532Q9HCE3 1301 aa16.63■□□□□ 0.25
TPM4-202ENST00000344824 CCL15-CCL14A0A0B4J2E2 113 aa16.63■□□□□ 0.25
TPM4-202ENST00000344824 SPDYE5A6NIY4 337 aa16.63■□□□□ 0.25
TPM4-202ENST00000344824 IGF2BP3O00425 579 aaKnown RBP eCLIP16.63■□□□□ 0.25
TPM4-202ENST00000344824 TM4SF4P48230 202 aa16.63■□□□□ 0.25
TPM4-202ENST00000344824 CCL15Q16663 113 aa16.63■□□□□ 0.25
TPM4-202ENST00000344824 ERO1BQ86YB8 467 aa16.63■□□□□ 0.25
TPM4-202ENST00000344824 TRIM34Q9BYJ4 488 aa16.63■□□□□ 0.25
TPM4-202ENST00000344824 OSBPL3Q9H4L5 887 aa16.63■□□□□ 0.25
TPM4-202ENST00000344824 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.63■□□□□ 0.25
TPM4-202ENST00000344824 ERC2O15083 957 aa16.62■□□□□ 0.25
TPM4-202ENST00000344824 IGSF3O75054 1194 aa16.62■□□□□ 0.25
TPM4-202ENST00000344824 GSPT1P15170 499 aaKnown RBP16.62■□□□□ 0.25
TPM4-202ENST00000344824 GTF2A2P52657 109 aa16.62■□□□□ 0.25
TPM4-202ENST00000344824 PPP4CP60510 307 aa16.62■□□□□ 0.25
TPM4-202ENST00000344824 IFNL1Q8IU54 200 aa16.62■□□□□ 0.25
TPM4-202ENST00000344824 PI4K2BQ8TCG2 481 aa16.62■□□□□ 0.25
TPM4-202ENST00000344824 HAUS7Q99871 368 aa16.62■□□□□ 0.25
TPM4-202ENST00000344824 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.62■□□□□ 0.252e-11■□□□□ 8.1
TPM4-202ENST00000344824 MAGEB6P1A0A0J9YX57 407 aa16.62■□□□□ 0.25
TPM4-202ENST00000344824 CAPN15O75808 1086 aa16.62■□□□□ 0.25
TPM4-202ENST00000344824 GLRX3O76003 335 aaKnown RBP16.62■□□□□ 0.25
TPM4-202ENST00000344824 PPIL2Q13356 520 aa16.62■□□□□ 0.25
TPM4-202ENST00000344824 OTUD7BQ6GQQ9 843 aa16.62■□□□□ 0.25
TPM4-202ENST00000344824 CRACR2BQ8N4Y2 399 aaPredicted RBP16.62■□□□□ 0.25
TPM4-202ENST00000344824 PICK1Q9NRD5 415 aa16.62■□□□□ 0.25
TPM4-202ENST00000344824 ZNF112Q9UJU3 913 aa16.62■□□□□ 0.25
TPM4-202ENST00000344824 TRIM6-TRIM34B2RNG4 842 aa16.61■□□□□ 0.25
TPM4-202ENST00000344824 IRF6O14896 467 aa16.61■□□□□ 0.25
TPM4-202ENST00000344824 ALDH1A1P00352 501 aa16.61■□□□□ 0.25
TPM4-202ENST00000344824 HLA-DOAP06340 250 aa16.61■□□□□ 0.25
TPM4-202ENST00000344824 INHBEP58166 350 aa16.61■□□□□ 0.25
TPM4-202ENST00000344824 SCYL3Q8IZE3 742 aa16.61■□□□□ 0.25
TPM4-202ENST00000344824 RILPL2Q969X0 211 aa16.61■□□□□ 0.25
TPM4-202ENST00000344824 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.61■□□□□ 0.25
TPM4-202ENST00000344824 PALD1Q9ULE6 856 aa16.61■□□□□ 0.25
TPM4-202ENST00000344824 PPATQ06203 517 aa16.6■□□□□ 0.25
TPM4-202ENST00000344824 SNAPC2Q13487 334 aa16.6■□□□□ 0.25
TPM4-202ENST00000344824 SLFNL1Q499Z3 407 aa16.6■□□□□ 0.25
TPM4-202ENST00000344824 NOL9Q5SY16 702 aaKnown RBP16.6■□□□□ 0.25
TPM4-202ENST00000344824 CERS3Q8IU89 383 aa16.6■□□□□ 0.25
TPM4-202ENST00000344824 BRI3BPQ8WY22 251 aa16.6■□□□□ 0.25
TPM4-202ENST00000344824 DHX36Q9H2U1 1008 aaKnown RBP16.6■□□□□ 0.25
TPM4-202ENST00000344824 PHF20L1A8MW92 1017 aa16.59■□□□□ 0.25
TPM4-202ENST00000344824 CETPP11597 493 aa16.59■□□□□ 0.25
TPM4-202ENST00000344824 ADD2P35612 726 aa16.59■□□□□ 0.25
TPM4-202ENST00000344824 TAF1CQ15572 869 aaPredicted RBP16.59■□□□□ 0.25
TPM4-202ENST00000344824 BMP2KLQ5H9B9 411 aa16.59■□□□□ 0.25
TPM4-202ENST00000344824 TMED8Q6PL24 325 aaPredicted RBP16.59■□□□□ 0.25
TPM4-202ENST00000344824 CCDC84Q86UT8 332 aaPredicted RBP16.59■□□□□ 0.25
TPM4-202ENST00000344824 LCORLQ8N3X6 602 aa16.59■□□□□ 0.25
TPM4-202ENST00000344824 MS4A4AQ96JQ5 239 aa16.59■□□□□ 0.25
TPM4-202ENST00000344824 CRNKL1Q9BZJ0 848 aaKnown RBP16.59■□□□□ 0.25
TPM4-202ENST00000344824 ARMT1Q9H993 441 aa16.59■□□□□ 0.25
TPM4-202ENST00000344824 MBD4O95243 580 aa16.58■□□□□ 0.24
TPM4-202ENST00000344824 CHGBP05060 677 aa16.58■□□□□ 0.24
TPM4-202ENST00000344824 SDSP20132 328 aa16.58■□□□□ 0.24
TPM4-202ENST00000344824 DGKZQ13574 1117 aa16.58■□□□□ 0.24
TPM4-202ENST00000344824 PTPN18Q99952 460 aa16.58■□□□□ 0.24
TPM4-202ENST00000344824 RIOK1Q9BRS2 568 aaKnown RBP16.58■□□□□ 0.24
TPM4-202ENST00000344824 R3HDMLQ9H3Y0 253 aa16.58■□□□□ 0.24
TPM4-202ENST00000344824 PI4KBQ9UBF8 816 aa16.58■□□□□ 0.24
TPM4-202ENST00000344824 TCRBV5S4A2TA0A5A2 114 aa16.57■□□□□ 0.24
TPM4-202ENST00000344824 GPR25O00155 361 aa16.57■□□□□ 0.24
TPM4-202ENST00000344824 CTNND1O60716 968 aaKnown RBP16.57■□□□□ 0.24
TPM4-202ENST00000344824 CRHR2Q13324 411 aa16.57■□□□□ 0.24
TPM4-202ENST00000344824 ZSCAN25Q6NSZ9 544 aa16.57■□□□□ 0.24
TPM4-202ENST00000344824 FAM43AQ8N2R8 423 aa16.57■□□□□ 0.24
TPM4-202ENST00000344824 SDR42E1Q8WUS8 393 aa16.57■□□□□ 0.24
TPM4-202ENST00000344824 ZNF296Q8WUU4 475 aaPredicted RBP16.57■□□□□ 0.24
TPM4-202ENST00000344824 HERC5Q9UII4 1024 aaKnown RBP16.57■□□□□ 0.24
TPM4-202ENST00000344824 ZHX2Q9Y6X8 837 aa16.57■□□□□ 0.24
TPM4-202ENST00000344824 ZSWIM8A7E2V4 1837 aa16.56■□□□□ 0.24
TPM4-202ENST00000344824 TRIM75PA6NK02 468 aa16.56■□□□□ 0.24
TPM4-202ENST00000344824 TBC1D12O60347 775 aa16.56■□□□□ 0.24
TPM4-202ENST00000344824 GDF11O95390 407 aa16.56■□□□□ 0.24
TPM4-202ENST00000344824 PTPRAP18433 802 aa16.56■□□□□ 0.24
TPM4-202ENST00000344824 LOC285556D6RIA3 1793 aa16.56■□□□□ 0.24
TPM4-202ENST00000344824 TESPA1A2RU30 521 aaPredicted RBP16.55■□□□□ 0.24
TPM4-202ENST00000344824 POLR3DP05423 398 aaPredicted RBP16.55■□□□□ 0.24
TPM4-202ENST00000344824 IFFO2Q5TF58 517 aa16.55■□□□□ 0.24
TPM4-202ENST00000344824 GADL1Q6ZQY3 521 aa16.55■□□□□ 0.24
TPM4-202ENST00000344824 FSD1Q9BTV5 496 aa16.55■□□□□ 0.24
TPM4-202ENST00000344824 DNAJC18Q9H819 358 aa16.55■□□□□ 0.24
TPM4-202ENST00000344824 MCM9Q9NXL9 1143 aa16.55■□□□□ 0.24
TPM4-202ENST00000344824 BTBD19C9JJ37 291 aa16.54■□□□□ 0.24
TPM4-202ENST00000344824 FKTNO75072 461 aa16.54■□□□□ 0.24
TPM4-202ENST00000344824 CAP2P40123 477 aa16.54■□□□□ 0.24
TPM4-202ENST00000344824 MAP3K10Q02779 954 aa16.54■□□□□ 0.24
TPM4-202ENST00000344824 KBTBD3Q8NAB2 608 aa16.54■□□□□ 0.24
TPM4-202ENST00000344824 MCOLN1Q9GZU1 580 aa16.54■□□□□ 0.24
TPM4-202ENST00000344824 ZFYVE28Q9HCC9 887 aa16.54■□□□□ 0.24
TPM4-202ENST00000344824 KCNH4Q9UQ05 1017 aa16.54■□□□□ 0.24
TPM4-202ENST00000344824 PRKAB2O43741 272 aa16.53■□□□□ 0.24
TPM4-202ENST00000344824 RRP1BQ14684 758 aaKnown RBP16.53■□□□□ 0.24
TPM4-202ENST00000344824 UBE3CQ15386 1083 aa16.53■□□□□ 0.24
TPM4-202ENST00000344824 TTC6Q86TZ1 520 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms