RNA–Protein interactions for RNA: ENST00000341290.6

PERM1-201, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PERM1, Length 3,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-201ENST00000341290 SH2B2O14492 632 aaPredicted RBP17.52■□□□□ 0.4
PERM1-201ENST00000341290 ITGA6P23229 1130 aa17.52■□□□□ 0.4
PERM1-201ENST00000341290 TRIM29Q14134 588 aa17.52■□□□□ 0.4
PERM1-201ENST00000341290 UBXN4Q92575 508 aa17.52■□□□□ 0.4
PERM1-201ENST00000341290 MAP3K14Q99558 947 aa17.52■□□□□ 0.4
PERM1-201ENST00000341290 KCND1Q9NSA2 647 aa17.52■□□□□ 0.4
PERM1-201ENST00000341290 IKBKBO14920 756 aa17.52■□□□□ 0.39
PERM1-201ENST00000341290 TRIM65Q6PJ69 517 aa17.52■□□□□ 0.39
PERM1-201ENST00000341290 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.52■□□□□ 0.39
PERM1-201ENST00000341290 INTS13Q9NVM9 706 aa17.52■□□□□ 0.39
PERM1-201ENST00000341290 TUBE1Q9UJT0 475 aa17.52■□□□□ 0.39
PERM1-201ENST00000341290 HPSEQ9Y251 543 aa17.52■□□□□ 0.39
PERM1-201ENST00000341290 ADD2P35612 726 aa17.51■□□□□ 0.39
PERM1-201ENST00000341290 PHKA1P46020 1223 aa17.51■□□□□ 0.39
PERM1-201ENST00000341290 HLFQ16534 295 aa17.51■□□□□ 0.39
PERM1-201ENST00000341290 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.51■□□□□ 0.39
PERM1-201ENST00000341290 DESI2Q9BSY9 194 aa17.51■□□□□ 0.39
PERM1-201ENST00000341290 UBN2Q6ZU65 1347 aa17.51■□□□□ 0.39
PERM1-201ENST00000341290 POLR3GO15318 223 aaPredicted RBP17.51■□□□□ 0.39
PERM1-201ENST00000341290 PRR29P0C7W0 189 aa17.51■□□□□ 0.39
PERM1-201ENST00000341290 H2AFXP16104 143 aaPredicted RBP17.51■□□□□ 0.39
PERM1-201ENST00000341290 CCDC102BQ68D86 513 aa17.51■□□□□ 0.39
PERM1-201ENST00000341290 ISCA1Q9BUE6 129 aa17.51■□□□□ 0.39
PERM1-201ENST00000341290 ATG3Q9NT62 314 aa17.51■□□□□ 0.39
PERM1-201ENST00000341290 TMOD3Q9NYL9 352 aa17.51■□□□□ 0.39
PERM1-201ENST00000341290 FHOD1Q9Y613 1164 aa17.51■□□□□ 0.39
PERM1-201ENST00000341290 KRBA2Q6ZNG9 492 aa17.5■□□□□ 0.39
PERM1-201ENST00000341290 VSTM4Q8IW00 320 aa17.5■□□□□ 0.39
PERM1-201ENST00000341290 REXO1L1PQ8IX06 675 aa17.5■□□□□ 0.39
PERM1-201ENST00000341290 DNAJC10Q8IXB1 793 aa17.5■□□□□ 0.39
PERM1-201ENST00000341290 JMYQ8N9B5 988 aa17.5■□□□□ 0.39
PERM1-201ENST00000341290 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.5■□□□□ 0.39
PERM1-201ENST00000341290 FMR1Q06787 632 aaKnown RBP eCLIP17.5■□□□□ 0.39
PERM1-201ENST00000341290 RESP18Q5W5W9 173 aa17.5■□□□□ 0.39
PERM1-201ENST00000341290 WDR24Q96S15 920 aa17.5■□□□□ 0.39
PERM1-201ENST00000341290 IFIT3O14879 490 aaKnown RBP17.5■□□□□ 0.39
PERM1-201ENST00000341290 POLR2DO15514 142 aaKnown RBP17.5■□□□□ 0.39
PERM1-201ENST00000341290 CPLX2Q6PUV4 134 aaKnown RBP17.5■□□□□ 0.39
PERM1-201ENST00000341290 TOGARAM2Q6ZUX3 1019 aa17.5■□□□□ 0.39
PERM1-201ENST00000341290 TICAM2Q86XR7 235 aa17.5■□□□□ 0.39
PERM1-201ENST00000341290 AIDAQ96BJ3 306 aa17.5■□□□□ 0.39
PERM1-201ENST00000341290 ZSWIM4Q9H7M6 989 aa17.5■□□□□ 0.39
PERM1-201ENST00000341290 FAM217BQ9NTX9 383 aaPredicted RBP17.5■□□□□ 0.39
PERM1-201ENST00000341290 ZSWIM5Q9P217 1185 aa17.5■□□□□ 0.39
PERM1-201ENST00000341290 GNG11P61952 73 aa17.49■□□□□ 0.39
PERM1-201ENST00000341290 IRX3P78415 501 aaPredicted RBP17.49■□□□□ 0.39
PERM1-201ENST00000341290 ASAP1Q9ULH1 1129 aa17.49■□□□□ 0.39
PERM1-201ENST00000341290 NR5A1Q13285 461 aa17.49■□□□□ 0.39
PERM1-201ENST00000341290 KARSQ15046 597 aaKnown RBP17.49■□□□□ 0.39
PERM1-201ENST00000341290 IGDCC4Q8TDY8 1250 aa17.49■□□□□ 0.39
PERM1-201ENST00000341290 SMARCC1Q92922 1105 aaPredicted RBP17.49■□□□□ 0.39
PERM1-201ENST00000341290 LY9Q9HBG7 655 aa17.49■□□□□ 0.39
PERM1-201ENST00000341290 PPP2R2CQ9Y2T4 447 aa17.49■□□□□ 0.39
PERM1-201ENST00000341290 SLC12A7Q9Y666 1083 aa17.49■□□□□ 0.39
PERM1-201ENST00000341290 TACC3Q9Y6A5 838 aa17.49■□□□□ 0.39
PERM1-201ENST00000341290 UBR3Q6ZT12 1888 aa17.49■□□□□ 0.39
PERM1-201ENST00000341290 ANKRD36CQ5JPF3 1778 aa17.48■□□□□ 0.39
PERM1-201ENST00000341290 KAT6BQ8WYB5 2073 aa17.48■□□□□ 0.39
PERM1-201ENST00000341290 PPP6R2O75170 966 aa17.48■□□□□ 0.39
PERM1-201ENST00000341290 CDKL5O76039 1030 aa17.48■□□□□ 0.39
PERM1-201ENST00000341290 C4BP0C0L5 1744 aa17.48■□□□□ 0.39
PERM1-201ENST00000341290 PNMA6AP0CW24 399 aaPredicted RBP17.48■□□□□ 0.39
PERM1-201ENST00000341290 PDE6AP16499 860 aa17.48■□□□□ 0.39
PERM1-201ENST00000341290 BMS1Q14692 1282 aaKnown RBP17.48■□□□□ 0.39
PERM1-201ENST00000341290 NTRK3Q16288 839 aa17.48■□□□□ 0.39
PERM1-201ENST00000341290 USP49Q70CQ1 688 aa17.48■□□□□ 0.39
PERM1-201ENST00000341290 NFE2L3Q9Y4A8 694 aa17.48■□□□□ 0.39
PERM1-201ENST00000341290 RIPOR2Q9Y4F9 1068 aa17.48■□□□□ 0.39
PERM1-201ENST00000341290 VWA3AA6NCI4 1184 aa17.48■□□□□ 0.39
PERM1-201ENST00000341290 CBFA2T2O43439 604 aa17.48■□□□□ 0.39
PERM1-201ENST00000341290 PRKAB2O43741 272 aa17.48■□□□□ 0.39
PERM1-201ENST00000341290 KIF6Q6ZMV9 814 aa17.48■□□□□ 0.39
PERM1-201ENST00000341290 NOL10Q9BSC4 688 aaKnown RBP17.48■□□□□ 0.39
PERM1-201ENST00000341290 IRX2Q9BZI1 471 aaPredicted RBP17.48■□□□□ 0.39
PERM1-201ENST00000341290 ARMT1Q9H993 441 aa17.48■□□□□ 0.39
PERM1-201ENST00000341290 SERTAD1Q9UHV2 236 aa17.48■□□□□ 0.39
PERM1-201ENST00000341290 COBLO75128 1261 aa17.47■□□□□ 0.39
PERM1-201ENST00000341290 CASP1P29466 404 aa17.47■□□□□ 0.39
PERM1-201ENST00000341290 CPLX3Q8WVH0 158 aa17.47■□□□□ 0.39
PERM1-201ENST00000341290 SEC31BQ9NQW1 1179 aa17.47■□□□□ 0.39
PERM1-201ENST00000341290 CALCOCO1Q9P1Z2 691 aa17.47■□□□□ 0.39
PERM1-201ENST00000341290 MYH14Q7Z406 1995 aaKnown RBP17.47■□□□□ 0.39
PERM1-201ENST00000341290 hCG_1642624A0A1W2PR95 340 aa17.47■□□□□ 0.39
PERM1-201ENST00000341290 SSRP1Q08945 709 aaKnown RBP17.47■□□□□ 0.39
PERM1-201ENST00000341290 MTF1Q14872 753 aa17.47■□□□□ 0.39
PERM1-201ENST00000341290 KRI1Q8N9T8 703 aaKnown RBP17.47■□□□□ 0.39
PERM1-201ENST00000341290 TTLL11Q8NHH1 800 aa17.47■□□□□ 0.39
PERM1-201ENST00000341290 NUP133Q8WUM0 1156 aa17.47■□□□□ 0.39
PERM1-201ENST00000341290 BAG1Q99933 345 aaPredicted RBP17.47■□□□□ 0.39
PERM1-201ENST00000341290 SAMSN1Q9NSI8 373 aaKnown RBP17.47■□□□□ 0.39
PERM1-201ENST00000341290 FAM53CQ9NYF3 392 aa17.47■□□□□ 0.39
PERM1-201ENST00000341290 MAN1B1Q9UKM7 699 aa17.47■□□□□ 0.39
PERM1-201ENST00000341290 PARP3Q9Y6F1 533 aa17.47■□□□□ 0.39
PERM1-201ENST00000341290 SPEF2Q9C093 1822 aa17.47■□□□□ 0.39
PERM1-201ENST00000341290 TOB1P50616 345 aaPredicted RBP17.47■□□□□ 0.39
PERM1-201ENST00000341290 TEX35Q5T0J7 233 aa17.47■□□□□ 0.39
PERM1-201ENST00000341290 KLHL10Q6JEL2 608 aa17.47■□□□□ 0.39
PERM1-201ENST00000341290 DIS3L2Q8IYB7 885 aaKnown RBP17.47■□□□□ 0.39
PERM1-201ENST00000341290 MAGEB6Q8N7X4 407 aa17.47■□□□□ 0.39
PERM1-201ENST00000341290 ZBTB38Q8NAP3 1195 aaPredicted RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms