RNA–Protein interactions for RNA: ENST00000340630.9

IFT27-201, Transcript of intraflagellar transport 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene IFT27, Length 1,113 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT27-201ENST00000340630 STAP2Q9UGK3 403 aa22.25■■□□□ 1.15
IFT27-201ENST00000340630 NPM3O75607 178 aaKnown RBP22.24■■□□□ 1.15
IFT27-201ENST00000340630 LDHCP07864 332 aa22.24■■□□□ 1.15
IFT27-201ENST00000340630 GSTO1P78417 241 aa22.24■■□□□ 1.15
IFT27-201ENST00000340630 TBC1D9Q6ZT07 1266 aa22.24■■□□□ 1.15
IFT27-201ENST00000340630 TRMT2AQ8IZ69 625 aaKnown RBP22.24■■□□□ 1.15
IFT27-201ENST00000340630 CRISPLD2Q9H0B8 497 aa22.24■■□□□ 1.15
IFT27-201ENST00000340630 HMG20BQ9P0W2 317 aa22.24■■□□□ 1.15
IFT27-201ENST00000340630 HMGCS2P54868 508 aa22.23■■□□□ 1.15
IFT27-201ENST00000340630 GORABQ5T7V8 394 aa22.23■■□□□ 1.15
IFT27-201ENST00000340630 PI16Q6UXB8 463 aa22.23■■□□□ 1.15
IFT27-201ENST00000340630 NECAB2Q7Z6G3 386 aa22.23■■□□□ 1.15
IFT27-201ENST00000340630 NSUN4Q96CB9 384 aaKnown RBP22.23■■□□□ 1.15
IFT27-201ENST00000340630 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.23■■□□□ 1.15
IFT27-201ENST00000340630 RAI14Q9P0K7 980 aa22.23■■□□□ 1.15
IFT27-201ENST00000340630 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.23■■□□□ 1.15
IFT27-201ENST00000340630 CT47B1P0C2W7 299 aaPredicted RBP22.22■■□□□ 1.15
IFT27-201ENST00000340630 GCLCP48506 637 aaPredicted RBP22.22■■□□□ 1.15
IFT27-201ENST00000340630 PABPC4Q13310 644 aaKnown RBP eCLIP22.22■■□□□ 1.15
IFT27-201ENST00000340630 SPATA5Q8NB90 893 aa22.22■■□□□ 1.15
IFT27-201ENST00000340630 DIS3LQ8TF46 1054 aaKnown RBP22.22■■□□□ 1.15
IFT27-201ENST00000340630 DOCK1Q14185 1865 aa22.22■■□□□ 1.15
IFT27-201ENST00000340630 A0A1W2PPC1 479 aa22.21■■□□□ 1.15
IFT27-201ENST00000340630 USP17L5A8MUK1 530 aa22.21■■□□□ 1.15
IFT27-201ENST00000340630 MAP4K4O95819 1239 aaPredicted RBP22.21■■□□□ 1.15
IFT27-201ENST00000340630 GNAI3P08754 354 aa22.21■■□□□ 1.15
IFT27-201ENST00000340630 CAP2P40123 477 aa22.21■■□□□ 1.15
IFT27-201ENST00000340630 RRP1BQ14684 758 aaKnown RBP22.21■■□□□ 1.15
IFT27-201ENST00000340630 ASCC2Q9H1I8 757 aaPredicted RBP22.21■■□□□ 1.15
IFT27-201ENST00000340630 PHIPQ8WWQ0 1821 aa22.2■■□□□ 1.14
IFT27-201ENST00000340630 HMGCRP04035 888 aa22.2■■□□□ 1.14
IFT27-201ENST00000340630 TEX11Q8IYF3 940 aa22.2■■□□□ 1.14
IFT27-201ENST00000340630 TBC1D2Q9BYX2 928 aa22.2■■□□□ 1.14
IFT27-201ENST00000340630 GJD2Q9UKL4 321 aa22.2■■□□□ 1.14
IFT27-201ENST00000340630 PTPRFP10586 1907 aa22.19■■□□□ 1.14
IFT27-201ENST00000340630 SOX1O00570 391 aaPredicted RBP22.19■■□□□ 1.14
IFT27-201ENST00000340630 TRIM32Q13049 653 aa22.19■■□□□ 1.14
IFT27-201ENST00000340630 LRCH3Q96II8 777 aa22.19■■□□□ 1.14
IFT27-201ENST00000340630 LAMA3Q16787 3333 aa22.19■■□□□ 1.14
IFT27-201ENST00000340630 MTX1Q13505 466 aa22.18■■□□□ 1.14
IFT27-201ENST00000340630 C7orf61Q8IZ16 206 aa22.18■■□□□ 1.14
IFT27-201ENST00000340630 SLC17A8Q8NDX2 589 aa22.18■■□□□ 1.14
IFT27-201ENST00000340630 SH3RF3Q8TEJ3 882 aaPredicted RBP22.18■■□□□ 1.14
IFT27-201ENST00000340630 AS3MTQ9HBK9 375 aa22.18■■□□□ 1.14
IFT27-201ENST00000340630 HMX1Q9NP08 348 aaPredicted RBP22.18■■□□□ 1.14
IFT27-201ENST00000340630 LRP2BPQ9P2M1 347 aa22.18■■□□□ 1.14
IFT27-201ENST00000340630 RPTORQ8N122 1335 aa22.17■■□□□ 1.14
IFT27-201ENST00000340630 RARSP54136 660 aaKnown RBP22.17■■□□□ 1.14
IFT27-201ENST00000340630 SH3D19Q5HYK7 790 aa22.17■■□□□ 1.14
IFT27-201ENST00000340630 ANKLE1Q8NAG6 615 aa22.17■■□□□ 1.14
IFT27-201ENST00000340630 NOL10Q9BSC4 688 aaKnown RBP22.17■■□□□ 1.14
IFT27-201ENST00000340630 HERC5Q9UII4 1024 aaKnown RBP22.17■■□□□ 1.14
IFT27-201ENST00000340630 DOCK3Q8IZD9 2030 aa22.16■■□□□ 1.14
IFT27-201ENST00000340630 CCER2I3L3R5 266 aa22.16■■□□□ 1.14
IFT27-201ENST00000340630 ARID4AP29374 1257 aaPredicted RBP22.16■■□□□ 1.14
IFT27-201ENST00000340630 MCAMP43121 646 aa22.16■■□□□ 1.14
IFT27-201ENST00000340630 ARHGAP45Q92619 1136 aa22.16■■□□□ 1.14
IFT27-201ENST00000340630 PI4KBQ9UBF8 816 aa22.16■■□□□ 1.14
IFT27-201ENST00000340630 ZMYND8Q9ULU4 1186 aaPredicted RBP22.16■■□□□ 1.14
IFT27-201ENST00000340630 COL2A1P02458 1487 aaPredicted RBP22.15■■□□□ 1.14
IFT27-201ENST00000340630 CYP2B6P20813 491 aa22.15■■□□□ 1.14
IFT27-201ENST00000340630 IRX3P78415 501 aaPredicted RBP22.15■■□□□ 1.14
IFT27-201ENST00000340630 G3BP1Q13283 466 aaKnown RBP eCLIP22.15■■□□□ 1.14
IFT27-201ENST00000340630 MTMR2Q13614 643 aa22.15■■□□□ 1.14
IFT27-201ENST00000340630 WDR18Q9BV38 432 aa22.15■■□□□ 1.14
IFT27-201ENST00000340630 NBPF3Q9H094 633 aa22.15■■□□□ 1.14
IFT27-201ENST00000340630 TMOD4Q9NZQ9 345 aa22.15■■□□□ 1.14
IFT27-201ENST00000340630 MORF4L1Q9UBU8 362 aa22.15■■□□□ 1.14
IFT27-201ENST00000340630 PEX10O60683 326 aa22.14■■□□□ 1.13
IFT27-201ENST00000340630 UQCRFS1P1P0C7P4 283 aa22.14■■□□□ 1.13
IFT27-201ENST00000340630 BACE1P56817 501 aa22.14■■□□□ 1.13
IFT27-201ENST00000340630 P2RX7Q99572 595 aaKnown RBP22.14■■□□□ 1.13
IFT27-201ENST00000340630 GDF15Q99988 308 aa22.14■■□□□ 1.13
IFT27-201ENST00000340630 SNRKQ9NRH2 765 aa22.14■■□□□ 1.13
IFT27-201ENST00000340630 AATFQ9NY61 560 aaKnown RBP eCLIP22.14■■□□□ 1.13
IFT27-201ENST00000340630 COL6A3P12111 3177 aa22.13■■□□□ 1.13
IFT27-201ENST00000340630 BAG3O95817 575 aa22.13■■□□□ 1.13
IFT27-201ENST00000340630 GNAI2P04899 355 aa22.13■■□□□ 1.13
IFT27-201ENST00000340630 NAA16Q6N069 864 aaPredicted RBP22.13■■□□□ 1.13
IFT27-201ENST00000340630 TGFBRAP1Q8WUH2 860 aa22.13■■□□□ 1.13
IFT27-201ENST00000340630 TRIB2Q92519 343 aa22.13■■□□□ 1.13
IFT27-201ENST00000340630 DHX36Q9H2U1 1008 aaKnown RBP22.13■■□□□ 1.13
IFT27-201ENST00000340630 C11orf49Q9H6J7 331 aa22.13■■□□□ 1.13
IFT27-201ENST00000340630 A0A0C4DFX4 3053 aa22.12■■□□□ 1.13
IFT27-201ENST00000340630 PNMA6EA0A0J9YXQ4 647 aa22.12■■□□□ 1.13
IFT27-201ENST00000340630 DLL1O00548 723 aa22.12■■□□□ 1.13
IFT27-201ENST00000340630 ASNSP08243 561 aa22.12■■□□□ 1.13
IFT27-201ENST00000340630 SYN1P17600 705 aa22.12■■□□□ 1.13
IFT27-201ENST00000340630 BMP8BP34820 402 aa22.12■■□□□ 1.13
IFT27-201ENST00000340630 MNX1P50219 401 aaPredicted RBP22.12■■□□□ 1.13
IFT27-201ENST00000340630 JAG1P78504 1218 aa22.12■■□□□ 1.13
IFT27-201ENST00000340630 MAPKAPK5Q8IW41 473 aa22.12■■□□□ 1.13
IFT27-201ENST00000340630 GPRC5AQ8NFJ5 357 aa22.12■■□□□ 1.13
IFT27-201ENST00000340630 HOXA7P31268 230 aaPredicted RBP22.11■■□□□ 1.13
IFT27-201ENST00000340630 HERVK_113P62684 666 aa22.11■■□□□ 1.13
IFT27-201ENST00000340630 CRACR2BQ8N4Y2 399 aaPredicted RBP22.11■■□□□ 1.13
IFT27-201ENST00000340630 YTHDC1Q96MU7 727 aaKnown RBP22.11■■□□□ 1.13
IFT27-201ENST00000340630 NUDT12Q9BQG2 462 aa22.11■■□□□ 1.13
IFT27-201ENST00000340630 TRIM34Q9BYJ4 488 aa22.11■■□□□ 1.13
IFT27-201ENST00000340630 TXNRD2Q9NNW7 524 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms