RNA–Protein interactions for RNA: ENST00000338962.8

LRP1-202, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-202ENST00000338962 MICU3Q86XE3 530 aa12.93□□□□□ -0.34
LRP1-202ENST00000338962 NIM1KQ8IY84 436 aa12.93□□□□□ -0.34
LRP1-202ENST00000338962 NKX2-3Q8TAU0 364 aa12.93□□□□□ -0.34
LRP1-202ENST00000338962 STAG1Q8WVM7 1258 aa12.93□□□□□ -0.34
LRP1-202ENST00000338962 INCENPQ9NQS7 918 aa12.93□□□□□ -0.34
LRP1-202ENST00000338962 ZSWIM5Q9P217 1185 aa12.93□□□□□ -0.34
LRP1-202ENST00000338962 ORC3Q9UBD5 711 aaPredicted RBP12.93□□□□□ -0.34
LRP1-202ENST00000338962 YDJCA8MPS7 323 aa12.92□□□□□ -0.34
LRP1-202ENST00000338962 IFIT3O14879 490 aaKnown RBP12.92□□□□□ -0.34
LRP1-202ENST00000338962 ZBTB43O43298 467 aa12.92□□□□□ -0.34
LRP1-202ENST00000338962 ECE2O60344 883 aa12.92□□□□□ -0.34
LRP1-202ENST00000338962 RRP12Q5JTH9 1297 aaKnown RBP12.92□□□□□ -0.34
LRP1-202ENST00000338962 C9orf131Q5VYM1 1079 aa12.92□□□□□ -0.34
LRP1-202ENST00000338962 SGMS1Q86VZ5 419 aa12.92□□□□□ -0.34
LRP1-202ENST00000338962 IGDCC4Q8TDY8 1250 aa12.92□□□□□ -0.34
LRP1-202ENST00000338962 TRIM44Q96DX7 344 aaPredicted RBP12.92□□□□□ -0.34
LRP1-202ENST00000338962 C8orf76Q96K31 380 aa12.92□□□□□ -0.34
LRP1-202ENST00000338962 RIOK1Q9BRS2 568 aaKnown RBP12.92□□□□□ -0.34
LRP1-202ENST00000338962 DBNDD1Q9H9R9 158 aa12.92□□□□□ -0.34
LRP1-202ENST00000338962 CLCN1P35523 988 aa12.91□□□□□ -0.34
LRP1-202ENST00000338962 LIFRP42702 1097 aa12.91□□□□□ -0.34
LRP1-202ENST00000338962 PPARAQ07869 468 aa12.91□□□□□ -0.34
LRP1-202ENST00000338962 CHAF1AQ13111 956 aaPredicted RBP12.91□□□□□ -0.34
LRP1-202ENST00000338962 RNF214Q8ND24 703 aa12.91□□□□□ -0.34
LRP1-202ENST00000338962 LY9Q9HBG7 655 aa12.91□□□□□ -0.34
LRP1-202ENST00000338962 CHD4Q14839 1912 aa12.91□□□□□ -0.34
LRP1-202ENST00000338962 COL4A5P29400 1685 aa12.91□□□□□ -0.34
LRP1-202ENST00000338962 ERICH2A1L162 156 aa12.91□□□□□ -0.34
LRP1-202ENST00000338962 CCDC69A6NI79 296 aa12.91□□□□□ -0.34
LRP1-202ENST00000338962 MINDY4BA8MYZ0 360 aa12.91□□□□□ -0.34
LRP1-202ENST00000338962 G3V3G9 751 aa12.91□□□□□ -0.34
LRP1-202ENST00000338962 DCAF8Q5TAQ9 597 aa12.91□□□□□ -0.34
LRP1-202ENST00000338962 ATL3Q6DD88 541 aa12.91□□□□□ -0.34
LRP1-202ENST00000338962 NSUN4Q96CB9 384 aaKnown RBP12.91□□□□□ -0.34
LRP1-202ENST00000338962 ZNF396Q96N95 335 aaPredicted RBP12.91□□□□□ -0.34
LRP1-202ENST00000338962 RNF181Q9P0P0 153 aa12.91□□□□□ -0.34
LRP1-202ENST00000338962 SLC12A7Q9Y666 1083 aa12.91□□□□□ -0.34
LRP1-202ENST00000338962 ZC3H4Q9UPT8 1303 aaKnown RBP12.91□□□□□ -0.34
LRP1-202ENST00000338962 RXRAP19793 462 aa12.9□□□□□ -0.34
LRP1-202ENST00000338962 MECOMQ03112 1051 aa12.9□□□□□ -0.34
LRP1-202ENST00000338962 CEBPZQ03701 1054 aaKnown RBP12.9□□□□□ -0.34
LRP1-202ENST00000338962 SYNE3Q6ZMZ3 975 aa12.9□□□□□ -0.34
LRP1-202ENST00000338962 FBXO18Q8NFZ0 1043 aa12.9□□□□□ -0.34
LRP1-202ENST00000338962 BICD2Q8TD16 824 aa12.9□□□□□ -0.34
LRP1-202ENST00000338962 RRAGDQ9NQL2 400 aaPredicted RBP12.9□□□□□ -0.34
LRP1-202ENST00000338962 MYH13Q9UKX3 1938 aa12.9□□□□□ -0.34
LRP1-202ENST00000338962 FAM205AQ6ZU69 1335 aa12.9□□□□□ -0.34
LRP1-202ENST00000338962 GOLGA8AA7E2F4 631 aa12.9□□□□□ -0.34
LRP1-202ENST00000338962 ADD1P35611 737 aaKnown RBP12.9□□□□□ -0.34
LRP1-202ENST00000338962 DYNLL1P63167 89 aaKnown RBP12.9□□□□□ -0.34
LRP1-202ENST00000338962 STRIP1Q5VSL9 837 aa12.9□□□□□ -0.34
LRP1-202ENST00000338962 STK11IPQ8N1F8 1099 aa12.9□□□□□ -0.34
LRP1-202ENST00000338962 ZNF384Q8TF68 577 aa12.9□□□□□ -0.34
LRP1-202ENST00000338962 PPP1R9BQ96SB3 815 aa12.9□□□□□ -0.34
LRP1-202ENST00000338962 SENP2Q9HC62 589 aa12.9□□□□□ -0.34
LRP1-202ENST00000338962 KCNQ5Q9NR82 932 aa12.9□□□□□ -0.34
LRP1-202ENST00000338962 LIG1P18858 919 aa12.89□□□□□ -0.35
LRP1-202ENST00000338962 PRDX5P30044 214 aa12.89□□□□□ -0.35
LRP1-202ENST00000338962 CXCL9Q07325 125 aa12.89□□□□□ -0.35
LRP1-202ENST00000338962 TMED8Q6PL24 325 aaPredicted RBP12.89□□□□□ -0.35
LRP1-202ENST00000338962 CCDC144CPQ8IYA2 1237 aa12.89□□□□□ -0.35
LRP1-202ENST00000338962 UBAC1Q9BSL1 405 aa12.89□□□□□ -0.35
LRP1-202ENST00000338962 MTA3Q9BTC8 594 aa12.89□□□□□ -0.35
LRP1-202ENST00000338962 NUP62CLQ9H1M0 184 aa12.89□□□□□ -0.35
LRP1-202ENST00000338962 ANAPC4Q9UJX5 808 aa12.89□□□□□ -0.35
LRP1-202ENST00000338962 TACC3Q9Y6A5 838 aa12.89□□□□□ -0.35
LRP1-202ENST00000338962 USP17L3A6NCW0 530 aa12.88□□□□□ -0.35
LRP1-202ENST00000338962 USP17L4A6NCW7 530 aa12.88□□□□□ -0.35
LRP1-202ENST00000338962 VIL1P09327 827 aaKnown RBP12.88□□□□□ -0.35
LRP1-202ENST00000338962 FKBP1AP62942 108 aaKnown RBP12.88□□□□□ -0.35
LRP1-202ENST00000338962 WTAPQ15007 396 aa12.88□□□□□ -0.35
LRP1-202ENST00000338962 SPTY2D1Q68D10 685 aaPredicted RBP12.88□□□□□ -0.35
LRP1-202ENST00000338962 GIMAP6Q6P9H5 292 aa12.88□□□□□ -0.35
LRP1-202ENST00000338962 USP17L1Q7RTZ2 530 aa12.88□□□□□ -0.35
LRP1-202ENST00000338962 ESR2Q92731 530 aa12.88□□□□□ -0.35
LRP1-202ENST00000338962 DACT1Q9NYF0 836 aa12.88□□□□□ -0.35
LRP1-202ENST00000338962 CDC27P30260 824 aa12.88□□□□□ -0.35
LRP1-202ENST00000338962 EIF6P56537 245 aaKnown RBP12.88□□□□□ -0.35
LRP1-202ENST00000338962 DACT2Q5SW24 774 aa12.88□□□□□ -0.35
LRP1-202ENST00000338962 OTUD7BQ6GQQ9 843 aa12.88□□□□□ -0.35
LRP1-202ENST00000338962 DZIP1Q86YF9 867 aaKnown RBP12.88□□□□□ -0.35
LRP1-202ENST00000338962 TMTC2Q8N394 836 aa12.88□□□□□ -0.35
LRP1-202ENST00000338962 PGBD1Q96JS3 809 aa12.88□□□□□ -0.35
LRP1-202ENST00000338962 USP28Q96RU2 1077 aa12.88□□□□□ -0.35
LRP1-202ENST00000338962 ZKSCAN3Q9BRR0 538 aa12.88□□□□□ -0.35
LRP1-202ENST00000338962 MYL10Q9BUA6 226 aa12.88□□□□□ -0.35
LRP1-202ENST00000338962 CRNKL1Q9BZJ0 848 aaKnown RBP12.88□□□□□ -0.35
LRP1-202ENST00000338962 DDX19AQ9NUU7 478 aaKnown RBP12.88□□□□□ -0.35
LRP1-202ENST00000338962 AATFQ9NY61 560 aaKnown RBP eCLIP12.88□□□□□ -0.35
LRP1-202ENST00000338962 JAG2Q9Y219 1238 aa12.88□□□□□ -0.35
LRP1-202ENST00000338962 RRP9O43818 475 aaKnown RBP12.87□□□□□ -0.35
LRP1-202ENST00000338962 GTF2IP78347 998 aa12.87□□□□□ -0.35
LRP1-202ENST00000338962 TNIP1Q15025 636 aa12.87□□□□□ -0.35
LRP1-202ENST00000338962 CIAPIN1Q6FI81 312 aa12.87□□□□□ -0.35
LRP1-202ENST00000338962 BRAPQ7Z569 592 aa12.87□□□□□ -0.35
LRP1-202ENST00000338962 RGS22Q8NE09 1264 aa12.87□□□□□ -0.35
LRP1-202ENST00000338962 WDR66Q8TBY9 1149 aa12.87□□□□□ -0.35
LRP1-202ENST00000338962 PHKBQ93100 1093 aa12.87□□□□□ -0.35
LRP1-202ENST00000338962 FTOQ9C0B1 505 aaKnown RBP eCLIP12.87□□□□□ -0.35
LRP1-202ENST00000338962 RCOR1Q9UKL0 485 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms