RNA–Protein interactions for RNA: ENST00000335972.10

UBA1-201, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA1, Length 3,559 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-201ENST00000335972 PCDHA5Q9Y5H7 936 aa17.12■□□□□ 0.33
UBA1-201ENST00000335972 ATRNO75882 1429 aa17.11■□□□□ 0.33
UBA1-201ENST00000335972 MAGEB6P1A0A0J9YX57 407 aa17.11■□□□□ 0.33
UBA1-201ENST00000335972 PRR29P0C7W0 189 aa17.11■□□□□ 0.33
UBA1-201ENST00000335972 TRMT44Q8IYL2 757 aaKnown RBP17.11■□□□□ 0.33
UBA1-201ENST00000335972 MTMR7Q9Y216 660 aa17.11■□□□□ 0.33
UBA1-201ENST00000335972 TMEM232C9JQI7 657 aa17.11■□□□□ 0.33
UBA1-201ENST00000335972 FMNL1O95466 1100 aaPredicted RBP17.11■□□□□ 0.33
UBA1-201ENST00000335972 KRT23Q9C075 422 aa17.11■□□□□ 0.33
UBA1-201ENST00000335972 SRP68Q9UHB9 627 aaKnown RBP17.11■□□□□ 0.33
UBA1-201ENST00000335972 TNKSO95271 1327 aa17.11■□□□□ 0.33
UBA1-201ENST00000335972 FANCCQ00597 558 aa17.1■□□□□ 0.33
UBA1-201ENST00000335972 ALX1Q15699 326 aa17.1■□□□□ 0.33
UBA1-201ENST00000335972 TRIM22Q8IYM9 498 aa17.1■□□□□ 0.33
UBA1-201ENST00000335972 SHISA4Q96DD7 197 aa17.1■□□□□ 0.33
UBA1-201ENST00000335972 C4AP0C0L4 1744 aa17.1■□□□□ 0.33
UBA1-201ENST00000335972 C4BP0C0L5 1744 aa17.1■□□□□ 0.33
UBA1-201ENST00000335972 POLR2DO15514 142 aaKnown RBP17.1■□□□□ 0.33
UBA1-201ENST00000335972 SERPINC1P01008 464 aa17.1■□□□□ 0.33
UBA1-201ENST00000335972 LIFRP42702 1097 aa17.1■□□□□ 0.33
UBA1-201ENST00000335972 SART3Q15020 963 aaKnown RBP17.1■□□□□ 0.33
UBA1-201ENST00000335972 FAM98CQ17RN3 349 aaKnown RBP17.1■□□□□ 0.33
UBA1-201ENST00000335972 PLEKHA8P1O95397 391 aa17.1■□□□□ 0.33
UBA1-201ENST00000335972 U2AF2P26368 475 aaKnown RBP eCLIP17.1■□□□□ 0.338e-15■■□□□ 13.3
UBA1-201ENST00000335972 GTF2F1P35269 517 aaKnown RBP eCLIP17.1■□□□□ 0.332e-6■□□□□ 9.8
UBA1-201ENST00000335972 SAFBQ15424 915 aaKnown RBP eCLIP17.1■□□□□ 0.33
UBA1-201ENST00000335972 PTPN14Q15678 1187 aa17.1■□□□□ 0.33
UBA1-201ENST00000335972 EARS2Q5JPH6 523 aaKnown RBP17.1■□□□□ 0.33
UBA1-201ENST00000335972 FANCBQ8NB91 859 aa17.1■□□□□ 0.33
UBA1-201ENST00000335972 CCDC112Q8NEF3 446 aa17.1■□□□□ 0.33
UBA1-201ENST00000335972 FANCLQ9NW38 375 aa17.1■□□□□ 0.33
UBA1-201ENST00000335972 COBLO75128 1261 aa17.09■□□□□ 0.33
UBA1-201ENST00000335972 FAM47AQ5JRC9 791 aa17.09■□□□□ 0.33
UBA1-201ENST00000335972 ANKRD18AQ8IVF6 992 aa17.09■□□□□ 0.33
UBA1-201ENST00000335972 HSD3B7Q9H2F3 369 aa17.09■□□□□ 0.33
UBA1-201ENST00000335972 SERTAD1Q9UHV2 236 aa17.09■□□□□ 0.33
UBA1-201ENST00000335972 SPATA31A1Q5TZJ5 1347 aa17.09■□□□□ 0.33
UBA1-201ENST00000335972 MMP1P03956 469 aa17.09■□□□□ 0.33
UBA1-201ENST00000335972 IFNAR1P17181 557 aa17.09■□□□□ 0.33
UBA1-201ENST00000335972 BMP6P22004 513 aa17.09■□□□□ 0.33
UBA1-201ENST00000335972 CFAP100Q494V2 611 aa17.09■□□□□ 0.33
UBA1-201ENST00000335972 LINC00116Q8NCU8 138 aa17.09■□□□□ 0.33
UBA1-201ENST00000335972 CNNM2Q9H8M5 875 aa17.09■□□□□ 0.33
UBA1-201ENST00000335972 MYH14Q7Z406 1995 aaKnown RBP17.09■□□□□ 0.33
UBA1-201ENST00000335972 WNT7AO00755 349 aa17.09■□□□□ 0.33
UBA1-201ENST00000335972 RESP18Q5W5W9 173 aa17.09■□□□□ 0.33
UBA1-201ENST00000335972 CRACR2BQ8N4Y2 399 aaPredicted RBP17.09■□□□□ 0.33
UBA1-201ENST00000335972 JMYQ8N9B5 988 aa17.09■□□□□ 0.33
UBA1-201ENST00000335972 ZNF384Q8TF68 577 aa17.09■□□□□ 0.33
UBA1-201ENST00000335972 STAG1Q8WVM7 1258 aa17.09■□□□□ 0.33
UBA1-201ENST00000335972 HPSEQ9Y251 543 aa17.09■□□□□ 0.33
UBA1-201ENST00000335972 CYP2D6P10635 497 aa17.08■□□□□ 0.33
UBA1-201ENST00000335972 PDCL2Q8N4E4 241 aa17.08■□□□□ 0.33
UBA1-201ENST00000335972 KRI1Q8N9T8 703 aaKnown RBP17.08■□□□□ 0.33
UBA1-201ENST00000335972 STAMQ92783 540 aa17.08■□□□□ 0.33
UBA1-201ENST00000335972 TMX1Q9H3N1 280 aa17.08■□□□□ 0.33
UBA1-201ENST00000335972 V9GY48 417 aaPredicted RBP17.08■□□□□ 0.33
UBA1-201ENST00000335972 AATFQ9NY61 560 aaKnown RBP eCLIP17.08■□□□□ 0.32
UBA1-201ENST00000335972 PARP10Q53GL7 1025 aa17.08■□□□□ 0.32
UBA1-201ENST00000335972 KRBA2Q6ZNG9 492 aa17.08■□□□□ 0.32
UBA1-201ENST00000335972 CCAR2Q8N163 923 aaKnown RBP17.08■□□□□ 0.32
UBA1-201ENST00000335972 MAP7D2Q96T17 732 aa17.08■□□□□ 0.32
UBA1-201ENST00000335972 DNAJC5Q9H3Z4 198 aa17.08■□□□□ 0.32
UBA1-201ENST00000335972 DOT1LQ8TEK3 1739 aa17.07■□□□□ 0.32
UBA1-201ENST00000335972 NCBP1Q09161 790 aaKnown RBP17.07■□□□□ 0.32
UBA1-201ENST00000335972 TBC1D9BQ66K14 1250 aa17.07■□□□□ 0.32
UBA1-201ENST00000335972 PPP6R2O75170 966 aa17.07■□□□□ 0.32
UBA1-201ENST00000335972 UBASH3AP57075 661 aa17.07■□□□□ 0.32
UBA1-201ENST00000335972 ENAHQ8N8S7 591 aaPredicted RBP17.07■□□□□ 0.32
UBA1-201ENST00000335972 CDC5LQ99459 802 aaKnown RBP17.07■□□□□ 0.32
UBA1-201ENST00000335972 ZMYND15Q9H091 742 aa17.07■□□□□ 0.32
UBA1-201ENST00000335972 MINPP1Q9UNW1 487 aa17.07■□□□□ 0.32
UBA1-201ENST00000335972 USP17L12C9JPN9 530 aa17.07■□□□□ 0.32
UBA1-201ENST00000335972 USP17L21D6R901 530 aa17.07■□□□□ 0.32
UBA1-201ENST00000335972 VEGFAP15692 232 aaPredicted RBP17.07■□□□□ 0.32
UBA1-201ENST00000335972 SFPQP23246 707 aaKnown RBP eCLIP17.07■□□□□ 0.32
UBA1-201ENST00000335972 AFMP43652 599 aa17.07■□□□□ 0.32
UBA1-201ENST00000335972 RBM6P78332 1123 aaKnown RBP17.07■□□□□ 0.32
UBA1-201ENST00000335972 FAM177A1Q8N128 213 aaPredicted RBP17.07■□□□□ 0.32
UBA1-201ENST00000335972 COL1A1P02452 1464 aaPredicted RBP17.06■□□□□ 0.32
UBA1-201ENST00000335972 SMTNL1A8MU46 457 aa17.06■□□□□ 0.32
UBA1-201ENST00000335972 CUTAO60888 179 aa17.06■□□□□ 0.32
UBA1-201ENST00000335972 TPM4P67936 248 aa17.06■□□□□ 0.32
UBA1-201ENST00000335972 E4F1Q66K89 784 aaPredicted RBP17.06■□□□□ 0.32
UBA1-201ENST00000335972 FAM84BQ96KN1 310 aaPredicted RBP17.06■□□□□ 0.32
UBA1-201ENST00000335972 ANKRD36CQ5JPF3 1778 aa17.06■□□□□ 0.32
UBA1-201ENST00000335972 AKAP17AQ02040 695 aaKnown RBP17.05■□□□□ 0.32
UBA1-201ENST00000335972 KLHL10Q6JEL2 608 aa17.05■□□□□ 0.32
UBA1-201ENST00000335972 EPSTI1Q96J88 318 aa17.05■□□□□ 0.32
UBA1-201ENST00000335972 CSRNP2Q9H175 543 aa17.05■□□□□ 0.32
UBA1-201ENST00000335972 ADAMTS3O15072 1205 aa17.05■□□□□ 0.32
UBA1-201ENST00000335972 FMR1Q06787 632 aaKnown RBP eCLIP17.05■□□□□ 0.321e-6■■■□□ 14.6
UBA1-201ENST00000335972 OLFM4Q6UX06 510 aa17.05■□□□□ 0.32
UBA1-201ENST00000335972 TXNRD3Q86VQ6 643 aa17.05■□□□□ 0.32
UBA1-201ENST00000335972 DHX58Q96C10 678 aa17.05■□□□□ 0.32
UBA1-201ENST00000335972 GPR101Q96P66 508 aaPredicted RBP17.05■□□□□ 0.32
UBA1-201ENST00000335972 ZNF215Q9UL58 517 aaPredicted RBP17.05■□□□□ 0.32
UBA1-201ENST00000335972 PRDX5P30044 214 aa17.05■□□□□ 0.32
UBA1-201ENST00000335972 ZNF174Q15697 407 aa17.05■□□□□ 0.32
UBA1-201ENST00000335972 RIOK1Q9BRS2 568 aaKnown RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms