RNA–Protein interactions for RNA: ENST00000307548.2

SHANK2-AS3-201, SHANK2 antisense RNA 3, humanhuman

TSL 1 (best) BASIC

Gene SHANK2-AS3, Length 1,683 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3-201ENST00000307548 FGD1P98174 961 aa15.11■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 C12orf60Q5U649 245 aa15.11■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 TGFBRAP1Q8WUH2 860 aa15.11■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 L3MBTL3Q96JM7 780 aaPredicted RBP15.11■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 LARP6Q9BRS8 491 aaKnown RBP15.11■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 IDI2Q9BXS1 227 aa15.11■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 TDRD3Q9H7E2 651 aaKnown RBP15.11■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 B4E1Z4 1266 aa15.1■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 ORC4O43929 436 aa15.1■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 PFKFB2O60825 505 aa15.1■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 LIFRP42702 1097 aa15.1■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 CYB5R4Q7L1T6 521 aa15.1■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 IGDCC4Q8TDY8 1250 aa15.1■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 DDX4Q9NQI0 724 aaKnown RBP15.1■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 ZSWIM5Q9P217 1185 aa15.1■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.1■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 FLT1P17948 1338 aa15.1■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 BAZ2AQ9UIF9 1905 aaKnown RBP15.09■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 WNT10BO00744 389 aa15.09■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 PDIA4P13667 645 aaKnown RBP15.09■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 ST3GAL1Q11201 340 aa15.09■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 NFIAQ12857 509 aa15.09■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 RAB3GAP1Q15042 981 aa15.09■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 SPDYE2Q495Y8 402 aa15.09■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 GTF3C6Q969F1 213 aa15.09■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 LRRC2Q9BYS8 371 aa15.09■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 MCM9Q9NXL9 1143 aa15.09■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 ANGEL1Q9UNK9 670 aaKnown RBP15.09■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 NAV1Q8NEY1 1877 aa15.09■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 ROBO3Q96MS0 1386 aa15.09■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 GLTPD2A6NH11 291 aa15.09■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 SH2B2O14492 632 aaPredicted RBP15.09■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 PDIA3P30101 505 aaKnown RBP15.09■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 EPS15P42566 896 aa15.09■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 NBPF9Q3BBW0 867 aa15.09■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 CHST3Q7LGC8 479 aa15.09■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 SAMD7Q7Z3H4 446 aa15.09■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 SGMS1Q86VZ5 419 aa15.09■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 MAPKAPK5Q8IW41 473 aa15.09■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 AMOTL1Q8IY63 956 aa15.09■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 ESR2Q92731 530 aa15.09■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 LLPHQ9BRT6 129 aaKnown RBP15.09■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 INCENPQ9NQS7 918 aa15.09■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 ZNF70Q9UC06 446 aaPredicted RBP15.09■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 FAM198AQ9UFP1 575 aa15.09■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 H7C1D1 291 aa15.08■□□□□ 0
SHANK2-AS3-201ENST00000307548 SMIM22K7EJ46 135 aa15.08■□□□□ 0
SHANK2-AS3-201ENST00000307548 KDM4AO75164 1064 aa15.08■□□□□ 0
SHANK2-AS3-201ENST00000307548 CACNB3P54284 484 aa15.08■□□□□ 0
SHANK2-AS3-201ENST00000307548 APOBRQ0VD83 1088 aa15.08■□□□□ 0
SHANK2-AS3-201ENST00000307548 TBC1D10BQ4KMP7 808 aaPredicted RBP15.08■□□□□ 0
SHANK2-AS3-201ENST00000307548 FKBP1CQ5VVH2 108 aa15.08■□□□□ 0
SHANK2-AS3-201ENST00000307548 DPY19L2Q6NUT2 758 aa15.08■□□□□ 0
SHANK2-AS3-201ENST00000307548 CCDC83Q8IWF9 413 aa15.08■□□□□ 0
SHANK2-AS3-201ENST00000307548 TMTC2Q8N394 836 aa15.08■□□□□ 0
SHANK2-AS3-201ENST00000307548 NKX2-3Q8TAU0 364 aa15.08■□□□□ 0
SHANK2-AS3-201ENST00000307548 TRPM4Q8TD43 1214 aa15.08■□□□□ 0
SHANK2-AS3-201ENST00000307548 CYP2D7A0A087X1C5 515 aa15.07■□□□□ 0
SHANK2-AS3-201ENST00000307548 DCAF8L1A6NGE4 600 aa15.07■□□□□ 0
SHANK2-AS3-201ENST00000307548 CYP2D6P10635 497 aa15.07■□□□□ 0
SHANK2-AS3-201ENST00000307548 EVX2Q03828 476 aa15.07■□□□□ 0
SHANK2-AS3-201ENST00000307548 PDE4BQ07343 736 aa15.07■□□□□ 0
SHANK2-AS3-201ENST00000307548 KIF4BQ2VIQ3 1234 aa15.07■□□□□ 0
SHANK2-AS3-201ENST00000307548 NECAB1Q8N987 351 aa15.07■□□□□ 0
SHANK2-AS3-201ENST00000307548 OSBPL5Q9H0X9 879 aaPredicted RBP15.07■□□□□ 0
SHANK2-AS3-201ENST00000307548 SMC3Q9UQE7 1217 aa15.07■□□□□ 0
SHANK2-AS3-201ENST00000307548 LAMB1P07942 1786 aa15.07■□□□□ 0
SHANK2-AS3-201ENST00000307548 COL2A1P02458 1487 aaPredicted RBP15.07■□□□□ 0
SHANK2-AS3-201ENST00000307548 CLRN2A0PK11 232 aa15.06■□□□□ 0
SHANK2-AS3-201ENST00000307548 HIRAP54198 1017 aaPredicted RBP15.06■□□□□ 0
SHANK2-AS3-201ENST00000307548 SART3Q15020 963 aaKnown RBP15.06■□□□□ 0
SHANK2-AS3-201ENST00000307548 CLEC17AQ6ZS10 378 aa15.06■□□□□ 0
SHANK2-AS3-201ENST00000307548 ZFPM1Q8IX07 1006 aa15.06■□□□□ 0
SHANK2-AS3-201ENST00000307548 ZNF784Q8NCA9 323 aaPredicted RBP15.06■□□□□ 0
SHANK2-AS3-201ENST00000307548 TAOK2Q9UL54 1235 aa15.06■□□□□ 0
SHANK2-AS3-201ENST00000307548 CNTNAP1P78357 1384 aa15.06■□□□□ 0
SHANK2-AS3-201ENST00000307548 WDR90Q96KV7 1748 aa15.06■□□□□ 0
SHANK2-AS3-201ENST00000307548 ASTN2O75129 1339 aaPredicted RBP15.06■□□□□ 0
SHANK2-AS3-201ENST00000307548 ENTPD3O75355 529 aa15.06■□□□□ 0
SHANK2-AS3-201ENST00000307548 RCAN1P53805 252 aa15.06■□□□□ 0
SHANK2-AS3-201ENST00000307548 SCRN1Q12765 414 aa15.06■□□□□ 0
SHANK2-AS3-201ENST00000307548 PICALMQ13492 652 aa15.06■□□□□ 0
SHANK2-AS3-201ENST00000307548 RBM26Q5T8P6 1007 aaKnown RBP15.06■□□□□ 0
SHANK2-AS3-201ENST00000307548 SH3BP5LQ7L8J4 393 aa15.06■□□□□ 0
SHANK2-AS3-201ENST00000307548 LY9Q9HBG7 655 aa15.06■□□□□ 0
SHANK2-AS3-201ENST00000307548 ZNF287Q9HBT7 754 aa15.06■□□□□ 0
SHANK2-AS3-201ENST00000307548 GPHNQ9NQX3 736 aaPredicted RBP15.06■□□□□ 0
SHANK2-AS3-201ENST00000307548 ADARB2Q9NS39 739 aaKnown RBP15.06■□□□□ 0
SHANK2-AS3-201ENST00000307548 SAP30BPQ9UHR5 308 aaKnown RBP15.06■□□□□ 0
SHANK2-AS3-201ENST00000307548 BRPF3Q9ULD4 1205 aa15.06■□□□□ 0
SHANK2-AS3-201ENST00000307548 ATRNL1Q5VV63 1379 aa15.06■□□□□ 0
SHANK2-AS3-201ENST00000307548 MYH1P12882 1939 aa15.05■□□□□ -0
SHANK2-AS3-201ENST00000307548 POTECB2RU33 542 aa15.05■□□□□ -0
SHANK2-AS3-201ENST00000307548 IFIT3O14879 490 aaKnown RBP15.05■□□□□ -0
SHANK2-AS3-201ENST00000307548 POLR3DP05423 398 aaPredicted RBP15.05■□□□□ -0
SHANK2-AS3-201ENST00000307548 TMEM67Q5HYA8 995 aa15.05■□□□□ -0
SHANK2-AS3-201ENST00000307548 RRP12Q5JTH9 1297 aaKnown RBP15.05■□□□□ -0
SHANK2-AS3-201ENST00000307548 SMARCC2Q8TAQ2 1214 aa15.05■□□□□ -0
SHANK2-AS3-201ENST00000307548 TOMM22Q9NS69 142 aa15.05■□□□□ -0
SHANK2-AS3-201ENST00000307548 KLF18A0A0U1RQI7 1052 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms