RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 A0A0D9SFI3 127 aa10.58□□□□□ -0.72
PTPRE-202ENST00000306042 DEXIO95424 95 aa10.58□□□□□ -0.72
PTPRE-202ENST00000306042 KRT79Q5XKE5 535 aa10.58□□□□□ -0.72
PTPRE-202ENST00000306042 POTEAQ6S8J7 498 aa10.58□□□□□ -0.72
PTPRE-202ENST00000306042 NCAPG2Q86XI2 1143 aa10.58□□□□□ -0.72
PTPRE-202ENST00000306042 FSIP1Q8NA03 581 aa10.58□□□□□ -0.72
PTPRE-202ENST00000306042 HSPD1P10809 573 aaKnown RBP10.58□□□□□ -0.72
PTPRE-202ENST00000306042 ALAS1P13196 640 aa10.58□□□□□ -0.72
PTPRE-202ENST00000306042 KLHL10Q6JEL2 608 aa10.58□□□□□ -0.72
PTPRE-202ENST00000306042 USP26Q9BXU7 913 aa10.58□□□□□ -0.72
PTPRE-202ENST00000306042 TBC1D2Q9BYX2 928 aa10.58□□□□□ -0.72
PTPRE-202ENST00000306042 TDRD3Q9H7E2 651 aaKnown RBP10.58□□□□□ -0.72
PTPRE-202ENST00000306042 CPA1P15085 419 aa10.57□□□□□ -0.72
PTPRE-202ENST00000306042 TGFB2P61812 414 aa10.57□□□□□ -0.72
PTPRE-202ENST00000306042 SLFN13Q68D06 897 aa10.57□□□□□ -0.72
PTPRE-202ENST00000306042 ANKRD35Q8N283 1001 aa10.57□□□□□ -0.72
PTPRE-202ENST00000306042 CCDC150Q8NCX0 1101 aa10.57□□□□□ -0.72
PTPRE-202ENST00000306042 ARHGEF28Q8N1W1 1705 aaKnown RBP10.57□□□□□ -0.72
PTPRE-202ENST00000306042 GDF11O95390 407 aa10.57□□□□□ -0.72
PTPRE-202ENST00000306042 PCP11498 1178 aaKnown RBP10.57□□□□□ -0.72
PTPRE-202ENST00000306042 TBC1D16Q8TBP0 767 aa10.57□□□□□ -0.72
PTPRE-202ENST00000306042 ANTXR1Q9H6X2 564 aa10.57□□□□□ -0.72
PTPRE-202ENST00000306042 E7EWF7 191 aa10.57□□□□□ -0.72
PTPRE-202ENST00000306042 FOXP4Q8IVH2 680 aaPredicted RBP10.57□□□□□ -0.72
PTPRE-202ENST00000306042 MYL10Q9BUA6 226 aa10.57□□□□□ -0.72
PTPRE-202ENST00000306042 HACL1Q9UJ83 578 aa10.57□□□□□ -0.72
PTPRE-202ENST00000306042 CEMIPQ8WUJ3 1361 aa10.57□□□□□ -0.72
PTPRE-202ENST00000306042 NTSR2O95665 410 aa10.57□□□□□ -0.72
PTPRE-202ENST00000306042 FGAP02671 866 aa10.57□□□□□ -0.72
PTPRE-202ENST00000306042 TOP1P11387 765 aaKnown RBP10.57□□□□□ -0.72
PTPRE-202ENST00000306042 CNGA1P29973 690 aa10.57□□□□□ -0.72
PTPRE-202ENST00000306042 ADD2P35612 726 aa10.57□□□□□ -0.72
PTPRE-202ENST00000306042 KIF4BQ2VIQ3 1234 aa10.57□□□□□ -0.72
PTPRE-202ENST00000306042 LETM2Q2VYF4 491 aa10.57□□□□□ -0.72
PTPRE-202ENST00000306042 ZSCAN10Q96SZ4 725 aaPredicted RBP10.57□□□□□ -0.72
PTPRE-202ENST00000306042 PRKAG2Q9UGJ0 569 aa10.57□□□□□ -0.72
PTPRE-202ENST00000306042 FGFR1OPO95684 399 aaKnown RBP10.56□□□□□ -0.72
PTPRE-202ENST00000306042 ADCY7P51828 1080 aa10.56□□□□□ -0.72
PTPRE-202ENST00000306042 PNMA1Q8ND90 353 aa10.56□□□□□ -0.72
PTPRE-202ENST00000306042 NAP1L5Q96NT1 182 aaPredicted RBP10.56□□□□□ -0.72
PTPRE-202ENST00000306042 TCHPQ9BT92 498 aa10.56□□□□□ -0.72
PTPRE-202ENST00000306042 KANSL2Q9H9L4 492 aa10.56□□□□□ -0.72
PTPRE-202ENST00000306042 ADCY9O60503 1353 aa10.56□□□□□ -0.72
PTPRE-202ENST00000306042 CA8P35219 290 aa10.56□□□□□ -0.72
PTPRE-202ENST00000306042 CACNB3P54284 484 aa10.56□□□□□ -0.72
PTPRE-202ENST00000306042 MAP3K11Q16584 847 aa10.56□□□□□ -0.72
PTPRE-202ENST00000306042 TMEM232C9JQI7 657 aa10.56□□□□□ -0.72
PTPRE-202ENST00000306042 MCM7P33993 719 aa10.56□□□□□ -0.72
PTPRE-202ENST00000306042 POLA2Q14181 598 aa10.56□□□□□ -0.72
PTPRE-202ENST00000306042 KCTD2Q14681 263 aa10.56□□□□□ -0.72
PTPRE-202ENST00000306042 PPFIBP1Q86W92 1011 aa10.56□□□□□ -0.72
PTPRE-202ENST00000306042 CCAR2Q8N163 923 aaKnown RBP10.56□□□□□ -0.72
PTPRE-202ENST00000306042 CNOT7Q9UIV1 285 aaKnown RBP10.56□□□□□ -0.72
PTPRE-202ENST00000306042 DESP17661 470 aa10.56□□□□□ -0.72
PTPRE-202ENST00000306042 LMNB1P20700 586 aa10.56□□□□□ -0.72
PTPRE-202ENST00000306042 PRDX5P30044 214 aa10.56□□□□□ -0.72
PTPRE-202ENST00000306042 CAMK4Q16566 473 aa10.56□□□□□ -0.72
PTPRE-202ENST00000306042 DPP9Q86TI2 863 aa10.56□□□□□ -0.72
PTPRE-202ENST00000306042 MICALL2Q8IY33 904 aa10.56□□□□□ -0.72
PTPRE-202ENST00000306042 SPICE1Q8N0Z3 855 aa10.56□□□□□ -0.72
PTPRE-202ENST00000306042 STAT6P42226 847 aa10.55□□□□□ -0.72
PTPRE-202ENST00000306042 ZMYM1Q5SVZ6 1142 aa10.55□□□□□ -0.72
PTPRE-202ENST00000306042 CCDC70Q6NSX1 233 aa10.55□□□□□ -0.72
PTPRE-202ENST00000306042 KANK3Q6NY19 840 aa10.55□□□□□ -0.72
PTPRE-202ENST00000306042 SEPT11Q9NVA2 429 aaKnown RBP10.55□□□□□ -0.72
PTPRE-202ENST00000306042 JAKMIP3Q5VZ66 844 aa10.55□□□□□ -0.72
PTPRE-202ENST00000306042 PLA2G12BQ9BX93 195 aa10.55□□□□□ -0.72
PTPRE-202ENST00000306042 DEF6Q9H4E7 631 aa10.55□□□□□ -0.72
PTPRE-202ENST00000306042 SNX14Q9Y5W7 946 aa10.55□□□□□ -0.72
PTPRE-202ENST00000306042 TNKSO95271 1327 aa10.55□□□□□ -0.72
PTPRE-202ENST00000306042 SMTNL1A8MU46 457 aa10.55□□□□□ -0.72
PTPRE-202ENST00000306042 ECE1P42892 770 aa10.55□□□□□ -0.72
PTPRE-202ENST00000306042 CETN1Q12798 172 aa10.55□□□□□ -0.72
PTPRE-202ENST00000306042 LUC7LQ9NQ29 371 aaKnown RBP10.55□□□□□ -0.72
PTPRE-202ENST00000306042 MRPL11Q9Y3B7 192 aaKnown RBP10.55□□□□□ -0.72
PTPRE-202ENST00000306042 MYO5BQ9ULV0 1848 aa10.55□□□□□ -0.72
PTPRE-202ENST00000306042 ASNSP08243 561 aa10.55□□□□□ -0.72
PTPRE-202ENST00000306042 MTX1Q13505 466 aa10.55□□□□□ -0.72
PTPRE-202ENST00000306042 ZNF654Q8IZM8 581 aa10.55□□□□□ -0.72
PTPRE-202ENST00000306042 KCNG4Q8TDN1 519 aa10.55□□□□□ -0.72
PTPRE-202ENST00000306042 AZI2Q9H6S1 392 aa10.55□□□□□ -0.72
PTPRE-202ENST00000306042 FRMPD2Q68DX3 1309 aaPredicted RBP10.55□□□□□ -0.72
PTPRE-202ENST00000306042 DEKP35659 375 aaKnown RBP10.54□□□□□ -0.72
PTPRE-202ENST00000306042 MCAMP43121 646 aa10.54□□□□□ -0.72
PTPRE-202ENST00000306042 GSE1Q14687 1217 aa10.54□□□□□ -0.72
PTPRE-202ENST00000306042 TMED8Q6PL24 325 aaPredicted RBP10.54□□□□□ -0.72
PTPRE-202ENST00000306042 LCORLQ8N3X6 602 aa10.54□□□□□ -0.72
PTPRE-202ENST00000306042 WRNIP1Q96S55 665 aa10.54□□□□□ -0.72
PTPRE-202ENST00000306042 ZNF341Q9BYN7 854 aa10.54□□□□□ -0.72
PTPRE-202ENST00000306042 STAP2Q9UGK3 403 aa10.54□□□□□ -0.72
PTPRE-202ENST00000306042 PNMA3Q9UL41 463 aa10.54□□□□□ -0.72
PTPRE-202ENST00000306042 TTLL1O95922 423 aa10.54□□□□□ -0.72
PTPRE-202ENST00000306042 POTEJP0CG39 1038 aa10.54□□□□□ -0.72
PTPRE-202ENST00000306042 ZSCAN22P10073 491 aaPredicted RBP10.54□□□□□ -0.72
PTPRE-202ENST00000306042 FOXO4P98177 505 aa10.54□□□□□ -0.72
PTPRE-202ENST00000306042 GNPTABQ3T906 1256 aa10.54□□□□□ -0.72
PTPRE-202ENST00000306042 STRIP1Q5VSL9 837 aa10.54□□□□□ -0.72
PTPRE-202ENST00000306042 DTHD1Q6ZMT9 781 aa10.54□□□□□ -0.72
PTPRE-202ENST00000306042 DRC1Q96MC2 740 aa10.54□□□□□ -0.72
PTPRE-202ENST00000306042 PIH1D3Q9NQM4 214 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms